Miyakogusa Predicted Gene

Lj1g3v4998360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4998360.1 Non Characterized Hit- tr|K3ZJU5|K3ZJU5_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si026850,60.76,1e-18,SSXT,SSXT; seg,NULL; SYNOVIAL SARCOMA
ASSOCIATED SS18 PROTEIN,SSXT,CUFF.33788.1
         (220 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g080590.1 | GRF1-interacting factor-like protein | HC | ch...   150   6e-37
Medtr7g115410.1 | SSXT protein (amine-terminal region) protein |...   111   4e-25
Medtr8g024650.3 | GRF1-interacting factor-like protein | HC | ch...    94   1e-19
Medtr8g024650.1 | GRF1-interacting factor-like protein | HC | ch...    94   1e-19
Medtr8g024650.2 | GRF1-interacting factor-like protein | HC | ch...    94   1e-19
Medtr3g097190.1 | hypothetical protein | LC | chr3:44550859-4454...    61   7e-10
Medtr3g092260.1 | SSXT protein (amine-terminal region) protein |...    59   3e-09
Medtr1g080590.2 | GRF1-interacting factor-like protein | HC | ch...    50   2e-06

>Medtr1g080590.1 | GRF1-interacting factor-like protein | HC |
          chr1:35838257-35836013 | 20130731
          Length = 211

 Score =  150 bits (380), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 70/74 (94%), Positives = 72/74 (97%)

Query: 13 AAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQARLQRNLMYLAAIADSQ 72
          AAYYPNNVTTDHIQQYLDENKSLILKIVESQN+GKLTECAENQ+RLQRNLMYLAAIADSQ
Sbjct: 13 AAYYPNNVTTDHIQQYLDENKSLILKIVESQNTGKLTECAENQSRLQRNLMYLAAIADSQ 72

Query: 73 PQPPNMPGQYPSGG 86
          PQPP MPGQYPS G
Sbjct: 73 PQPPTMPGQYPSSG 86


>Medtr7g115410.1 | SSXT protein (amine-terminal region) protein |
          HC | chr7:47687065-47688259 | 20130731
          Length = 218

 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/60 (91%), Positives = 57/60 (95%), Gaps = 1/60 (1%)

Query: 26 QQYLDENKSLILKIVESQNSGKLTECAENQARLQRNLMYLAAIADSQPQPPNMPG-QYPS 84
          +QYLDENKSLILKIVESQNSGKL+ECAENQARLQRNLMYLAAIADSQPQPP M G QYPS
Sbjct: 16 KQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPTMAGQQYPS 75


>Medtr8g024650.3 | GRF1-interacting factor-like protein | HC |
          chr8:9109643-9113372 | 20130731
          Length = 213

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 18 NNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQARLQRNLMYLAAIADSQPQPPN 77
           N+TT+ IQ+YLDENK LIL I+++QN GKL ECA+ QA+LQ+NLMYLAAIAD+QPQ P 
Sbjct: 18 TNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPA 77

Query: 78 MPGQ 81
          +P Q
Sbjct: 78 LPPQ 81


>Medtr8g024650.1 | GRF1-interacting factor-like protein | HC |
          chr8:9109643-9113372 | 20130731
          Length = 213

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 18 NNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQARLQRNLMYLAAIADSQPQPPN 77
           N+TT+ IQ+YLDENK LIL I+++QN GKL ECA+ QA+LQ+NLMYLAAIAD+QPQ P 
Sbjct: 18 TNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPA 77

Query: 78 MPGQ 81
          +P Q
Sbjct: 78 LPPQ 81


>Medtr8g024650.2 | GRF1-interacting factor-like protein | HC |
          chr8:9109643-9113372 | 20130731
          Length = 213

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 18 NNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQARLQRNLMYLAAIADSQPQPPN 77
           N+TT+ IQ+YLDENK LIL I+++QN GKL ECA+ QA+LQ+NLMYLAAIAD+QPQ P 
Sbjct: 18 TNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPA 77

Query: 78 MPGQ 81
          +P Q
Sbjct: 78 LPPQ 81


>Medtr3g097190.1 | hypothetical protein | LC |
           chr3:44550859-44549778 | 20130731
          Length = 182

 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/49 (61%), Positives = 35/49 (71%)

Query: 38  KIVESQNSGKLTECAENQARLQRNLMYLAAIADSQPQPPNMPGQYPSGG 86
           ++V    S ++ E AENQ+ L RNLM LAAIADSQPQPP   GQYPS G
Sbjct: 69  ELVWFNLSTEMIEAAENQSSLLRNLMCLAAIADSQPQPPTTTGQYPSSG 117


>Medtr3g092260.1 | SSXT protein (amine-terminal region) protein |
          HC | chr3:42152282-42149249 | 20130731
          Length = 189

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 39/55 (70%)

Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQARLQRNLMYLAAIADSQPQ 74
          +TT+ IQ+ L+EN+ LI+KI+E Q  GK +E    QA+LQ NL +LA +AD  PQ
Sbjct: 11 LTTEQIQKCLEENEELIMKILEGQKQGKHSELGPYQAKLQHNLTFLAKLADFGPQ 65


>Medtr1g080590.2 | GRF1-interacting factor-like protein | HC |
          chr1:35837608-35836013 | 20130731
          Length = 149

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/24 (91%), Positives = 22/24 (91%)

Query: 63 MYLAAIADSQPQPPNMPGQYPSGG 86
          MYLAAIADSQPQPP MPGQYPS G
Sbjct: 1  MYLAAIADSQPQPPTMPGQYPSSG 24