Miyakogusa Predicted Gene
- Lj2g3v1549610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1549610.1 tr|I3RZX6|I3RZX6_LOTJA ATP-dependent Clp protease
proteolytic subunit OS=Lotus japonicus PE=2
SV=1,100,0,CLPPROTEASEP,ClpP; CLP_protease,ClpP/TepA;
ClpP/crotonase,NULL; ATP-DEPENDENT CLP PROTEASE PROTEOLYT,CUFF.37397.1
(158 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g026840.1 | ATP-dependent Clp protease proteolytic protein... 250 4e-67
Medtr7g082980.1 | ATP-dependent Clp protease proteolytic protein... 148 2e-36
Medtr1g086940.1 | ATP-dependent Clp protease proteolytic protein... 139 1e-33
Medtr7g109610.1 | ATP-dependent Clp protease proteolytic protein... 139 2e-33
Medtr4g075100.1 | ATP-dependent Clp protease proteolytic protein... 115 1e-26
Medtr4g069800.2 | ATP-dependent Clp protease proteolytic protein... 112 1e-25
Medtr4g069800.1 | ATP-dependent Clp protease proteolytic protein... 112 2e-25
Medtr4g034690.1 | ATP-dependent Clp protease proteolytic protein... 96 1e-20
Medtr0002s0730.1 | ATP-dependent Clp protease proteolytic protei... 94 5e-20
Medtr7g112640.1 | ATP-dependent Clp protease proteolytic protein... 91 4e-19
Medtr4g099360.1 | ATP-dependent Clp protease proteolytic protein... 86 1e-17
Medtr4g102000.1 | ATP-dependent Clp protease proteolytic protein... 80 8e-16
Medtr1g106550.1 | ATP-dependent Clp protease proteolytic protein... 77 7e-15
Medtr4g069800.3 | ATP-dependent Clp protease proteolytic protein... 69 2e-12
>Medtr5g026840.1 | ATP-dependent Clp protease proteolytic protein |
HC | chr5:11082961-11087797 | 20130731
Length = 297
Score = 250 bits (638), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/158 (79%), Positives = 135/158 (85%), Gaps = 4/158 (2%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
MAIYDAVQLVRADVSTIA+GI+ASTASIILGGGTKGKR AMPNTRIMI QP GGASGQAI
Sbjct: 144 MAIYDAVQLVRADVSTIAMGISASTASIILGGGTKGKRLAMPNTRIMIAQPPGGASGQAI 203
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDKES 120
DVEIQAKE+MHNKNNV+RIIS FTGR+ EQV KDIDRDRY+SPIEAVEYGIIDGVID+E
Sbjct: 204 DVEIQAKEIMHNKNNVSRIISSFTGRSLEQVLKDIDRDRYLSPIEAVEYGIIDGVIDREM 263
Query: 121 IIPLEPVPERVRSTLNYEEISKDPRKFLTPEIPDDEIY 158
IIPL PVPE+V + D FL P IPDDEIY
Sbjct: 264 IIPLLPVPEKVEEA----TLKIDDADFLNPHIPDDEIY 297
>Medtr7g082980.1 | ATP-dependent Clp protease proteolytic protein |
HC | chr7:31837077-31843069 | 20130731
Length = 297
Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
M +YDA++L +ADVST+ LG+AAS + +L GTKGKR+ MPN+R+MIHQPLG A G+A
Sbjct: 135 MGVYDAMKLCKADVSTVCLGLAASMGAFLLAAGTKGKRYCMPNSRVMIHQPLGSAGGKAT 194
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 117
++ I+A+E+M++K + +I+S TG+ EQ++ D DRD +M+P EA EYG+ID VID
Sbjct: 195 EMSIRARELMYHKIKINKILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLIDDVID 251
>Medtr1g086940.1 | ATP-dependent Clp protease proteolytic protein |
HC | chr1:38915594-38921560 | 20130731
Length = 304
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 88/116 (75%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
MAI+D ++ +R DVST+ +G+AAS + +L GTKGKRF++PN+RIMIHQPLGG G
Sbjct: 167 MAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGTKGKRFSLPNSRIMIHQPLGGFQGGQT 226
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 116
D++IQA E++H+K N+ +S TG++ E++ +D DRD +MS EA EYG+IDGVI
Sbjct: 227 DIDIQANEMLHHKANLNGYLSYQTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 282
>Medtr7g109610.1 | ATP-dependent Clp protease proteolytic protein |
HC | chr7:44857617-44853379 | 20130731
Length = 301
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
MAI+D ++ +R DVST+ +G+AAS + +L GTKGKR+++PN+RIMIHQPLGG G
Sbjct: 164 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGFQGGQT 223
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDK-- 118
D++IQA E++H+K N+ +S TG++ E++ +D DRD +MS EA EYG+IDGVI
Sbjct: 224 DIDIQANEMLHHKANLNGYLSYQTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVITNPL 283
Query: 119 ESIIPLEPVPE 129
+++ PL E
Sbjct: 284 KALQPLASAAE 294
>Medtr4g075100.1 | ATP-dependent Clp protease proteolytic protein |
HC | chr4:28664404-28660842 | 20130731
Length = 238
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 81/118 (68%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
+AIYD +Q +R+ ++TI LG AAS S++L G KG+R A+PN IMIHQP GG SGQA
Sbjct: 101 LAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIMIHQPSGGYSGQAK 160
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDK 118
D+ I K+++ + + + TG+ + +QK++DRD +M+ EA E+GIID VID+
Sbjct: 161 DIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAKEFGIIDEVIDQ 218
>Medtr4g069800.2 | ATP-dependent Clp protease proteolytic protein |
HC | chr4:26245605-26250350 | 20130731
Length = 242
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 78/119 (65%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
+AIYD + ++ V T+ G+AAS +++L GG KG R++MPN RIMI+QP G G
Sbjct: 123 LAIYDCMSWIKPKVGTVCFGVAASQGTLLLAGGEKGMRYSMPNARIMINQPQCGFGGHVE 182
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDKE 119
DV E + ++ + ++ S FTG+ E+VQ+ +RD ++S EA+E+G+IDGV++ E
Sbjct: 183 DVRRLVNESVQSRYKMEKMFSAFTGQALEKVQEYTERDSFLSVSEALEFGLIDGVLETE 241
>Medtr4g069800.1 | ATP-dependent Clp protease proteolytic protein |
HC | chr4:26245523-26250401 | 20130731
Length = 274
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 78/119 (65%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
+AIYD + ++ V T+ G+AAS +++L GG KG R++MPN RIMI+QP G G
Sbjct: 155 LAIYDCMSWIKPKVGTVCFGVAASQGTLLLAGGEKGMRYSMPNARIMINQPQCGFGGHVE 214
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDKE 119
DV E + ++ + ++ S FTG+ E+VQ+ +RD ++S EA+E+G+IDGV++ E
Sbjct: 215 DVRRLVNESVQSRYKMEKMFSAFTGQALEKVQEYTERDSFLSVSEALEFGLIDGVLETE 273
>Medtr4g034690.1 | ATP-dependent Clp protease proteolytic protein |
HC | chr4:18333696-18332187 | 20130731
Length = 195
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGA-SGQA 59
MAI+D +Q+V A+V T+ +G+AAS S++L GG KR A P+ R+MIHQP GQ
Sbjct: 78 MAIFDIMQVVEAEVHTVCVGLAASMGSLLLVGGEFTKRLAFPHLRVMIHQPATSLYEGQV 137
Query: 60 IDVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGV 115
+ ++A+E++ + +T I + TG+ Q+ +D++RD +MS EA +GI+D V
Sbjct: 138 GECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEEAEAHGIVDTV 193
>Medtr0002s0730.1 | ATP-dependent Clp protease proteolytic protein |
HC | scaffold0002:268560-267910 | 20130731
Length = 216
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGG-ASGQA 59
MAI+D +Q V D+ TI LGIAAS AS IL GG KR A P+ RIM+HQP +
Sbjct: 78 MAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPAKRIAFPHARIMLHQPASAYYRART 137
Query: 60 IDVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDK 118
+ ++ +E+ + +TR+ + TG+ F V +D++RD +MS EA YG++D V D+
Sbjct: 138 PEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIVGDE 196
>Medtr7g112640.1 | ATP-dependent Clp protease proteolytic protein |
HC | chr7:46332121-46337643 | 20130731
Length = 322
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 78/132 (59%), Gaps = 2/132 (1%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASG--Q 58
AIYDA+ ++ +++T+ALG A A ++L GTKG+R+ P+ + MI QP +SG
Sbjct: 175 FAIYDAMMQMKTEINTVALGAAVGQACLLLSAGTKGRRYMTPHAKAMIQQPRVPSSGLRP 234
Query: 59 AIDVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDK 118
A DV I AKEVM N++ + ++++ T + E V + R YM + A E+G+ID ++ +
Sbjct: 235 ASDVLIHAKEVMVNRDTLVKLLAKHTENSEETVSNVMKRSYYMDALLAKEFGVIDKILWR 294
Query: 119 ESIIPLEPVPER 130
+ VP R
Sbjct: 295 GQEKIMADVPSR 306
>Medtr4g099360.1 | ATP-dependent Clp protease proteolytic protein |
HC | chr4:41221585-41229590 | 20130731
Length = 304
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 75/119 (63%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
+A+YD ++ ++ + T+ +G A A+++L G KG R A+P++ IMI QP+ GQA
Sbjct: 168 LAVYDLMRYIKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQGQAT 227
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDKE 119
DV + KE+ K + +++ T +T EQ++ DI R +Y SP EAVEYGIID V+ E
Sbjct: 228 DVNLARKEITRVKTELVNLLAKHTEKTPEQIEADIRRPKYFSPTEAVEYGIIDKVLYNE 286
>Medtr4g102000.1 | ATP-dependent Clp protease proteolytic protein |
HC | chr4:42213779-42209674 | 20130731
Length = 320
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 71/121 (58%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
M++YD +Q ++ + T +G A A+ +L G KG R AMP RI+I P G A G+A
Sbjct: 186 MSLYDTMQSLQTPICTHCIGQAYGLAAFLLAAGEKGNRTAMPLARIVIQSPAGAARGRAD 245
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDKES 120
D++ +A E++ ++ + ++ TG+ E++ +D+ R + EA++YG+ID ++
Sbjct: 246 DIQNEAAELLRIRDYLFTELANKTGQPVEKITEDLKRVKRFDAQEALDYGLIDKIVRPRR 305
Query: 121 I 121
I
Sbjct: 306 I 306
>Medtr1g106550.1 | ATP-dependent Clp protease proteolytic protein |
HC | chr1:48173405-48168670 | 20130731
Length = 373
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 2 AIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQP-LGGASGQAI 60
+I D + +++DV T+ L +A A++IL G KG R +P++ + P + +SG
Sbjct: 221 SIADMISHIKSDVYTVNLAMAYGQAAMILSLGKKGYRAVLPHSSAKVFLPKVHRSSGSVA 280
Query: 61 DVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 116
D+ I+AKE+ N +++ TG++ E++ KD+ R RY P +A+EYG+ D ++
Sbjct: 281 DMWIKAKELEANSEYYIELLAKGTGKSKEEIAKDVQRTRYFQPQDAIEYGLADKIM 336
>Medtr4g069800.3 | ATP-dependent Clp protease proteolytic protein |
HC | chr4:26245605-26248939 | 20130731
Length = 237
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 1 MAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAI 60
+AIYD + ++ V T+ G+AAS +++L GG KG R++MPN RIMI+QP G G
Sbjct: 155 LAIYDCMSWIKPKVGTVCFGVAASQGTLLLAGGEKGMRYSMPNARIMINQPQCGFGGHVE 214
Query: 61 DVEIQAKEVMHNK 73
DV E + ++
Sbjct: 215 DVRRLVNESVQSR 227