Miyakogusa Predicted Gene

Lj1g3v3462910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3462910.1 CUFF.30774.1
         (164 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g059330.1 | B3 domain transcription factor | HC | chr7:214...   117   4e-27

>Medtr7g059330.1 | B3 domain transcription factor | HC |
           chr7:21484825-21481293 | 20130731
          Length = 770

 Score =  117 bits (293), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/177 (47%), Positives = 94/177 (53%), Gaps = 23/177 (12%)

Query: 2   WLNTT--DQD-DLLGVN-DATASMFYSDFPSLPDFSCMXXXXXXXXX-TPALPLNNIXXX 56
           WLN T  DQD DLLG+N +  ASMFY+DFP LPDF CM          TP   +      
Sbjct: 28  WLNNTTNDQDGDLLGMNMNDDASMFYADFPPLPDFPCMSSSSSSSSSSTPLKTIACTSTT 87

Query: 57  XXXXXXXXXXXXXXXXXWAVLKSDADVEEKNGYMXXXXXXXXXDPIDHAITRTPVTGALS 116
                            WAVLKSD +V+ + GY           P+D+     P T  LS
Sbjct: 88  TTTTSSSSSASSSSAASWAVLKSDVEVDHQ-GYQKHGH------PLDYHHGHPPTT--LS 138

Query: 117 STASMEISQQQHDPVIV---------GDCMDGVMEMDTFGYMELLEANEFFDPASIF 164
           STASMEISQQQ   + V         GDCMD V  MDTFGYMELLEANEFFDPASIF
Sbjct: 139 STASMEISQQQQQDLGVSNNDVVVGGGDCMDDVNIMDTFGYMELLEANEFFDPASIF 195