Miyakogusa Predicted Gene

Lj2g3v0878890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0878890.1 tr|B9H976|B9H976_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1080900 PE=4 SV=1,62.9,7e-16,
,NODE_91793_length_285_cov_7.677193.path1.1
         (63 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g088825.3 | peptidase M28 family protein | HC | chr6:33979...   108   1e-24
Medtr6g088825.1 | peptidase M28 family protein | HC | chr6:33979...   108   1e-24
Medtr6g088825.4 | peptidase M28 family protein | HC | chr6:33979...   107   2e-24
Medtr6g088825.5 | peptidase M28 family protein | HC | chr6:33979...   107   2e-24
Medtr6g088825.2 | peptidase M28 family protein | HC | chr6:33979...   107   2e-24

>Medtr6g088825.3 | peptidase M28 family protein | HC |
           chr6:33979536-33985689 | 20130731
          Length = 611

 Score =  108 bits (269), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 59/62 (95%)

Query: 1   MSGEDGDKILKSTGAPVAKDDWQGSQDAPTYRIGPGPGILHLNYTGQDIIATIQNVIGVI 60
           +SGEDG+KI++S G PVA+DDWQGS+DAPTYR+GPGPGIL+L+YTGQ +IATIQNVIGVI
Sbjct: 271 VSGEDGEKIIRSIGGPVAEDDWQGSKDAPTYRVGPGPGILNLSYTGQQVIATIQNVIGVI 330

Query: 61  EG 62
           EG
Sbjct: 331 EG 332


>Medtr6g088825.1 | peptidase M28 family protein | HC |
           chr6:33979638-33985084 | 20130731
          Length = 704

 Score =  108 bits (269), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 59/62 (95%)

Query: 1   MSGEDGDKILKSTGAPVAKDDWQGSQDAPTYRIGPGPGILHLNYTGQDIIATIQNVIGVI 60
           +SGEDG+KI++S G PVA+DDWQGS+DAPTYR+GPGPGIL+L+YTGQ +IATIQNVIGVI
Sbjct: 271 VSGEDGEKIIRSIGGPVAEDDWQGSKDAPTYRVGPGPGILNLSYTGQQVIATIQNVIGVI 330

Query: 61  EG 62
           EG
Sbjct: 331 EG 332


>Medtr6g088825.4 | peptidase M28 family protein | HC |
           chr6:33979536-33985689 | 20130731
          Length = 569

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 59/62 (95%)

Query: 1   MSGEDGDKILKSTGAPVAKDDWQGSQDAPTYRIGPGPGILHLNYTGQDIIATIQNVIGVI 60
           +SGEDG+KI++S G PVA+DDWQGS+DAPTYR+GPGPGIL+L+YTGQ +IATIQNVIGVI
Sbjct: 271 VSGEDGEKIIRSIGGPVAEDDWQGSKDAPTYRVGPGPGILNLSYTGQQVIATIQNVIGVI 330

Query: 61  EG 62
           EG
Sbjct: 331 EG 332


>Medtr6g088825.5 | peptidase M28 family protein | HC |
           chr6:33979536-33985689 | 20130731
          Length = 569

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 59/62 (95%)

Query: 1   MSGEDGDKILKSTGAPVAKDDWQGSQDAPTYRIGPGPGILHLNYTGQDIIATIQNVIGVI 60
           +SGEDG+KI++S G PVA+DDWQGS+DAPTYR+GPGPGIL+L+YTGQ +IATIQNVIGVI
Sbjct: 271 VSGEDGEKIIRSIGGPVAEDDWQGSKDAPTYRVGPGPGILNLSYTGQQVIATIQNVIGVI 330

Query: 61  EG 62
           EG
Sbjct: 331 EG 332


>Medtr6g088825.2 | peptidase M28 family protein | HC |
           chr6:33979536-33985689 | 20130731
          Length = 569

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 59/62 (95%)

Query: 1   MSGEDGDKILKSTGAPVAKDDWQGSQDAPTYRIGPGPGILHLNYTGQDIIATIQNVIGVI 60
           +SGEDG+KI++S G PVA+DDWQGS+DAPTYR+GPGPGIL+L+YTGQ +IATIQNVIGVI
Sbjct: 271 VSGEDGEKIIRSIGGPVAEDDWQGSKDAPTYRVGPGPGILNLSYTGQQVIATIQNVIGVI 330

Query: 61  EG 62
           EG
Sbjct: 331 EG 332