Miyakogusa Predicted Gene

Lj1g3v3343860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3343860.1 tr|G7J729|G7J729_MEDTR Telomeric repeat-binding
factor OS=Medicago truncatula GN=MTR_3g116690 PE=4
S,28.14,1e-18,Myb_DNA-binding,SANT/Myb domain; SANT  SWI3, ADA2, N-CoR
and TFIIIB'' DNA-bin,SANT/Myb domain; HTH_M,CUFF.30497.1
         (340 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g117790.2 | myb-like DNA-binding domain protein | LC | chr...    90   4e-18
Medtr3g117790.1 | myb-like DNA-binding domain protein | LC | chr...    84   2e-16
Medtr3g116690.1 | myb-like DNA-binding domain protein | LC | chr...    81   1e-15
Medtr3g467090.3 | myb-like DNA-binding domain protein | HC | chr...    78   1e-14
Medtr3g467090.2 | myb-like DNA-binding domain protein | HC | chr...    78   1e-14
Medtr3g467090.1 | myb-like DNA-binding domain protein | HC | chr...    78   1e-14

>Medtr3g117790.2 | myb-like DNA-binding domain protein | LC |
           chr3:55154859-55157273 | 20130731
          Length = 428

 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 155/354 (43%), Gaps = 95/354 (26%)

Query: 76  SEGSPVSASFTAAYCAVAVECTLKYIKLEGSIPRYFDSVKTIWWKRVMNMKP-----SPG 130
           S  +P+S +  +AY  +AVECT+KY++  G+      +V  IW +R   ++      +P 
Sbjct: 81  SNPNPISHAMKSAYFYIAVECTVKYLEAGGTSNYLQAAVDRIWNRRFQKLEEGSYLLTPK 140

Query: 131 GEKRSLLFSD-----------------------ELDRWRIDIEASLNDPCVRDRLAA--- 164
                 L +D                       E+ R+ +D   +L  P     +AA   
Sbjct: 141 WRLWKTLINDSLVDSQTMLRLASLSNTRKKAIKEVQRFLVDARNNLVGPSFLHSVAAPAQ 200

Query: 165 --TENTRSVAIN----RLK-------VFFAEL-----WEGVDPSFLELAVENAATDAAEE 206
             + N   + ++    RLK       V   E+     +  +DP    L V  A  +    
Sbjct: 201 NQSHNESPMEVDKDNGRLKGKASTTIVVVEEMATSTSFSKIDP----LPVNEAPKNKCNS 256

Query: 207 QQRETQEGNLLLDDICITNVVEE--------MDPSTTCQS---DVP-PTT---------- 244
            + ET   + + D IC+T++V           +P    QS   +VP P T          
Sbjct: 257 VEFETFANDPVPDSICMTDIVRSDVAIEETNQEPQMENQSKDANVPNPQTCLNINNDEAN 316

Query: 245 ---------------TNAHAHEGETS---NRPQLPSPKRKRVSPLKKYEPRNVIKRRTTR 286
                          ++A  HE  TS   +R +L SP+ K++SPLK+YEP+ + KRR  +
Sbjct: 317 LTKATSHHPSLMNPNSSARTHEAGTSRGTSRIRLRSPETKKLSPLKEYEPKKITKRRKKK 376

Query: 287 KWSQLEEETLEKAVNKFGIGNWKLMLNAHKDVFERRTDGDLKDKWRNMRRCRSK 340
           KWSQ EE+ L   +   G GNWK +L ++   F+ RT+ DLKDKWRN++R  S+
Sbjct: 377 KWSQWEEDNLRTGIKLIGEGNWKSILRSY--AFDERTEVDLKDKWRNLKRYESQ 428


>Medtr3g117790.1 | myb-like DNA-binding domain protein | LC |
           chr3:55154859-55157302 | 20130731
          Length = 437

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 155/363 (42%), Gaps = 104/363 (28%)

Query: 76  SEGSPVSASFTAAYCAVAVECTLKYIKLEGSIPRYFDSVKTIWWKRVMNMKP-----SPG 130
           S  +P+S +  +AY  +AVECT+KY++  G+      +V  IW +R   ++      +P 
Sbjct: 81  SNPNPISHAMKSAYFYIAVECTVKYLEAGGTSNYLQAAVDRIWNRRFQKLEEGSYLLTPK 140

Query: 131 GEKRSLLFSD-----------------------ELDRWRIDIEASLNDPCVRDRLAA--- 164
                 L +D                       E+ R+ +D   +L  P     +AA   
Sbjct: 141 WRLWKTLINDSLVDSQTMLRLASLSNTRKKAIKEVQRFLVDARNNLVGPSFLHSVAAPAQ 200

Query: 165 --TENTRSVAIN----RLK-------VFFAEL-----WEGVDPSFLELAVENAATDAAEE 206
             + N   + ++    RLK       V   E+     +  +DP    L V  A  +    
Sbjct: 201 NQSHNESPMEVDKDNGRLKGKASTTIVVVEEMATSTSFSKIDP----LPVNEAPKNKCNS 256

Query: 207 QQRETQEGNLLLDDICITNVVEE--------MDPSTTCQS---DVP-PTT---------- 244
            + ET   + + D IC+T++V           +P    QS   +VP P T          
Sbjct: 257 VEFETFANDPVPDSICMTDIVRSDVAIEETNQEPQMENQSKDANVPNPQTCLNINNDEAN 316

Query: 245 ---------------TNAHAHEGETS------------NRPQLPSPKRKRVSPLKKYEPR 277
                          ++A  HE + S            +R +L SP+ K++SPLK+YEP+
Sbjct: 317 LTKATSHHPSLMNPNSSARTHEWDDSIDGLQAGTSRGTSRIRLRSPETKKLSPLKEYEPK 376

Query: 278 NVIKRRTTRKWSQLEEETLEKAVNKFGIGNWKLMLNAHKDVFERRTDGDLKDKWRNMRRC 337
            + KRR  +KWSQ EE+ L   +   G GNWK +L ++   F+ RT+ DLKDKWRN++R 
Sbjct: 377 KITKRRKKKKWSQWEEDNLRTGIKLIGEGNWKSILRSY--AFDERTEVDLKDKWRNLKRY 434

Query: 338 RSK 340
            S+
Sbjct: 435 ESQ 437


>Medtr3g116690.1 | myb-like DNA-binding domain protein | LC |
           chr3:54571175-54573963 | 20130731
          Length = 437

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 152/355 (42%), Gaps = 96/355 (27%)

Query: 76  SEGSPVSASFTAAYCAVAVECTLKYIKLEGSIPRYFDSVKTIWWKRVMNMKP-----SPG 130
           S  +P+S +  +AY  +AVECT+KY++  G+      +V  IW +R   ++      +P 
Sbjct: 81  SNPNPISHAMKSAYFYIAVECTVKYLEAGGTSNYLQAAVDRIWNRRFQKLEEGSYLLTPK 140

Query: 131 GEKRSLLFSD-----------------------ELDRWRIDIEASLNDPCVRDRLAA--- 164
                 L +D                       E+ R+ +D   +L  P     +AA   
Sbjct: 141 WRLWKTLINDSLVDSQTMLRLASLSNTRKKAIKEVQRFLVDARNNLVGPSFLHSVAAPAQ 200

Query: 165 --TENTRSVAIN----RLK-------VFFAELWEGVDPSFLE-LAVENAATDAAEEQQRE 210
             + N   + ++    RLK       V   E+      S ++ L V  A  +     + E
Sbjct: 201 NQSHNESPMEVDKDNGRLKGKASTTVVVVEEMATSTSCSKIDSLPVNEAPKNKCNSVEFE 260

Query: 211 TQEGNLLLDDICITNVVEE--------MDPSTTCQS---DVP-PTT-------------- 244
           T   + + D IC+T++V           +P    QS   +VP P T              
Sbjct: 261 TFANDPVPDSICMTDIVRSDVAIEETNQEPQMENQSKDANVPNPQTCLNINNDEANLTKA 320

Query: 245 -----------TNAHAHEGETS------------NRPQLPSPKRKRVSPLKKYEPRNVIK 281
                      ++A  HE + S            +R +L SP+ K++SPLK+YEP+ + K
Sbjct: 321 TSHHPSLMNPNSSARTHEWDDSIDGLQAGTVRGTSRIRLRSPETKKLSPLKEYEPKKITK 380

Query: 282 RRTTRKWSQLEEETLEKAVNKFGIGNWKLMLNAHKDVFERRTDGDLKDKWRNMRR 336
           RR  +KWSQ E + L+  +   G GNWK +L ++   F+ RT+ DLKDKWRNM+R
Sbjct: 381 RRKKKKWSQWEVDNLKTGIEVIGEGNWKSILRSYD--FDERTEVDLKDKWRNMKR 433


>Medtr3g467090.3 | myb-like DNA-binding domain protein | HC |
           chr3:27648325-27654367 | 20130731
          Length = 620

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 15/196 (7%)

Query: 1   MDGDTGRWALEFFIGKRIINNTLIQEIIRTIKVPPNPNSYFIKSXXXXXXXXXXXXXXXX 60
           M+ +   W +EF +    + + LIQ+ + T+      +S   K+                
Sbjct: 1   MNENISNWIMEFLLRNTTVPDPLIQKTL-TLLPLSGADSRLKKTLLLRVLQTHILNASIS 59

Query: 61  XXXXXXXXXXXXVLRSEGSPVSASFTAAYCAVAVECTLKYI--KLEGSIPRYFDSVKTIW 118
                       + R +G  +S +F +AYCAVAVECT+KY+    E     YF +V+ IW
Sbjct: 60  EASLQILEHLEEIYRDDGVSISNAFQSAYCAVAVECTVKYLINSPEDPSGEYFSAVRRIW 119

Query: 119 WKRVMNMKPSPGGEKRSLLFSDELDRWRIDIEASLNDPCVRDRLAATENTRSVAINRLKV 178
                       G + S L SD   +W  +IE +L D  V +RL    NTR  A+  +K 
Sbjct: 120 R-----------GRRGSGLVSDGFVQWGEEIEGALWDVRVAERLVGL-NTRRDAVIEVKR 167

Query: 179 FFAELWEGVDPSFLEL 194
           F  E W  +  SFL+L
Sbjct: 168 FLKEAWGSMGDSFLDL 183



 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 58/114 (50%), Gaps = 13/114 (11%)

Query: 231 DPSTTCQSDVPPTTTNAHAHEGETSNRPQLPSPKRKRVSPLKKYE--------PRNVIKR 282
           +PS  C SD  P  +N          RP L     +R S  + YE        P+  + R
Sbjct: 512 EPSVPCSSD-RPNCSNGSRPNYSNDRRPNL----MRRASYAQTYEWDDSIENLPQQSLPR 566

Query: 283 RTTRKWSQLEEETLEKAVNKFGIGNWKLMLNAHKDVFERRTDGDLKDKWRNMRR 336
           R  RKW+ LEEETL   V  FG GNW+ +L+ +  +FE R   DLKDKWRNM R
Sbjct: 567 RKKRKWTSLEEETLRAGVRMFGEGNWRTILDFYSTIFEYRNGVDLKDKWRNMMR 620


>Medtr3g467090.2 | myb-like DNA-binding domain protein | HC |
           chr3:27648325-27654367 | 20130731
          Length = 620

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 15/196 (7%)

Query: 1   MDGDTGRWALEFFIGKRIINNTLIQEIIRTIKVPPNPNSYFIKSXXXXXXXXXXXXXXXX 60
           M+ +   W +EF +    + + LIQ+ + T+      +S   K+                
Sbjct: 1   MNENISNWIMEFLLRNTTVPDPLIQKTL-TLLPLSGADSRLKKTLLLRVLQTHILNASIS 59

Query: 61  XXXXXXXXXXXXVLRSEGSPVSASFTAAYCAVAVECTLKYI--KLEGSIPRYFDSVKTIW 118
                       + R +G  +S +F +AYCAVAVECT+KY+    E     YF +V+ IW
Sbjct: 60  EASLQILEHLEEIYRDDGVSISNAFQSAYCAVAVECTVKYLINSPEDPSGEYFSAVRRIW 119

Query: 119 WKRVMNMKPSPGGEKRSLLFSDELDRWRIDIEASLNDPCVRDRLAATENTRSVAINRLKV 178
                       G + S L SD   +W  +IE +L D  V +RL    NTR  A+  +K 
Sbjct: 120 R-----------GRRGSGLVSDGFVQWGEEIEGALWDVRVAERLVGL-NTRRDAVIEVKR 167

Query: 179 FFAELWEGVDPSFLEL 194
           F  E W  +  SFL+L
Sbjct: 168 FLKEAWGSMGDSFLDL 183



 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 58/114 (50%), Gaps = 13/114 (11%)

Query: 231 DPSTTCQSDVPPTTTNAHAHEGETSNRPQLPSPKRKRVSPLKKYE--------PRNVIKR 282
           +PS  C SD  P  +N          RP L     +R S  + YE        P+  + R
Sbjct: 512 EPSVPCSSD-RPNCSNGSRPNYSNDRRPNL----MRRASYAQTYEWDDSIENLPQQSLPR 566

Query: 283 RTTRKWSQLEEETLEKAVNKFGIGNWKLMLNAHKDVFERRTDGDLKDKWRNMRR 336
           R  RKW+ LEEETL   V  FG GNW+ +L+ +  +FE R   DLKDKWRNM R
Sbjct: 567 RKKRKWTSLEEETLRAGVRMFGEGNWRTILDFYSTIFEYRNGVDLKDKWRNMMR 620


>Medtr3g467090.1 | myb-like DNA-binding domain protein | HC |
           chr3:27648325-27654367 | 20130731
          Length = 620

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 15/196 (7%)

Query: 1   MDGDTGRWALEFFIGKRIINNTLIQEIIRTIKVPPNPNSYFIKSXXXXXXXXXXXXXXXX 60
           M+ +   W +EF +    + + LIQ+ + T+      +S   K+                
Sbjct: 1   MNENISNWIMEFLLRNTTVPDPLIQKTL-TLLPLSGADSRLKKTLLLRVLQTHILNASIS 59

Query: 61  XXXXXXXXXXXXVLRSEGSPVSASFTAAYCAVAVECTLKYI--KLEGSIPRYFDSVKTIW 118
                       + R +G  +S +F +AYCAVAVECT+KY+    E     YF +V+ IW
Sbjct: 60  EASLQILEHLEEIYRDDGVSISNAFQSAYCAVAVECTVKYLINSPEDPSGEYFSAVRRIW 119

Query: 119 WKRVMNMKPSPGGEKRSLLFSDELDRWRIDIEASLNDPCVRDRLAATENTRSVAINRLKV 178
                       G + S L SD   +W  +IE +L D  V +RL    NTR  A+  +K 
Sbjct: 120 R-----------GRRGSGLVSDGFVQWGEEIEGALWDVRVAERLVGL-NTRRDAVIEVKR 167

Query: 179 FFAELWEGVDPSFLEL 194
           F  E W  +  SFL+L
Sbjct: 168 FLKEAWGSMGDSFLDL 183



 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 58/114 (50%), Gaps = 13/114 (11%)

Query: 231 DPSTTCQSDVPPTTTNAHAHEGETSNRPQLPSPKRKRVSPLKKYE--------PRNVIKR 282
           +PS  C SD  P  +N          RP L     +R S  + YE        P+  + R
Sbjct: 512 EPSVPCSSD-RPNCSNGSRPNYSNDRRPNL----MRRASYAQTYEWDDSIENLPQQSLPR 566

Query: 283 RTTRKWSQLEEETLEKAVNKFGIGNWKLMLNAHKDVFERRTDGDLKDKWRNMRR 336
           R  RKW+ LEEETL   V  FG GNW+ +L+ +  +FE R   DLKDKWRNM R
Sbjct: 567 RKKRKWTSLEEETLRAGVRMFGEGNWRTILDFYSTIFEYRNGVDLKDKWRNMMR 620