Miyakogusa Predicted Gene

Lj1g3v4919790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4919790.1 tr|F4J7C4|F4J7C4_ARATH F-actin-capping protein
subunit alpha OS=Arabidopsis thaliana GN=At3g05520
PE,61.9,5e-17,F-actin_cap_A,WASH complex, F-actin capping protein,
alpha subunit; F-ACTIN-CAPPING PROTEIN SUBUNIT ,CUFF.33600.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g112700.1 | F-actin-capping protein subunit alpha | HC | c...   113   5e-26

>Medtr7g112700.1 | F-actin-capping protein subunit alpha | HC |
          chr7:46359429-46363617 | 20130731
          Length = 305

 Score =  113 bits (282), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 51/64 (79%), Positives = 58/64 (90%)

Query: 14 KQKVEIAKWFLLNSPPGEIQYVAKDVKSILNNDDLFNEAATEAFPVYNLTHLISLQLPNR 73
          KQKVEIAKWFLLNSPPGEIQYVAKDVKSILN+D  FNEAA+EAFP+YN +H I L +P+R
Sbjct: 13 KQKVEIAKWFLLNSPPGEIQYVAKDVKSILNDDGSFNEAASEAFPIYNKSHFIVLSMPDR 72

Query: 74 TGDV 77
          +GDV
Sbjct: 73 SGDV 76