Miyakogusa Predicted Gene

Lj1g3v4434240.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4434240.1 Non Characterized Hit- tr|I1LE58|I1LE58_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38721
PE,38.51,3e-18,seg,NULL,CUFF.32360.1
         (541 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g072160.1 | TIME FOR coffee-like protein, putative | HC | ...   258   1e-68
Medtr1g104710.1 | TIME FOR coffee-like protein, putative | HC | ...   100   3e-21

>Medtr1g072160.1 | TIME FOR coffee-like protein, putative | HC |
           chr1:32016258-32010788 | 20130731
          Length = 1199

 Score =  258 bits (659), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 209/569 (36%), Positives = 276/569 (48%), Gaps = 109/569 (19%)

Query: 25  SSDQNHRR-ISSAPLRHFDITGEMIGATVPRKARSASVKRPHESAV-----EEQSLQTEA 78
           +SDQNHRR +++A    F  T E+IG  VPRKARSASVKR  E  +     EEQ  +  +
Sbjct: 89  ASDQNHRRSVTAAKPPPFKRTDEIIGVVVPRKARSASVKRLREKWITGGGTEEQIFRRRS 148

Query: 79  ASPSSFRKKMKSIEPETQIPKAAA------SPXXXXXXXXXXXXXLLFGLRXXXXXXXXX 132
            SPS       S++  +Q+ K         +              LL GLR         
Sbjct: 149 NSPS----DSTSLDVSSQLKKRKVIGDVDKTSKSSSSDMEIEIAELLSGLRTFKNLESSS 204

Query: 133 XQKLGANDSHPQRSASPSMEAEEEKMEDYSVAENNSAAESVRIENEQPEKIEKASPGSAM 192
            +K+ A  +H     + SM+ E +K E Y     NS  E VRI+ +Q           A+
Sbjct: 205 -EKVEATINH-----NASMDTETKKWEVY-----NSTEELVRIQCDQ-----------AV 242

Query: 193 ISGCHEDENAASGKEVGSSEFPKEDNEKDNKNSGDTVNGRS-ELLSGSKSKMDVD---KL 248
            +GCH+     +  E GS E   E      +  G + +G+      GS+S M +D   K 
Sbjct: 243 DAGCHDGN--VTCHENGSLEVEIEKVNSGARFGGASADGKPLSTTRGSQSCMKLDAADKH 300

Query: 249 GSVSTREISAVPGANDQRADKFEIDLMAPPPMSLSAEMGNLSR---------CVKKEEMK 299
            SVSTRE+S  P    QR  KFEIDLMAPPPM LS +  +LSR              EMK
Sbjct: 301 DSVSTREMSTAPAT--QRLGKFEIDLMAPPPMMLSPKGNDLSRGNLTSASIKLAPDLEMK 358

Query: 300 EDVKIKFD----------------------------------------------LENQDR 313
            +  IK +                                              LE Q R
Sbjct: 359 RENSIKVEDKVERQATVEKNPEEIEEEANMATMNVLKHYLEKPNNDNDIKINNKLEEQGR 418

Query: 314 NEEQLLTLTSPKVEKSVQSSSMPLSKAVSEWPNCLS-------LHGYGPPMETVVKTEKT 366
           N+EQ + L++PKVEK+  SSS+PL  AVS  P+ LS         G  PP++TVVK   T
Sbjct: 419 NKEQPIALSNPKVEKTACSSSVPLPAAVSGLPSSLSPIGSITMTGGCTPPLQTVVKMNTT 478

Query: 367 TGSTTGQERVNFALSKPRTKRCATHHCIASNIFRHQQCAMMNPLLPLAIGFGSLGDTEPS 426
           TGS+T  +RVNFALS+P+ KRCATH+ IA  I   +Q   MNPLL  AIG GSL   + +
Sbjct: 479 TGSSTSAQRVNFALSEPQPKRCATHYQIARKILL-KQFTKMNPLLSAAIGSGSLCAPKTN 537

Query: 427 YVNRMRSAENVVVRKQSQKHSPGMDQNAAQGKGRAGASEFSLAATKSPGPANPMDSIQMK 486
            VN + SAE++++ KQSQKH P +DQN  Q K      + +L ATK+    NP+DSI   
Sbjct: 538 NVNCLLSAESMIINKQSQKHLPSLDQNGTQEKRLTVIGDHNLTATKNSNNPNPVDSIHQM 597

Query: 487 QLVLQQGHPGSFGNTLHGPTFLFPPGQHQ 515
            L+ Q    GS GN +HGP F+F P  +Q
Sbjct: 598 HLLQQGPFAGSTGNLVHGPAFVFSPAHYQ 626


>Medtr1g104710.1 | TIME FOR coffee-like protein, putative | HC |
           chr1:47174909-47167865 | 20130731
          Length = 1554

 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 132/314 (42%), Gaps = 74/314 (23%)

Query: 264 DQRADKFEIDLMAPPPMSLSA------EMGNLSRCVKKEEMKED---------------- 301
           +Q  +KF+IDLMAPPP   S+          +     K  MKED                
Sbjct: 466 NQLKEKFQIDLMAPPPSLRSSPERVVENNSVVEVEKVKHVMKEDQKSHKMDEVMVVEIEK 525

Query: 302 ---------------------VKIKFDLENQDR----------NEEQLLTLTSP------ 324
                                + ++ +LE  DR          N++Q   +         
Sbjct: 526 VKAKAEENEFQRAPIVQKERGIDLQLELEKTDRVDSNGNGNHLNKKQHQNVQRHHHQLQQ 585

Query: 325 --KVEKSVQSSSMPLSKAVSEWPNCLSLHGYGPPMETVVKTEKTTGSTTGQERVNFALSK 382
              +EK+VQS+S+P+   V  WP  L   GY  P++ VV  + TT  +      +   ++
Sbjct: 586 QTNLEKNVQSNSLPIPMNVPSWPGGLPSMGYMTPLQGVVSMDGTTMPSAAIPPPHLLFNQ 645

Query: 383 PRTKRCATHHCIASNIFRHQQCAMMNPLLPLAIGFGSLGDTEPSYVNRMRSAENVVVRKQ 442
           PR KRCATH  IA  I  +QQ A MNP  P A G  SL   +P       S  +VV    
Sbjct: 646 PRPKRCATHCHIAQKILYNQQIARMNPFWPAAAGSASLYGAKPG------SNLSVVPVPS 699

Query: 443 SQKHSP---GMDQNAAQGKGRAGAS-EFSLAATKSPGPANPMDSIQMKQLVLQQGHPGSF 498
           ++ HS    G   N+ Q KG + A     +   KS  P+N +D+   K ++LQQ  P   
Sbjct: 700 TELHSGNIHGRATNSTQDKGPSLAMFPGHIGKDKSSQPSN-VDNSSRKPILLQQTLPSGA 758

Query: 499 G--NTLHGPTFLFP 510
              N LHGPTF+FP
Sbjct: 759 APSNILHGPTFIFP 772