Miyakogusa Predicted Gene

Lj1g3v4830430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4830430.1 tr|C0Z334|C0Z334_ARATH AT3G62190 protein
OS=Arabidopsis thaliana GN=At3g62190 PE=4 SV=1,73.77,2e-19,Chaperone
J-domain,Heat shock protein DnaJ, N-terminal; DnaJ,Heat shock protein
DnaJ, N-terminal; DN,CUFF.33387.1
         (133 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g110410.1 | chaperone DnaJ domain protein | HC | chr7:4526...   243   3e-65

>Medtr7g110410.1 | chaperone DnaJ domain protein | HC |
           chr7:45264986-45261963 | 20130731
          Length = 134

 Score =  243 bits (620), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 118/134 (88%), Positives = 125/134 (93%), Gaps = 1/134 (0%)

Query: 1   MDANDARILLGFPPNSHPTPSQVKSAYKKKVWESHPDLFPSHEKPLAESKFKLISEAYAC 60
           MDAN+ARILLGFPPNS+P+PSQVKSAYK+KVWESHPDLFPSHEKP AESKFKLISEAY C
Sbjct: 1   MDANEARILLGFPPNSNPSPSQVKSAYKQKVWESHPDLFPSHEKPHAESKFKLISEAYTC 60

Query: 61  LLPGGR-EASSSVEYSRVVRTGVPRAQGGRKNHAMIKVPFIFLILGTVTLGGFNASRAYR 119
           LLPGGR EAS+S EY RVVRTGVPRA GGRKNHAMIKVPF+ LILGTV LGGFNASRAY+
Sbjct: 61  LLPGGRGEASTSAEYWRVVRTGVPRANGGRKNHAMIKVPFLLLILGTVALGGFNASRAYK 120

Query: 120 RQKEAYPSHNPFLP 133
           RQKE YPSHNPFLP
Sbjct: 121 RQKEDYPSHNPFLP 134