Miyakogusa Predicted Gene

Lj1g3v4289080.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4289080.2 tr|C7J9Q6|C7J9Q6_ORYSJ Os12g0236050 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os12g02360,53.01,2e-18,coiled-coil,NULL; seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.32219.2
         (544 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g092460.4 | nucleolar gar2-like protein | HC | chr7:366414...   601   e-172
Medtr7g092460.3 | nucleolar gar2-like protein | HC | chr7:366421...   601   e-172
Medtr7g092460.1 | nucleolar gar2-like protein | HC | chr7:366421...   601   e-172
Medtr7g092460.2 | nucleolar gar2-like protein | HC | chr7:366421...   601   e-172
Medtr1g075790.1 | hypothetical protein | HC | chr1:33586707-3358...   221   2e-57

>Medtr7g092460.4 | nucleolar gar2-like protein | HC |
           chr7:36641467-36636796 | 20130731
          Length = 710

 Score =  601 bits (1550), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 303/436 (69%), Positives = 326/436 (74%), Gaps = 4/436 (0%)

Query: 91  MKVNAMVANQASDTEKEQKEGNGEXXXXXXXXXXXXXQGDSFTNXXXXXXXXXXXXXXXX 150
           MKVN ++ N ++D EKEQKEGN +             QGDSFTN                
Sbjct: 1   MKVNEVIDNHSTDLEKEQKEGNEDVYDTDTTKDSLSSQGDSFTNEDVKVEKASKDPKNKV 60

Query: 151 XXXXXXXXRGLKERSDRKTNKLQSKVSDSNQKKPMNSTKGPSRVXXXXXXXXXXXPVKAP 210
                   RG +ERSDRKTNKLQSKVS SNQKK +NS KGPSRV           PVK P
Sbjct: 61  RANSLESNRGSRERSDRKTNKLQSKVSGSNQKKSINSNKGPSRVTNKNTSTNTK-PVKVP 119

Query: 211 VKASSESSEGVDENHVLEVKEIEILDGASNGAQSLGSEDERHETVNAEENGEHEDKAALE 270
            K SSESSEGVDE  V+EVKEIEILDG+SNGAQS+GSEDE HE VNAEENGE ED AA++
Sbjct: 120 AKVSSESSEGVDEKPVIEVKEIEILDGSSNGAQSVGSEDEIHEIVNAEENGEGEDGAAMK 179

Query: 271 LKIXXXXXXXXXXXXXXXXXXXXXVSLYSVVPEHGSSAHKVHTPARRLSRLYLHASKHWT 330
            KI                     VSLYS+VPEHGSSAHKVHTPARRLSRLY+HA KHWT
Sbjct: 180 SKIKEMESRIENLEEELREVAALEVSLYSIVPEHGSSAHKVHTPARRLSRLYIHACKHWT 239

Query: 331 QNRRATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISHAFGNSCQVSPLMRLA 390
             R+ATIAKN VSGLILVAKSCGNDVSRLTFWLSNTIVLREIIS AFGNS QVSP+MRLA
Sbjct: 240 PKRKATIAKNAVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISQAFGNSGQVSPIMRLA 299

Query: 391 ESNGA---GNGKSASLKWKGFPNGKAGSGFTQFVEDWQETGTFTSALERVESWIFSRLVE 447
            SNG+    +GKSASLKWKG PNGK+G+GF Q  EDWQETGTFT ALERVESWIFSRLVE
Sbjct: 300 GSNGSVKRNDGKSASLKWKGIPNGKSGNGFMQTGEDWQETGTFTLALERVESWIFSRLVE 359

Query: 448 SVWWQALTPYMQSPAGDFSSNKSFGRVLGPALGDHNQGNFSINLWRYAFEDAFQRLCPLR 507
           SVWWQALTPYMQS  GD  SNKS GR+LGPALGDHNQGNFSINLWR AF+DAFQRLCPLR
Sbjct: 360 SVWWQALTPYMQSSVGDSCSNKSAGRLLGPALGDHNQGNFSINLWRNAFQDAFQRLCPLR 419

Query: 508 AGGHECGCLPVLARMV 523
           AGGHECGCLPV+ARMV
Sbjct: 420 AGGHECGCLPVMARMV 435


>Medtr7g092460.3 | nucleolar gar2-like protein | HC |
           chr7:36642157-36636796 | 20130731
          Length = 710

 Score =  601 bits (1550), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 303/436 (69%), Positives = 326/436 (74%), Gaps = 4/436 (0%)

Query: 91  MKVNAMVANQASDTEKEQKEGNGEXXXXXXXXXXXXXQGDSFTNXXXXXXXXXXXXXXXX 150
           MKVN ++ N ++D EKEQKEGN +             QGDSFTN                
Sbjct: 1   MKVNEVIDNHSTDLEKEQKEGNEDVYDTDTTKDSLSSQGDSFTNEDVKVEKASKDPKNKV 60

Query: 151 XXXXXXXXRGLKERSDRKTNKLQSKVSDSNQKKPMNSTKGPSRVXXXXXXXXXXXPVKAP 210
                   RG +ERSDRKTNKLQSKVS SNQKK +NS KGPSRV           PVK P
Sbjct: 61  RANSLESNRGSRERSDRKTNKLQSKVSGSNQKKSINSNKGPSRVTNKNTSTNTK-PVKVP 119

Query: 211 VKASSESSEGVDENHVLEVKEIEILDGASNGAQSLGSEDERHETVNAEENGEHEDKAALE 270
            K SSESSEGVDE  V+EVKEIEILDG+SNGAQS+GSEDE HE VNAEENGE ED AA++
Sbjct: 120 AKVSSESSEGVDEKPVIEVKEIEILDGSSNGAQSVGSEDEIHEIVNAEENGEGEDGAAMK 179

Query: 271 LKIXXXXXXXXXXXXXXXXXXXXXVSLYSVVPEHGSSAHKVHTPARRLSRLYLHASKHWT 330
            KI                     VSLYS+VPEHGSSAHKVHTPARRLSRLY+HA KHWT
Sbjct: 180 SKIKEMESRIENLEEELREVAALEVSLYSIVPEHGSSAHKVHTPARRLSRLYIHACKHWT 239

Query: 331 QNRRATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISHAFGNSCQVSPLMRLA 390
             R+ATIAKN VSGLILVAKSCGNDVSRLTFWLSNTIVLREIIS AFGNS QVSP+MRLA
Sbjct: 240 PKRKATIAKNAVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISQAFGNSGQVSPIMRLA 299

Query: 391 ESNGA---GNGKSASLKWKGFPNGKAGSGFTQFVEDWQETGTFTSALERVESWIFSRLVE 447
            SNG+    +GKSASLKWKG PNGK+G+GF Q  EDWQETGTFT ALERVESWIFSRLVE
Sbjct: 300 GSNGSVKRNDGKSASLKWKGIPNGKSGNGFMQTGEDWQETGTFTLALERVESWIFSRLVE 359

Query: 448 SVWWQALTPYMQSPAGDFSSNKSFGRVLGPALGDHNQGNFSINLWRYAFEDAFQRLCPLR 507
           SVWWQALTPYMQS  GD  SNKS GR+LGPALGDHNQGNFSINLWR AF+DAFQRLCPLR
Sbjct: 360 SVWWQALTPYMQSSVGDSCSNKSAGRLLGPALGDHNQGNFSINLWRNAFQDAFQRLCPLR 419

Query: 508 AGGHECGCLPVLARMV 523
           AGGHECGCLPV+ARMV
Sbjct: 420 AGGHECGCLPVMARMV 435


>Medtr7g092460.1 | nucleolar gar2-like protein | HC |
           chr7:36642157-36636796 | 20130731
          Length = 710

 Score =  601 bits (1550), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 303/436 (69%), Positives = 326/436 (74%), Gaps = 4/436 (0%)

Query: 91  MKVNAMVANQASDTEKEQKEGNGEXXXXXXXXXXXXXQGDSFTNXXXXXXXXXXXXXXXX 150
           MKVN ++ N ++D EKEQKEGN +             QGDSFTN                
Sbjct: 1   MKVNEVIDNHSTDLEKEQKEGNEDVYDTDTTKDSLSSQGDSFTNEDVKVEKASKDPKNKV 60

Query: 151 XXXXXXXXRGLKERSDRKTNKLQSKVSDSNQKKPMNSTKGPSRVXXXXXXXXXXXPVKAP 210
                   RG +ERSDRKTNKLQSKVS SNQKK +NS KGPSRV           PVK P
Sbjct: 61  RANSLESNRGSRERSDRKTNKLQSKVSGSNQKKSINSNKGPSRVTNKNTSTNTK-PVKVP 119

Query: 211 VKASSESSEGVDENHVLEVKEIEILDGASNGAQSLGSEDERHETVNAEENGEHEDKAALE 270
            K SSESSEGVDE  V+EVKEIEILDG+SNGAQS+GSEDE HE VNAEENGE ED AA++
Sbjct: 120 AKVSSESSEGVDEKPVIEVKEIEILDGSSNGAQSVGSEDEIHEIVNAEENGEGEDGAAMK 179

Query: 271 LKIXXXXXXXXXXXXXXXXXXXXXVSLYSVVPEHGSSAHKVHTPARRLSRLYLHASKHWT 330
            KI                     VSLYS+VPEHGSSAHKVHTPARRLSRLY+HA KHWT
Sbjct: 180 SKIKEMESRIENLEEELREVAALEVSLYSIVPEHGSSAHKVHTPARRLSRLYIHACKHWT 239

Query: 331 QNRRATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISHAFGNSCQVSPLMRLA 390
             R+ATIAKN VSGLILVAKSCGNDVSRLTFWLSNTIVLREIIS AFGNS QVSP+MRLA
Sbjct: 240 PKRKATIAKNAVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISQAFGNSGQVSPIMRLA 299

Query: 391 ESNGA---GNGKSASLKWKGFPNGKAGSGFTQFVEDWQETGTFTSALERVESWIFSRLVE 447
            SNG+    +GKSASLKWKG PNGK+G+GF Q  EDWQETGTFT ALERVESWIFSRLVE
Sbjct: 300 GSNGSVKRNDGKSASLKWKGIPNGKSGNGFMQTGEDWQETGTFTLALERVESWIFSRLVE 359

Query: 448 SVWWQALTPYMQSPAGDFSSNKSFGRVLGPALGDHNQGNFSINLWRYAFEDAFQRLCPLR 507
           SVWWQALTPYMQS  GD  SNKS GR+LGPALGDHNQGNFSINLWR AF+DAFQRLCPLR
Sbjct: 360 SVWWQALTPYMQSSVGDSCSNKSAGRLLGPALGDHNQGNFSINLWRNAFQDAFQRLCPLR 419

Query: 508 AGGHECGCLPVLARMV 523
           AGGHECGCLPV+ARMV
Sbjct: 420 AGGHECGCLPVMARMV 435


>Medtr7g092460.2 | nucleolar gar2-like protein | HC |
           chr7:36642157-36636796 | 20130731
          Length = 710

 Score =  601 bits (1550), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 303/436 (69%), Positives = 326/436 (74%), Gaps = 4/436 (0%)

Query: 91  MKVNAMVANQASDTEKEQKEGNGEXXXXXXXXXXXXXQGDSFTNXXXXXXXXXXXXXXXX 150
           MKVN ++ N ++D EKEQKEGN +             QGDSFTN                
Sbjct: 1   MKVNEVIDNHSTDLEKEQKEGNEDVYDTDTTKDSLSSQGDSFTNEDVKVEKASKDPKNKV 60

Query: 151 XXXXXXXXRGLKERSDRKTNKLQSKVSDSNQKKPMNSTKGPSRVXXXXXXXXXXXPVKAP 210
                   RG +ERSDRKTNKLQSKVS SNQKK +NS KGPSRV           PVK P
Sbjct: 61  RANSLESNRGSRERSDRKTNKLQSKVSGSNQKKSINSNKGPSRVTNKNTSTNTK-PVKVP 119

Query: 211 VKASSESSEGVDENHVLEVKEIEILDGASNGAQSLGSEDERHETVNAEENGEHEDKAALE 270
            K SSESSEGVDE  V+EVKEIEILDG+SNGAQS+GSEDE HE VNAEENGE ED AA++
Sbjct: 120 AKVSSESSEGVDEKPVIEVKEIEILDGSSNGAQSVGSEDEIHEIVNAEENGEGEDGAAMK 179

Query: 271 LKIXXXXXXXXXXXXXXXXXXXXXVSLYSVVPEHGSSAHKVHTPARRLSRLYLHASKHWT 330
            KI                     VSLYS+VPEHGSSAHKVHTPARRLSRLY+HA KHWT
Sbjct: 180 SKIKEMESRIENLEEELREVAALEVSLYSIVPEHGSSAHKVHTPARRLSRLYIHACKHWT 239

Query: 331 QNRRATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISHAFGNSCQVSPLMRLA 390
             R+ATIAKN VSGLILVAKSCGNDVSRLTFWLSNTIVLREIIS AFGNS QVSP+MRLA
Sbjct: 240 PKRKATIAKNAVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISQAFGNSGQVSPIMRLA 299

Query: 391 ESNGA---GNGKSASLKWKGFPNGKAGSGFTQFVEDWQETGTFTSALERVESWIFSRLVE 447
            SNG+    +GKSASLKWKG PNGK+G+GF Q  EDWQETGTFT ALERVESWIFSRLVE
Sbjct: 300 GSNGSVKRNDGKSASLKWKGIPNGKSGNGFMQTGEDWQETGTFTLALERVESWIFSRLVE 359

Query: 448 SVWWQALTPYMQSPAGDFSSNKSFGRVLGPALGDHNQGNFSINLWRYAFEDAFQRLCPLR 507
           SVWWQALTPYMQS  GD  SNKS GR+LGPALGDHNQGNFSINLWR AF+DAFQRLCPLR
Sbjct: 360 SVWWQALTPYMQSSVGDSCSNKSAGRLLGPALGDHNQGNFSINLWRNAFQDAFQRLCPLR 419

Query: 508 AGGHECGCLPVLARMV 523
           AGGHECGCLPV+ARMV
Sbjct: 420 AGGHECGCLPVMARMV 435


>Medtr1g075790.1 | hypothetical protein | HC |
           chr1:33586707-33580151 | 20130731
          Length = 994

 Score =  221 bits (562), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 114/234 (48%), Positives = 154/234 (65%), Gaps = 24/234 (10%)

Query: 296 SLYSVVPEHGSSAHKVHTPARRLSRLYLHASKHWTQNRRATIAKNTVSGLILVAKSCGND 355
           S+YSV+ EHGSS +KVH PARRLSR Y HA K  + ++ A+ A++ VSG + V+K+CGND
Sbjct: 525 SMYSVIAEHGSS-NKVHAPARRLSRFYFHARKAGSPDKIASAAQSIVSGFVFVSKACGND 583

Query: 356 VSRLTFWLSNTIVLREIISHAFGNSCQVSPLMRLAESNGAGNGKSASLKWKGFPNG---- 411
           V RLTFW SN I+LR I+S    +                  G +A +  + + NG    
Sbjct: 584 VPRLTFWFSNIILLRAIVSKGVEHK---------------DLGDAACINGERYVNGLTLH 628

Query: 412 -KAGSGFTQFVEDWQETGTFTSALERVESWIFSRLVESVWWQALTPYMQSPAGDFSSN-K 469
            +      ++  +W +  TF  ALE+VE+WIFSR+VESVWWQ LTPYMQS A   SS+ K
Sbjct: 629 EQEKENTEEYFHNWLDPETFLVALEKVEAWIFSRIVESVWWQTLTPYMQSAAAKSSSSRK 688

Query: 470 SFGRVLGPALGDHNQGNFSINLWRYAFEDAFQRLCPLRAGGHECGCLPVLARMV 523
           + G+     +GD +QGNFSI+LW+ AF+D+ +RLCPLRAGG +CGCLPV++RMV
Sbjct: 689 TNGKRY--IIGDQDQGNFSIDLWKRAFKDSCERLCPLRAGGLDCGCLPVISRMV 740