Miyakogusa Predicted Gene

Lj1g3v3317290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3317290.1 Non Characterized Hit- tr|I1N9I8|I1N9I8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,58.9,0.00000000005,seg,NULL,
NODE_41709_length_822_cov_38.257908.path1.1
         (96 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g095090.1 | transmembrane protein, putative | HC | chr7:38...   142   9e-35

>Medtr7g095090.1 | transmembrane protein, putative | HC |
           chr7:38013311-38015913 | 20130731
          Length = 171

 Score =  142 bits (357), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 65/96 (67%), Positives = 74/96 (77%)

Query: 1   MEGYLNQLSLEYDSVWDTKPSWCQPWXXXXXXXXXXXXSWLVLQSVIVTSFISLLIGAWW 60
           M+GYLN LSLEY+SVWDTKPSWCQPW            SWL+  S+ VTS ISLLI AWW
Sbjct: 76  MDGYLNNLSLEYESVWDTKPSWCQPWTITLTGVSIISISWLIFNSIFVTSAISLLIFAWW 135

Query: 61  YIFLYSYPKGYSEMIAERRKRVTNGFEDTFGQSKQQ 96
           YIFLYSYPK YS MIAERR++VT+G EDTFG+ K+Q
Sbjct: 136 YIFLYSYPKAYSAMIAERREKVTDGVEDTFGRRKKQ 171