Miyakogusa Predicted Gene

Lj2g3v1437080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1437080.1 tr|B9H2R7|B9H2R7_POPTR AP2/ERF domain-containing
transcription factor OS=Populus trichocarpa
GN=ERF4,72.58,2e-19,DNA-binding domain in plant proteins such
as,AP2/ERF domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NA,CUFF.37053.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g032820.1 | AP2 domain class transcription factor | HC | c...    70   4e-13
Medtr8g069360.1 | AP2 domain class transcription factor | LC | c...    68   3e-12
Medtr7g084370.1 | AP2 domain class transcription factor | HC | c...    60   5e-10
Medtr4g119270.1 | ethylene response factor | HC | chr4:49385473-...    59   1e-09
Medtr2g019750.1 | AP2 domain class transcription factor | HC | c...    57   4e-09
Medtr2g014300.1 | ethylene response factor | HC | chr2:4034815-4...    51   2e-07
Medtr2g078680.1 | AP2 domain class transcription factor | HC | c...    50   7e-07
Medtr4g078710.1 | ethylene response factor | HC | chr4:30413146-...    50   8e-07
Medtr2g014340.1 | ethylene response factor | HC | chr2:4068415-4...    49   1e-06
Medtr3g053690.1 | ethylene response factor | HC | chr3:21358224-...    48   3e-06
Medtr6g037610.1 | AP2 domain class transcription factor | HC | c...    47   7e-06

>Medtr5g032820.1 | AP2 domain class transcription factor | HC |
           chr5:14158435-14159523 | 20130731
          Length = 362

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 56/139 (40%), Gaps = 17/139 (12%)

Query: 1   MEEALRLLNGV------EPDQXXXXXXXXXXXXRENXXXXXXXXXXXXXXXXXXXXYAAE 54
           MEEAL  LNG       EPD               +                    YAAE
Sbjct: 1   MEEALNRLNGTTPPTIQEPDTKKSTNKRTSRDNTASAAGGGGALRYRGVRRRPWGRYAAE 60

Query: 55  IRDPHSKERRWLGTFDTXXXXXXXXXXXXXXMRGAKARTNFVYXXXXXXXXXXXXXXHHL 114
           IRDP SKERRWLGTFDT              MRG KARTNFVY                 
Sbjct: 61  IRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPPPNTTF------- 113

Query: 115 FPPTFNFPK--QPFNKTTT 131
             P+FNFPK  Q F KT+T
Sbjct: 114 --PSFNFPKHSQAFEKTST 130


>Medtr8g069360.1 | AP2 domain class transcription factor | LC |
           chr8:29032439-29035365 | 20130731
          Length = 430

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/47 (65%), Positives = 32/47 (68%)

Query: 51  YAAEIRDPHSKERRWLGTFDTXXXXXXXXXXXXXXMRGAKARTNFVY 97
           YAAEIRDPHSKERRWLGTFDT              MRG+KARTNF Y
Sbjct: 55  YAAEIRDPHSKERRWLGTFDTAEQAACAYDSAALSMRGSKARTNFFY 101


>Medtr7g084370.1 | AP2 domain class transcription factor | HC |
          chr7:32558339-32557164 | 20130731
          Length = 282

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 31/47 (65%)

Query: 51 YAAEIRDPHSKERRWLGTFDTXXXXXXXXXXXXXXMRGAKARTNFVY 97
          YAAEIRDP +KER WLGTFDT              MRG++ARTNFVY
Sbjct: 53 YAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARGMRGSRARTNFVY 99


>Medtr4g119270.1 | ethylene response factor | HC |
           chr4:49385473-49386669 | 20130731
          Length = 340

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 30/47 (63%)

Query: 51  YAAEIRDPHSKERRWLGTFDTXXXXXXXXXXXXXXMRGAKARTNFVY 97
           YAAEIRDP +KER WLGTFDT              M+G +ARTNF+Y
Sbjct: 64  YAAEIRDPTTKERHWLGTFDTAQEAALAYDRAAISMKGNQARTNFIY 110


>Medtr2g019750.1 | AP2 domain class transcription factor | HC |
           chr2:6507974-6506699 | 20130731
          Length = 296

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 30/47 (63%)

Query: 51  YAAEIRDPHSKERRWLGTFDTXXXXXXXXXXXXXXMRGAKARTNFVY 97
           YAAEIRDP +KER WLGTFDT              ++G+ ARTNF+Y
Sbjct: 61  YAAEIRDPATKERHWLGTFDTAQEAAFAYDRAALSIKGSNARTNFIY 107


>Medtr2g014300.1 | ethylene response factor | HC |
          chr2:4034815-4036032 | 20130731
          Length = 172

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 27/45 (60%)

Query: 51 YAAEIRDPHSKERRWLGTFDTXXXXXXXXXXXXXXMRGAKARTNF 95
          YAAEIRDP  K R WLGTFDT              +RGAKA+TNF
Sbjct: 26 YAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAKTNF 70


>Medtr2g078680.1 | AP2 domain class transcription factor | HC |
          chr2:32868025-32866460 | 20130731
          Length = 206

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 26/45 (57%)

Query: 51 YAAEIRDPHSKERRWLGTFDTXXXXXXXXXXXXXXMRGAKARTNF 95
          YAAEIRDP  K R WLGTFDT               RG+KA+TNF
Sbjct: 42 YAAEIRDPGKKTRVWLGTFDTAEEAARAYDKAAREFRGSKAKTNF 86


>Medtr4g078710.1 | ethylene response factor | HC |
          chr4:30413146-30411899 | 20130731
          Length = 218

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 25/45 (55%)

Query: 51 YAAEIRDPHSKERRWLGTFDTXXXXXXXXXXXXXXMRGAKARTNF 95
          YAAEIRDP  K R WLGTFDT               RG KA+TNF
Sbjct: 39 YAAEIRDPGKKSRVWLGTFDTAEEAARAYDNAARQFRGPKAKTNF 83


>Medtr2g014340.1 | ethylene response factor | HC |
          chr2:4068415-4067342 | 20130731
          Length = 200

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 26/47 (55%)

Query: 51 YAAEIRDPHSKERRWLGTFDTXXXXXXXXXXXXXXMRGAKARTNFVY 97
          YAAEIRDP  K R WLGTFDT               RG KA+TNF +
Sbjct: 30 YAAEIRDPGKKSRVWLGTFDTAEEAARAYDSAARQFRGPKAKTNFPF 76


>Medtr3g053690.1 | ethylene response factor | HC |
          chr3:21358224-21361945 | 20130731
          Length = 225

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 26/45 (57%)

Query: 51 YAAEIRDPHSKERRWLGTFDTXXXXXXXXXXXXXXMRGAKARTNF 95
          +AAEIRDP  K R WLGTFDT              +RG KA+TNF
Sbjct: 38 FAAEIRDPLKKARVWLGTFDTAEQAARAYDTAARNLRGPKAKTNF 82


>Medtr6g037610.1 | AP2 domain class transcription factor | HC |
           chr6:13408028-13410902 | 20130731
          Length = 405

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 26/45 (57%)

Query: 51  YAAEIRDPHSKERRWLGTFDTXXXXXXXXXXXXXXMRGAKARTNF 95
           +AAEIRDPH  +R WLGTFDT               RG++A+ NF
Sbjct: 191 WAAEIRDPHKAQRVWLGTFDTAEAAARAYDEAALRFRGSRAKLNF 235