Miyakogusa Predicted Gene

Lj2g3v1378940.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1378940.2 Non Characterized Hit- tr|F6HPM5|F6HPM5_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,42.37,4e-19,NHL
REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT NAMED,NULL; NHL,NHL repeat;
Calcium-dependent phospho,CUFF.36903.2
         (152 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g034750.1 | NHL repeat protein | HC | chr5:15072581-150770...   279   9e-76
Medtr8g063760.1 | NHL repeat protein | HC | chr8:26718504-267142...   276   5e-75
Medtr6g007720.1 | NHL repeat protein | HC | chr6:1850293-1854343...   183   5e-47
Medtr2g075860.1 | NHL repeat protein | HC | chr2:31740677-317353...   150   4e-37
Medtr5g034550.1 | NHL repeat protein | HC | chr5:15003202-150038...   142   2e-34
Medtr8g058630.1 | NHL repeat protein | HC | chr8:20081350-200803...   129   1e-30
Medtr8g063700.1 | plant/T23E23-13 protein, putative | HC | chr8:...    91   4e-19

>Medtr5g034750.1 | NHL repeat protein | HC | chr5:15072581-15077047
           | 20130731
          Length = 560

 Score =  279 bits (713), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 137/154 (88%), Positives = 142/154 (92%), Gaps = 3/154 (1%)

Query: 1   MNHPKGITVDDRGNIYVADITNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDD 60
           MNHPKGITVDDRGNIYVADI NMAIRKISDSGVTTIAGGK SRGGGHVDGPSEEAKFS+D
Sbjct: 145 MNHPKGITVDDRGNIYVADIMNMAIRKISDSGVTTIAGGKLSRGGGHVDGPSEEAKFSND 204

Query: 61  FDVVYVGSSCSLLIIDRGNQAIREIQLHFDDCAYQYGSGFPLGVAMLVGAGFFGYMLALL 120
           FDVVYVGSSCSLL+IDRGNQAIREIQL FDDCAYQY SGFPLG+AML+GAGFFGYMLALL
Sbjct: 205 FDVVYVGSSCSLLVIDRGNQAIREIQLRFDDCAYQYESGFPLGIAMLLGAGFFGYMLALL 264

Query: 121 QRRLSTIVASQD---AEGPSMSGISPIPYQKPLK 151
           QRRLSTIVASQD   AE  +MS  SP PYQKPLK
Sbjct: 265 QRRLSTIVASQDMTLAESSAMSDFSPSPYQKPLK 298


>Medtr8g063760.1 | NHL repeat protein | HC | chr8:26718504-26714203
           | 20130731
          Length = 521

 Score =  276 bits (706), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 133/153 (86%), Positives = 139/153 (90%), Gaps = 2/153 (1%)

Query: 1   MNHPKGITVDDRGNIYVADITNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDD 60
           MNHPKGITVDDRGNIYVAD  NMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDD
Sbjct: 148 MNHPKGITVDDRGNIYVADTANMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDD 207

Query: 61  FDVVYVGSSCSLLIIDRGNQAIREIQLHFDDCAYQYGSGFPLGVAMLVGAGFFGYMLALL 120
           FDVVYVGSSCSLL++DRGNQAIREIQLHFDDCAY+YGS FPLG+AMLVGAGFFGYMLALL
Sbjct: 208 FDVVYVGSSCSLLVVDRGNQAIREIQLHFDDCAYRYGSDFPLGIAMLVGAGFFGYMLALL 267

Query: 121 QRRLSTIVASQDAEGP--SMSGISPIPYQKPLK 151
           QRRL TIV SQDA+ P   M  +S   YQKPLK
Sbjct: 268 QRRLGTIVESQDAQVPLTVMPSVSRSTYQKPLK 300


>Medtr6g007720.1 | NHL repeat protein | HC | chr6:1850293-1854343 |
           20130731
          Length = 562

 Score =  183 bits (465), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 110/142 (77%), Gaps = 10/142 (7%)

Query: 1   MNHPKGITVDDRGNIYVADITNMAIRKISDSGVTTIAGGKWSRGGG-HVDGPSEEAKFSD 59
           +NHPKG+TVDD GNIY+AD  NMAIRKISD GVTTIAGG      G HVDGPSE+AKFS+
Sbjct: 145 LNHPKGLTVDDSGNIYIADTLNMAIRKISDEGVTTIAGGGKRGQLGGHVDGPSEDAKFSN 204

Query: 60  DFDVVYVGSSCSLLIIDRGNQAIREIQLHFDDC---------AYQYGSGFPLGVAMLVGA 110
           DFD++Y  SSCSLL+ DRGNQAIREIQL+ DDC          Y+Y + FPLG+A LV A
Sbjct: 205 DFDLIYARSSCSLLVDDRGNQAIREIQLNQDDCITSTTTTNDEYEYDNSFPLGIAALVSA 264

Query: 111 GFFGYMLALLQRRLSTIVASQD 132
           GFFGYMLALL+RR++ + +S D
Sbjct: 265 GFFGYMLALLKRRVTDMFSSSD 286


>Medtr2g075860.1 | NHL repeat protein | HC | chr2:31740677-31735332
           | 20130731
          Length = 493

 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 92/122 (75%), Gaps = 1/122 (0%)

Query: 1   MNHPKGITVDDRGNIYVADITNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDD 60
            NHPKGIT+DD+GN+YVAD  N+AIRKI D+GVTTIAGGK S   G+ DGPSE+AKFS+D
Sbjct: 142 FNHPKGITMDDKGNVYVADTQNLAIRKIGDAGVTTIAGGK-SNVAGYRDGPSEDAKFSND 200

Query: 61  FDVVYVGSSCSLLIIDRGNQAIREIQLHFDDCAYQYGSGFPLGVAMLVGAGFFGYMLALL 120
           FDVVYV  +CSLL+IDRGN A+R+I L  +DC YQ  S     + ++VGA   GY   +L
Sbjct: 201 FDVVYVRPTCSLLVIDRGNAALRKIILDQEDCDYQSSSISSTDILIVVGAVLVGYATCML 260

Query: 121 QR 122
           Q+
Sbjct: 261 QQ 262


>Medtr5g034550.1 | NHL repeat protein | HC | chr5:15003202-15003898
           | 20130731
          Length = 154

 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/130 (60%), Positives = 85/130 (65%), Gaps = 19/130 (14%)

Query: 1   MNHPKGITVDDRGNIYVADITNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDD 60
           MNHPKGITVDDRGNIYVADI NMAIRKIS     T     +          S    +   
Sbjct: 28  MNHPKGITVDDRGNIYVADIINMAIRKISLGNNMTYLSFLYE--------ESLILFYLLL 79

Query: 61  FDVVYVGSSCSLLIIDRGNQAIREIQLHFDDCAYQYGSGFPLG-----------VAMLVG 109
           FDV+YVGSS SLL+IDRG QAIREIQL FDDCAYQY S FPLG           +AMLVG
Sbjct: 80  FDVIYVGSSYSLLVIDRGKQAIREIQLRFDDCAYQYESRFPLGKLNKFKVCLYRIAMLVG 139

Query: 110 AGFFGYMLAL 119
           AGFFGYM+A 
Sbjct: 140 AGFFGYMMAF 149


>Medtr8g058630.1 | NHL repeat protein | HC | chr8:20081350-20080362
           | 20130731
          Length = 150

 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/114 (57%), Positives = 83/114 (72%), Gaps = 1/114 (0%)

Query: 1   MNHPKGITVDDRGNIYVADITNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDD 60
            ++PKGI +DD+GN+YVAD  NMAIRKI D+GVTTIAGGK S   G+ DGP E+AK S+D
Sbjct: 38  FHYPKGIALDDKGNVYVADTQNMAIRKIGDAGVTTIAGGK-SNVAGYRDGPGEDAKLSND 96

Query: 61  FDVVYVGSSCSLLIIDRGNQAIREIQLHFDDCAYQYGSGFPLGVAMLVGAGFFG 114
           FDVVY+  +CSLL+IDRGN A+R+I L+ +DC YQ  S    G+      G FG
Sbjct: 97  FDVVYIRPTCSLLVIDRGNAALRQIFLNQEDCNYQSSSISLTGLNSKSLFGMFG 150


>Medtr8g063700.1 | plant/T23E23-13 protein, putative | HC |
           chr8:26697994-26701680 | 20130731
          Length = 384

 Score = 90.9 bits (224), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 3/112 (2%)

Query: 1   MNHPKGITVDDRGNIYVADITNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDD 60
            + P+   VD RGN+YVAD  N  IRKIS +GVTTIAGG  S      DGP++ A FS+D
Sbjct: 105 FDKPRSFAVDFRGNVYVADRVNKVIRKISTNGVTTIAGGS-SEKSSIKDGPAQNASFSND 163

Query: 61  FDVVYVGSSCSLLIIDRGNQAIREIQLHFDDCAYQYGSGFPLGVAMLVGAGF 112
           F++ ++ + C+LL+ D  +Q + +I L  +DC    GS   LG  M    G 
Sbjct: 164 FELTFIPALCALLVSDHMHQLVHQINLKEEDCT--LGSKSALGAVMTWTLGL 213