Miyakogusa Predicted Gene
- Lj1g3v4204450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4204450.1 Non Characterized Hit- tr|I1J6T4|I1J6T4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,37.14,8e-18,DUF4283,Domain of unknown function DUF4283;
zf-CCHC_4,Zinc knuckle CX2CX4HX4C; seg,NULL; ZF_CCHC,Zin,CUFF.32057.1
(201 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g037050.1 | DUF4283 domain protein | LC | chr6:13030267-13... 140 6e-34
Medtr1g089610.1 | DUF4283 domain protein | HC | chr1:40131229-40... 99 3e-21
Medtr4g122570.1 | DUF4283 domain protein | HC | chr4:50550588-50... 92 3e-19
Medtr1g054775.1 | endonuclease/exonuclease/phosphatase family pr... 85 4e-17
Medtr5g037520.1 | DUF4283 domain protein | LC | chr5:16419179-16... 59 2e-09
Medtr6g045237.1 | DUF4283 domain protein | LC | chr6:16169322-16... 59 2e-09
Medtr2g438650.1 | DUF4283 domain protein | LC | chr2:15632906-15... 58 7e-09
Medtr0236s0020.1 | hypothetical protein | LC | scaffold0236:1344... 52 5e-07
Medtr6g061130.1 | DUF4283 domain protein | LC | chr6:21165177-21... 51 8e-07
Medtr5g018950.1 | hypothetical protein | LC | chr5:7117401-71169... 51 8e-07
Medtr4g096760.1 | DUF4283 domain protein | LC | chr4:38501881-38... 50 1e-06
Medtr0012s0140.1 | DUF4283 domain protein | LC | scaffold0012:10... 50 2e-06
Medtr8g104170.1 | DUF4283 domain protein | LC | chr8:43859492-43... 50 2e-06
Medtr1g070150.1 | DUF4283 domain protein | LC | chr1:30819849-30... 50 2e-06
Medtr1g093780.1 | DUF4283 domain protein | LC | chr1:42082356-42... 49 3e-06
Medtr1g040935.1 | DUF4283 domain protein | LC | chr1:15200980-15... 49 3e-06
Medtr1g041005.1 | DUF4283 domain protein | LC | chr1:15220304-15... 49 4e-06
Medtr4g045863.1 | DUF4283 domain protein | LC | chr4:15804884-15... 49 4e-06
Medtr6g471850.1 | DUF4283 domain protein | LC | chr6:25821627-25... 49 4e-06
Medtr7g445700.1 | DUF4283 domain protein | LC | chr7:15486160-15... 48 5e-06
>Medtr6g037050.1 | DUF4283 domain protein | LC |
chr6:13030267-13029049 | 20130731
Length = 386
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 80/97 (82%)
Query: 7 MVFDHYLAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIKLDR 66
M+FDH LAV WSPEF SP A+V++T+ W+R PGLN+V+Y+ES+LL+ A AIG+PIK+
Sbjct: 1 MIFDHCLAVTHWSPEFASPKAKVERTVVWVRFPGLNLVYYDESFLLAMASAIGRPIKVYT 60
Query: 67 STLKAERGRFARICVELDLDKPVVGKICLEDYWYKVE 103
+TLK ERG+FAR+CVE+DL PVVGKI + +WYK++
Sbjct: 61 NTLKVERGKFARVCVEVDLTVPVVGKIWINGHWYKIQ 97
>Medtr1g089610.1 | DUF4283 domain protein | HC |
chr1:40131229-40132268 | 20130731
Length = 181
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 55/68 (80%)
Query: 13 LAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIKLDRSTLKAE 72
+ WSPEF SP A+VK+T+ WIR PGLN+V+Y+ES+LL+ A AIG+PIK+D +TL+
Sbjct: 112 FEIIDWSPEFTSPEAKVKRTVVWIRFPGLNLVYYDESFLLAMASAIGRPIKVDNNTLRMG 171
Query: 73 RGRFARIC 80
RGRFAR+C
Sbjct: 172 RGRFARVC 179
>Medtr4g122570.1 | DUF4283 domain protein | HC |
chr4:50550588-50548256 | 20130731
Length = 530
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 53/68 (77%)
Query: 1 MGGGPWMVFDHYLAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGK 60
+G G WM+FDHYL VA WS EF+S A+++KT+ W+R PG+++++Y+ES LL A AIG
Sbjct: 13 IGEGLWMIFDHYLTVAKWSLEFVSSTAKIEKTMVWVRFPGMSLIYYDESVLLVLASAIGT 72
Query: 61 PIKLDRST 68
PIK+D+ T
Sbjct: 73 PIKVDQRT 80
>Medtr1g054775.1 | endonuclease/exonuclease/phosphatase family
protein | LC | chr1:23942081-23949866 | 20130731
Length = 1456
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 1 MGGGPWMVFDHYLAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGK 60
+ GGPWM+FDHYLA WSP F + A + KT+AWIRIP LN+V+Y+ES L + A +G
Sbjct: 378 INGGPWMIFDHYLAFCQWSPTFNAATATIDKTMAWIRIPSLNLVYYDESLLWAVASMVGT 437
Query: 61 PIKLD 65
+KL+
Sbjct: 438 LVKLE 442
>Medtr5g037520.1 | DUF4283 domain protein | LC |
chr5:16419179-16420719 | 20130731
Length = 441
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%)
Query: 4 GPWMVFDHYLAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIK 63
G W + L +W+P+F + W+RI GL ++ L ARA+G P+
Sbjct: 147 GYWNLSLGLLRTFSWTPDFNPLTMQETTAQTWVRIHGLAREYWQPITLFEIARALGNPLT 206
Query: 64 LDRSTLKAERGRFARICVELDLDKPVVGKICLEDYWYKVEYEG 106
LD +T K G FAR+ +E+DL+ + +I +E + +G
Sbjct: 207 LDEATKKRTFGHFARVLIEVDLNSHLHDRILVERNGFDFYVDG 249
>Medtr6g045237.1 | DUF4283 domain protein | LC |
chr6:16169322-16170764 | 20130731
Length = 480
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 13 LAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIKLDRSTLKAE 72
L + WS +F + R WIR+ L ++ + L AIG P+ +D +T
Sbjct: 149 LRLFEWSKDFTARTQRQTHAQVWIRLLELPQEYWMDRTLKEIGSAIGTPVLIDSATQNRV 208
Query: 73 RGRFARICVELDLDKPVVGKICLE----DYWYKVEYEGLHVICTKCGCYGHRSREC 124
G + R+ V++DL K + ++ +E + ++ YE L CT G GH C
Sbjct: 209 FGHYVRVLVDMDLSKHIFNEVMIERTGFSFSIEITYECLPAFCTHYGNIGHHISSC 264
>Medtr2g438650.1 | DUF4283 domain protein | LC |
chr2:15632906-15635561 | 20130731
Length = 459
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 4 GPWMVFDHYLAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIK 63
G W + L ++ WSPEFIS + + + W+R L + ++ L A AIG PI
Sbjct: 164 GAWNLKPRLLQLSRWSPEFISSSQKQTHSQVWVRFYYLPLDYWQPLTLFEIAGAIGTPIT 223
Query: 64 LDRSTLKAERGRFARICVELDL 85
+D ST G +AR+ V++D+
Sbjct: 224 IDESTKNHAFGHYARVLVDVDM 245
>Medtr0236s0020.1 | hypothetical protein | LC |
scaffold0236:13446-11878 | 20130731
Length = 62
Score = 51.6 bits (122), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 1 MGGGPWMVFDHYLAVATWSPEFISPAARVKKTLAW 35
M GG W+ F HYLAV+ WSPEF SP A+ ++ + W
Sbjct: 1 MTGGHWLTFYHYLAVSKWSPEFASPNAKFERIVVW 35
>Medtr6g061130.1 | DUF4283 domain protein | LC |
chr6:21165177-21163797 | 20130731
Length = 377
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 35 WIRIPGLNVVFYNESYLLSAARAIGKPIKLDRSTLKAERGRFARICVELDLDKPVVGKIC 94
WIR+ L ++ + L + +G P+ +D T+K G +ARI V++D + + +I
Sbjct: 92 WIRLLELPQEYWMDRTLREISSVVGTPLLIDSVTIKRIYGHYARILVDMDFSRQIFHEIT 151
Query: 95 LED--YWYKVE--YEGLHVICTKCGCYGHRSREC 124
+E Y ++VE YE L T C GH C
Sbjct: 152 VEREGYAFQVEVAYEWLLYYRTHCHTIGHDVSSC 185
>Medtr5g018950.1 | hypothetical protein | LC |
chr5:7117401-7116987 | 20130731
Length = 70
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 31 KTLAWIRIPGLNVVFYNESYLLSAARAIGKPIKLDRSTLKAERGRFA 77
K L WIR LN+V+Y++S+LL IG IK++ +TLK E GRFA
Sbjct: 24 KDLVWIRFHVLNLVYYDDSFLLVMPSTIGLHIKVNNNTLKMECGRFA 70
>Medtr4g096760.1 | DUF4283 domain protein | LC |
chr4:38501881-38500295 | 20130731
Length = 508
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 13 LAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIKLDRSTLKAE 72
L + W+ +F R WIR+ L ++ E L A A+G P+ LD +TLK
Sbjct: 156 LRLFEWTVDFDMYNQRNTHAQVWIRLMALPQEYWMEQTLREIASAVGTPLVLDNATLKRL 215
Query: 73 RGRFARICVELDLDKPVVGKICLE 96
G +ARI V++D K + +I +E
Sbjct: 216 FGHYARILVDIDFSKRIFHEIIVE 239
>Medtr0012s0140.1 | DUF4283 domain protein | LC |
scaffold0012:100281-103414 | 20130731
Length = 582
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 13 LAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIKLDRSTLKAE 72
L ++ W+ +F A WIR+ L ++ E L A A+G PI +D T
Sbjct: 156 LRLSQWTKDFNHNAQTQTHASLWIRLVALPHDYWRERTLKEIASAVGTPISIDGPTRNRA 215
Query: 73 RGRFARICVELDLDKPVVGKICLEDYWYKVEYEGLHVICTKCG 115
G +ARI V++DL K V +I +E + E + V CG
Sbjct: 216 FGHYARILVDIDLSKRVYDEILVEREGFTFNVEVVKV--PDCG 256
>Medtr8g104170.1 | DUF4283 domain protein | LC |
chr8:43859492-43857998 | 20130731
Length = 397
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 13 LAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIKLDRSTLK-- 70
L + TW+ +F W+RI L+ ++ L + A +G PI +D + K
Sbjct: 76 LKLFTWTNDFSPSVQNSSSAQVWVRIHALSQEYWRPKILFAIANGVGTPICIDAALSKPM 135
Query: 71 AERG--RFARICVELDLDKPVVGKICLED----YWYKVEYEGLHVICTKCGCYGH 119
ER +FAR+ V++DL + + K+ +E ++ EYE L T GH
Sbjct: 136 VERTFEQFARVLVDMDLSQNLRYKVLVERKNYAFFVNFEYENLLDFGTHYNKIGH 190
>Medtr1g070150.1 | DUF4283 domain protein | LC |
chr1:30819849-30820390 | 20130731
Length = 160
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 3 GGPWMVFDHYLAVATWSPEFISPAARVKKTL 33
GGPW++FDH L V+ WSPEF SP A+++ T+
Sbjct: 125 GGPWLIFDHCLDVSHWSPEFASPNAKIETTI 155
>Medtr1g093780.1 | DUF4283 domain protein | LC |
chr1:42082356-42080689 | 20130731
Length = 515
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 43/85 (50%)
Query: 12 YLAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIKLDRSTLKA 71
++ + W+ +FIS A W+R+ L ++ + + A +G P+ +D +T+
Sbjct: 106 FMHFSCWTKDFISKAQAQTHAQVWVRLMNLPHEYWGKQTIFEIASGLGSPLTIDDATVNR 165
Query: 72 ERGRFARICVELDLDKPVVGKICLE 96
G FAR+ V++DL + + +E
Sbjct: 166 RFGLFARVLVDVDLANKMFDSVIVE 190
>Medtr1g040935.1 | DUF4283 domain protein | LC |
chr1:15200980-15199324 | 20130731
Length = 355
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 13 LAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIKLDRSTLKAE 72
L + WS +F R T WIR+ L ++ E L A A+G P+ +D +T K
Sbjct: 34 LRLFEWSKDFNMLTQRNPYTQVWIRLLELPHEYWMEQTLREIASAVGTPLVIDNATSKRL 93
Query: 73 RGRFARICVELDLDKPVVGKICLEDYWYK----VEYEGLHVICTKC 114
+ARI V++D + + +I +E Y V Y+ + C+ C
Sbjct: 94 FRHYARILVDMDFSRKIFHEIVVEREGYAFPIFVAYKWMPDFCSHC 139
>Medtr1g041005.1 | DUF4283 domain protein | LC |
chr1:15220304-15218885 | 20130731
Length = 316
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 13 LAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIKLDRSTLKAE 72
L + WS +F R T WIR+ L ++ E L A A+G P+ +D S+ K
Sbjct: 91 LRLFEWSKDFNMLTQRNPYTQVWIRLLELPHEYWMEQTLREIASAVGTPLVIDNSSSKRL 150
Query: 73 RGRFARICVELDLDKPVVGKICLE 96
G +ARI V++D + + +I +E
Sbjct: 151 FGHYARILVDMDFSRKIFHEIVVE 174
>Medtr4g045863.1 | DUF4283 domain protein | LC |
chr4:15804884-15803602 | 20130731
Length = 404
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 6 WMVFDHYLAVATWSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIKLD 65
W + +L + WS F + + W+RI GL+ ++ ++ L S +G PI D
Sbjct: 61 WNLSPGFLKLFAWSTHFNPKSQQNTNAQVWVRIYGLSQEYWRKNILFSIVSGVGSPICTD 120
Query: 66 RSTLKA--ER--GRFARICVELDLDKPVVGKICLED----YWYKVEYEGLHV 109
T K ER G++AR+ V++DL + + + +E ++ +E G HV
Sbjct: 121 TVTAKPMIERTFGQYARVLVDIDLTQTLRYSLLVERKGFAFYVDLEMIGHHV 172
>Medtr6g471850.1 | DUF4283 domain protein | LC |
chr6:25821627-25823284 | 20130731
Length = 496
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 18 WSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIKLDRSTLKAERGRFA 77
W +F + R WIR+ L ++ + L A AIG P+ +D +T G +A
Sbjct: 121 WFKDFTARTQRQTHAQVWIRLLELPQEYWMDRMLKEIASAIGTPLLIDSATQNRVFGHYA 180
Query: 78 RICVELDLDKPVVGKICLE----DYWYKVEYEGLHVICTKCGC 116
R+ V++DL K + ++ +E + ++ YE L G
Sbjct: 181 RVLVDMDLSKHIFNEVMIERTGFSFSIEITYERLPAFVLTAGT 223
>Medtr7g445700.1 | DUF4283 domain protein | LC |
chr7:15486160-15484152 | 20130731
Length = 610
Score = 48.1 bits (113), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 18 WSPEFISPAARVKKTLAWIRIPGLNVVFYNESYLLSAARAIGKPIKLDRSTLKAERGRFA 77
WS +F A W+R L ++ + L A +G P+ +D +T + G FA
Sbjct: 152 WSKDFAPQAQSQTHAQIWVRFLNLPQEYWEKQTLFEIASGLGTPLSIDETTQRRRFGIFA 211
Query: 78 RICVELDLDKPVVGKICLEDYWY----KVEYEGLHVICTKCGCYGHRSREC 124
R+ +++DL + + + +E + ++YE + C GH + C
Sbjct: 212 RVLIDVDLFENLFESVVVEREDHALSISIQYEKHPLFCAHYKMLGHSIQSC 262