Miyakogusa Predicted Gene
- Lj1g3v2628740.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2628740.3 tr|G7L3K0|G7L3K0_MEDTR DEAD-box ATP-dependent RNA
helicase OS=Medicago truncatula GN=MTR_7g076820
PE,82.35,0.000000000000003,DEAD-like helicases superfamily,Helicase,
superfamily 1/2, ATP-binding domain; helicase superfamily
,CUFF.29479.3
(521 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 852 0.0
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 850 0.0
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 846 0.0
Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC | sc... 563 e-160
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 283 2e-76
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 283 3e-76
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 282 5e-76
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 282 7e-76
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 281 8e-76
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 281 1e-75
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 274 2e-73
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 259 6e-69
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 257 2e-68
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 256 5e-68
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 256 5e-68
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 216 3e-56
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 216 4e-56
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 216 4e-56
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 213 3e-55
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 213 3e-55
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 212 6e-55
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 212 6e-55
Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 212 6e-55
Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like prote... 210 3e-54
Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like prote... 210 3e-54
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 209 5e-54
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 209 7e-54
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 209 7e-54
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 209 7e-54
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 204 2e-52
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 203 4e-52
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 201 1e-51
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 200 2e-51
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 200 2e-51
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 200 2e-51
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 200 2e-51
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 200 2e-51
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 200 2e-51
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 200 2e-51
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 200 2e-51
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 200 2e-51
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 200 2e-51
Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 200 2e-51
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 199 6e-51
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 199 6e-51
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 199 7e-51
Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like prote... 198 8e-51
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 196 4e-50
Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like prote... 194 2e-49
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 191 2e-48
Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 188 1e-47
Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like prote... 187 1e-47
Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 185 1e-46
Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family pro... 182 7e-46
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 180 2e-45
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 179 4e-45
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 179 5e-45
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 179 6e-45
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 179 6e-45
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 178 1e-44
Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like prote... 178 1e-44
Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family pro... 177 2e-44
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 175 1e-43
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 175 1e-43
Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 175 1e-43
Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family pro... 170 3e-42
Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 169 7e-42
Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 165 8e-41
Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 160 4e-39
Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 157 2e-38
Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like prote... 156 4e-38
Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like prote... 155 1e-37
Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like prote... 155 1e-37
Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like prote... 155 1e-37
Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like prote... 155 1e-37
Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 154 2e-37
Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family pro... 152 1e-36
Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like prote... 151 2e-36
Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like prote... 146 4e-35
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 145 7e-35
Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 144 2e-34
Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 138 1e-32
Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 131 2e-30
Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like prote... 129 7e-30
Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like prote... 128 1e-29
Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like prote... 124 3e-28
Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like prote... 124 3e-28
Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like prote... 121 2e-27
Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC | chr... 120 5e-27
Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC | chr... 120 5e-27
Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC | chr... 119 6e-27
Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC | chr... 119 6e-27
Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC | chr... 119 6e-27
Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 117 2e-26
Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 115 7e-26
Medtr4g077370.1 | DEAD-box helicase family protein | LC | chr4:2... 104 3e-22
Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 103 3e-22
Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like prote... 100 4e-21
Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like prote... 99 1e-20
Medtr8g031340.1 | DEAD-box helicase family protein | LC | chr8:1... 98 2e-20
Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like prote... 98 2e-20
Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 91 3e-18
Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC | s... 90 5e-18
Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC | ... 89 1e-17
Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC | ... 89 1e-17
Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 89 1e-17
Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like prote... 81 2e-15
Medtr8g032230.1 | DEAD-box helicase family protein | HC | chr8:1... 80 6e-15
Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 78 2e-14
Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein... 72 2e-12
Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like prote... 68 2e-11
Medtr2g088350.1 | helicase family carboxy-terminal domain protei... 67 5e-11
Medtr8g018330.1 | eukaryotic translation initiation factor 4A1 |... 66 9e-11
Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like prote... 65 2e-10
Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative ... 64 3e-10
Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative ... 64 3e-10
Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative ... 63 6e-10
Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative ... 63 6e-10
Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 |... 63 7e-10
Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC | chr3:28... 62 2e-09
Medtr8g079452.1 | helicase family carboxy-terminal domain protei... 59 1e-08
Medtr6g040070.1 | DEAD/DEAH-box helicase | HC | chr6:14397151-14... 59 2e-08
Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein... 57 3e-08
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/433 (94%), Positives = 422/433 (97%), Gaps = 1/433 (0%)
Query: 90 WLRRTQLGGN-DTNVVEEVEKTVQSESADPSSQDWKARLKIPPPDTRYQTEDVTATKGNE 148
WLRR QLGG DTNVVEEVEKTVQSE+ D SSQDWKARLK+PP DTRY+TEDVTATKGNE
Sbjct: 82 WLRRNQLGGGTDTNVVEEVEKTVQSEANDSSSQDWKARLKLPPADTRYRTEDVTATKGNE 141
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FEDYFLKRELLMGIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKTAAF IPALEK
Sbjct: 142 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEK 201
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
ID DNN+IQVVILVPTRELALQTSQVCKELGKHL+IQVMVTTGGTSLKDDIMRLYQPVHL
Sbjct: 202 IDQDNNIIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHL 261
Query: 269 LVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSA 328
LVGTPGRILDLAKKGVC+LKDCSMLVMDEADKLLSPEFQPSIEQLIQFL P RQILM+SA
Sbjct: 262 LVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQILMFSA 321
Query: 329 TYPVTVKDFKERYLRKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI 388
T+PVTVKDFK+RYLRKPY+INLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI
Sbjct: 322 TFPVTVKDFKDRYLRKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI 381
Query: 389 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 448
IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI
Sbjct: 382 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 441
Query: 449 DIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIK 508
DIQAVNVVINFDFPKN+ETYLHRVGRSGR+GHLGLAVNLITYEDRFNLYRIEQELGTEIK
Sbjct: 442 DIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK 501
Query: 509 QIPPHIDQAIYCR 521
QIPP IDQAIYCR
Sbjct: 502 QIPPFIDQAIYCR 514
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/433 (93%), Positives = 422/433 (97%), Gaps = 1/433 (0%)
Query: 90 WLRRTQLGGN-DTNVVEEVEKTVQSESADPSSQDWKARLKIPPPDTRYQTEDVTATKGNE 148
WLRR QLGG DTNVVEEVEKTVQSE+ DPSSQDWK +LK+PP DTRY+TEDVTATKGNE
Sbjct: 84 WLRRNQLGGGTDTNVVEEVEKTVQSETNDPSSQDWKEKLKLPPADTRYRTEDVTATKGNE 143
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FEDYFLKRELLMGIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKTAAF IPALEK
Sbjct: 144 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEK 203
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
ID DNN+IQVVILVPTRELALQTSQVCKELGKHL+IQVMVTTGGTSLKDDIMRLYQPVHL
Sbjct: 204 IDQDNNIIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHL 263
Query: 269 LVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSA 328
LVGTPGRILDLAKKGVC+LKDCSMLVMDEADKLLSPEFQPSIEQLIQFL P RQILM+SA
Sbjct: 264 LVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQILMFSA 323
Query: 329 TYPVTVKDFKERYLRKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI 388
T+PVTVKDFK+RYLRKPY+INLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI
Sbjct: 324 TFPVTVKDFKDRYLRKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI 383
Query: 389 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 448
IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI
Sbjct: 384 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 443
Query: 449 DIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIK 508
DIQAVNVVINFDFPKN+ETYLHRVGRSGR+GHLGLAVNLITYEDRFNLYRIEQELGTEIK
Sbjct: 444 DIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK 503
Query: 509 QIPPHIDQAIYCR 521
QIPP IDQA+YCR
Sbjct: 504 QIPPFIDQAVYCR 516
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/433 (93%), Positives = 420/433 (96%), Gaps = 1/433 (0%)
Query: 90 WLRRTQLGGN-DTNVVEEVEKTVQSESADPSSQDWKARLKIPPPDTRYQTEDVTATKGNE 148
WLRR QLGG DTNVVEEVEKTVQSE+ DPSSQDWKARLKIP DTRY+TEDVTATKGNE
Sbjct: 91 WLRRNQLGGGTDTNVVEEVEKTVQSETNDPSSQDWKARLKIPAADTRYRTEDVTATKGNE 150
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FEDYFLKRELLMGIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKTAAF IPALEK
Sbjct: 151 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEK 210
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
ID D NVIQVVILVPTRELALQTSQVCKELGKHL+IQVMVTTGGTSLKDDIMRLYQPVHL
Sbjct: 211 IDQDKNVIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHL 270
Query: 269 LVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSA 328
LVGTPGRILDLAKKGVC+LKDCSMLVMDEADKLLSPEF+PSIEQLIQFL NRQIL++SA
Sbjct: 271 LVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFKPSIEQLIQFLPSNRQILLFSA 330
Query: 329 TYPVTVKDFKERYLRKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI 388
T+PVTVKDF +RYLRKPY+INLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI
Sbjct: 331 TFPVTVKDFNDRYLRKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI 390
Query: 389 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 448
IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI
Sbjct: 391 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 450
Query: 449 DIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIK 508
DIQAVNVVINFDFPKN+ETYLHRVGRSGR+GHLGLAVNL+TYEDRFNLYRIEQELGTEIK
Sbjct: 451 DIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLVTYEDRFNLYRIEQELGTEIK 510
Query: 509 QIPPHIDQAIYCR 521
QIPP IDQAIYCR
Sbjct: 511 QIPPFIDQAIYCR 523
>Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC |
scaffold0915:3555-1057 | 20130731
Length = 282
Score = 563 bits (1450), Expect = e-160, Method: Compositional matrix adjust.
Identities = 269/282 (95%), Positives = 277/282 (98%)
Query: 160 MGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVV 219
MGIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKTAAF IPALEKID DNN+IQVV
Sbjct: 1 MGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQVV 60
Query: 220 ILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL 279
ILVPTRELALQTSQVCKELGKHL+IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL
Sbjct: 61 ILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL 120
Query: 280 AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKE 339
AKKGVC+LKDCSMLVMDEADKLLSPEFQPSIEQLIQFL P RQILM+SAT+PVTVKDF +
Sbjct: 121 AKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQILMFSATFPVTVKDFND 180
Query: 340 RYLRKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 399
RYLRKPY+INLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL
Sbjct: 181 RYLRKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 240
Query: 400 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 441
LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT
Sbjct: 241 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 282
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/388 (39%), Positives = 229/388 (59%), Gaps = 13/388 (3%)
Query: 140 DVTATKGNEFE-------DYF----LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDIL 188
D+ A G+EF D F L LL GIY GFEKPS IQ+ I G D++
Sbjct: 22 DLIAADGDEFWTSYDEVYDSFDAMGLAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVI 81
Query: 189 ARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMV 248
+A++GTGKTA FC L+++D++ Q ++L PTRELA Q +V + LG +L ++V
Sbjct: 82 QQAQSGTGKTATFCSGVLQQLDYNVTQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHA 141
Query: 249 TTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQP 308
GGTS+++D L VH++VGTPGR+ D+ ++ M V+DEAD++LS F+
Sbjct: 142 CVGGTSVREDQRILSTGVHVVVGTPGRVFDMLRRQSLHPDYIKMFVLDEADEMLSRGFKD 201
Query: 309 SIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLM-DELTLKGITQFYAFVE 367
I + Q L Q+ ++SAT P + +++ KP I + DELTL+GI QFY VE
Sbjct: 202 QIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVE 261
Query: 368 -ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRV 426
E K+ L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ +
Sbjct: 262 KEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDII 321
Query: 427 FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVN 486
+FR+G+ R L+ TDL RGID+Q V++VINFD P E YLHR+GRSGR+G G+A+N
Sbjct: 322 MREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAIN 381
Query: 487 LITYEDRFNLYRIEQELGTEIKQIPPHI 514
+T ED L I++ ++++P ++
Sbjct: 382 FVTKEDEGMLRDIQKFYNVLVEELPSNV 409
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 232/383 (60%), Gaps = 4/383 (1%)
Query: 138 TEDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGK 197
TE V A FE+ +K +LL GIY+ GFEKPS IQ+ ++ + G D++A+A++GTGK
Sbjct: 26 TEGVKAI--GSFEEMGIKDDLLRGIYQYGFEKPSAIQQRAVAPIIQGRDVIAQAQSGTGK 83
Query: 198 TAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKD 257
T+ + + +D +Q +I+ PTRELA QT +V +G + IQ GG S+ +
Sbjct: 84 TSMIALTVCQVVDTSVREVQALIVSPTRELASQTEKVILTIGDFINIQAHACIGGKSVGE 143
Query: 258 DIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFL 317
DI +L VH++ GTPGR+ D+ K+ + +LV+DE+D++LS F+ I + ++L
Sbjct: 144 DIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYL 203
Query: 318 SPNRQILMYSATYPVTVKDFKERYLRKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCL 375
P+ Q+ + SAT P + + +++ P I + DELTL+GI QF+ VE E K L
Sbjct: 204 PPDLQVCLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTL 263
Query: 376 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 435
L+ L I Q++IFCN+ +V+ L +K+ ++ +H M Q R+ + +FR G
Sbjct: 264 CDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVSAMHGDMPQRERDAIMGEFRAGTT 323
Query: 436 RNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFN 495
R L+ TD++ RG+D+Q V++VIN+D P N E Y+HR+GRSGR+G G+A+N + +D
Sbjct: 324 RVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKI 383
Query: 496 LYRIEQELGTEIKQIPPHIDQAI 518
L IEQ T+I ++P ++ I
Sbjct: 384 LRDIEQYYSTQIDEMPMNVADLI 406
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 152/388 (39%), Positives = 228/388 (58%), Gaps = 13/388 (3%)
Query: 140 DVTATKGNEFEDYF-----------LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDIL 188
D+ A G+EF + L LL GIY GFEKPS IQ+ I G D++
Sbjct: 39 DLIAADGDEFWTSYDEVYDSFDAMGLAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVI 98
Query: 189 ARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMV 248
+A++GTGKTA FC L+++D++ Q ++L PTRELA Q +V + LG +L ++V
Sbjct: 99 QQAQSGTGKTATFCSGVLQQLDYNVTQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHA 158
Query: 249 TTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQP 308
GGTS+++D L VH++VGTPGR+ D+ ++ M V+DEAD++LS F+
Sbjct: 159 CVGGTSVREDQRILSTGVHVVVGTPGRVFDMLRRQSLHPDYIKMFVLDEADEMLSRGFKD 218
Query: 309 SIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLM-DELTLKGITQFYAFVE 367
I + Q L Q+ ++SAT P + +++ KP I + DELTL+GI QFY VE
Sbjct: 219 QIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVE 278
Query: 368 -ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRV 426
E K+ L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ +
Sbjct: 279 KEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDII 338
Query: 427 FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVN 486
+FR+G+ R L+ TDL RGID+Q V++VINFD P E YLHR+GRSGR+G G+A+N
Sbjct: 339 MREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAIN 398
Query: 487 LITYEDRFNLYRIEQELGTEIKQIPPHI 514
+T ED L I++ ++++P ++
Sbjct: 399 FVTKEDEGMLRDIQKFYNVLVEELPSNV 426
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 282 bits (721), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 149/369 (40%), Positives = 226/369 (61%), Gaps = 4/369 (1%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F+ L LL GIY GFEKPS IQ+ I + G D++ +A++GTGKTA FC L++
Sbjct: 42 FDAMGLLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQ 101
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
+D+ Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 102 LDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQTGVHV 161
Query: 269 LVGTPGRILDLAKKGVCILKDC-SMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYS 327
+VGTPGR+ D+ ++ + DC M V+DEAD++LS F+ I + Q L P Q+ ++S
Sbjct: 162 VVGTPGRVFDMLRRQ-SLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 220
Query: 328 ATYPVTVKDFKERYLRKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQIN 385
AT P + +++ KP I + DELTL+GI QFY V+ E K+ L L+ L I
Sbjct: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAIT 280
Query: 386 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 445
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 281 QSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 340
Query: 446 RGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGT 505
RGID+Q V++VIN+D P E YLHR+GRSGR+G G+A+N +T ED L I++
Sbjct: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLEDARMLADIQKFYNV 400
Query: 506 EIKQIPPHI 514
++++P ++
Sbjct: 401 IVEELPSNV 409
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 149/369 (40%), Positives = 226/369 (61%), Gaps = 4/369 (1%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F+ L LL GIY GFEKPS IQ+ I + G D++ +A++GTGKTA FC L++
Sbjct: 26 FDAMGLLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQ 85
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
+D+ Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 86 LDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQTGVHV 145
Query: 269 LVGTPGRILDLAKKGVCILKDC-SMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYS 327
+VGTPGR+ D+ ++ + DC M V+DEAD++LS F+ I + Q L P Q+ ++S
Sbjct: 146 VVGTPGRVFDMLRRQ-SLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 204
Query: 328 ATYPVTVKDFKERYLRKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQIN 385
AT P + +++ KP I + DELTL+GI QFY V+ E K+ L L+ L I
Sbjct: 205 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAIT 264
Query: 386 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 445
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 265 QSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 324
Query: 446 RGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGT 505
RGID+Q V++VIN+D P E YLHR+GRSGR+G G+A+N +T ED L I++
Sbjct: 325 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLEDARMLADIQKFYNV 384
Query: 506 EIKQIPPHI 514
++++P ++
Sbjct: 385 IVEELPSNV 393
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 224/370 (60%), Gaps = 2/370 (0%)
Query: 147 NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
+ F+ L+ LL GIY GFEKPS IQ+ I + G D++ +A++GTGKTA FC L
Sbjct: 40 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGIL 99
Query: 207 EKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 266
+++D+ Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L V
Sbjct: 100 QQLDYSVTECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGV 159
Query: 267 HLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMY 326
H++VGTPGR+ D+ ++ M V+DEAD++LS F+ I + Q L Q+ ++
Sbjct: 160 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVF 219
Query: 327 SATYPVTVKDFKERYLRKPYVINLM-DELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQI 384
SAT P + +++ KP I + DELTL+GI QFY V+ E K+ L L+ L I
Sbjct: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLDTLCDLYETLAI 279
Query: 385 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 444
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 280 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 339
Query: 445 TRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELG 504
RGID+Q V++VIN+D P E YLHR+GRSGR+G G+A+N +T +D L I++
Sbjct: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLSDIQKFYN 399
Query: 505 TEIKQIPPHI 514
I+++P ++
Sbjct: 400 VLIEELPSNV 409
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 222/370 (60%), Gaps = 2/370 (0%)
Query: 147 NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
+ F+ L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L
Sbjct: 40 DSFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
Query: 207 EKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 266
+++D+ Q ++L PTRELA Q +V + LG L ++V GGTS+++D L V
Sbjct: 100 QQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDFLGVKVHACVGGTSVREDQRILQAGV 159
Query: 267 HLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMY 326
H +VGTPGR+ D+ ++ + M V+DEAD++LS F+ I + Q L Q+ ++
Sbjct: 160 HTVVGTPGRVFDMLRRQSLRSECIKMFVLDEADEMLSRGFKDQIYDIFQQLPGKIQVGVF 219
Query: 327 SATYPVTVKDFKERYLRKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQI 384
SAT P + +++ KP I + DELTL+GI QFY V+ E K+ L L+ L I
Sbjct: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAI 279
Query: 385 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 444
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 280 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 339
Query: 445 TRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELG 504
RGID+Q V++VIN+D P E YLHR+GRSGR+G G+++N +T ED L I++
Sbjct: 340 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTGEDARMLADIQKFYN 399
Query: 505 TEIKQIPPHI 514
I+++P ++
Sbjct: 400 VTIEELPSNV 409
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 146/378 (38%), Positives = 222/378 (58%), Gaps = 8/378 (2%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F D+ LK ELL I + GFE PS +Q E IP A+ G D+L +AK+G GKTA F + L++
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSTLQQ 107
Query: 209 IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLK-IQVMVTTGGTSLK--DDIMRLYQP 265
ID + +IL TRELA Q + +L ++V V GG ++K D+++ P
Sbjct: 108 IDPVPGQVSALILCHTRELAYQICHEFERFSTYLADLKVAVFYGGVNIKVHKDLLKNECP 167
Query: 266 VHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLL-SPEFQPSIEQLIQFLSPNRQIL 324
H++VGTPGRIL LA+ LK+ ++DE DK+L S + + ++ + + ++Q++
Sbjct: 168 -HIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVM 226
Query: 325 MYSATYPVTVKDFKERYLRKPYVINLMDE--LTLKGITQFYAFVEERQKVHCLNTLFSKL 382
M+SAT ++ +++++ P I + DE LTL G+ Q Y ++E +K LN L L
Sbjct: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDAL 286
Query: 383 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 442
NQ +IF SV+R L K + E + IH+ M Q+ R + + F+ G R LV TD
Sbjct: 287 DFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATD 346
Query: 443 LFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFN-LYRIEQ 501
L RGIDI+ VN+VIN+D P +A+TYLHRVGR+GR+G GLA+ ++ + L ++
Sbjct: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSSDVDVLNNVQS 406
Query: 502 ELGTEIKQIPPHIDQAIY 519
+IKQ+P ID + Y
Sbjct: 407 RFEVDIKQLPEQIDTSTY 424
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/395 (36%), Positives = 227/395 (57%), Gaps = 8/395 (2%)
Query: 132 PDTRYQTEDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARA 191
P T + + F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +A
Sbjct: 108 PTTESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 167
Query: 192 KNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHL-KIQVMVTT 250
K+G GKTA F + L++ID + ++L TRELA Q + +L I+V V
Sbjct: 168 KSGMGKTAVFVLSTLQQIDPVPGQVAALVLCHTRELAYQICHEVERFSTYLPDIKVAVFY 227
Query: 251 GGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLL-SPEFQ 307
GG ++K D+++ P H++VGTPGRIL L + LK+ ++DE DK+L S + +
Sbjct: 228 GGVNIKVHKDLLKNECP-HIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMR 286
Query: 308 PSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDE--LTLKGITQFYAF 365
++++ + ++Q++M+SAT ++ +++++ P I + DE LTL G+ Q Y
Sbjct: 287 KDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK 346
Query: 366 VEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 425
++E +K LN L L NQ +IF SV+R L K + E + IH+ M Q+ R +
Sbjct: 347 LQEPEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLK 406
Query: 426 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAV 485
+ F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GR+G GLA+
Sbjct: 407 RYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 466
Query: 486 NLITYE-DRFNLYRIEQELGTEIKQIPPHIDQAIY 519
++ D L +++ +IK++P ID + Y
Sbjct: 467 TFVSSAGDSEVLNQVQSRFEVDIKELPEQIDTSTY 501
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 230/402 (57%), Gaps = 15/402 (3%)
Query: 132 PDTRYQTEDVTATK-------GNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTG 184
PDT + ATK + F D+ LK ELL I + GFE PS +Q E IP A+ G
Sbjct: 24 PDTNGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG 83
Query: 185 SDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHL-K 243
D++ +AK+G GKTA F + L++ID + ++L TRELA Q + +L
Sbjct: 84 MDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYLPD 143
Query: 244 IQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKL 301
++V V GG ++K D+++ P ++VGTPGRIL LA++ LK+ V+DE DK+
Sbjct: 144 LKVAVFYGGVNIKVHKDLLKNECP-QIVVGTPGRILALAREKNLSLKNVRHFVLDECDKM 202
Query: 302 L-SPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDE--LTLKG 358
L S + + ++ + + ++Q++M+SAT ++ +++++ P I + DE LTL G
Sbjct: 203 LESLDMRKDVQDIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
Query: 359 ITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM 418
+ Q Y ++E +K LN L L NQ +IF SV+R L + + E + IH+ M
Sbjct: 263 LVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGM 322
Query: 419 LQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRY 478
Q+ R + + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GR+
Sbjct: 323 SQEERLKRYRGFKEGHSRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
Query: 479 GHLGLAVNLITYEDRFN-LYRIEQELGTEIKQIPPHIDQAIY 519
G GLA+ ++ + L ++ +IKQ+P ID + Y
Sbjct: 383 GTKGLAITFVSCSSDVDVLNNVQSRFEIDIKQLPEQIDTSTY 424
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 230/402 (57%), Gaps = 15/402 (3%)
Query: 132 PDTRYQTEDVTATK-------GNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTG 184
PDT + ATK + F D+ LK ELL I + GFE PS +Q E IP A+ G
Sbjct: 24 PDTNGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG 83
Query: 185 SDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHL-K 243
D++ +AK+G GKTA F + L++ID + ++L TRELA Q + +L
Sbjct: 84 MDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYLPD 143
Query: 244 IQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKL 301
++V V GG ++K D+++ P ++VGTPGRIL LA++ LK+ V+DE DK+
Sbjct: 144 LKVAVFYGGVNIKVHKDLLKNECP-QIVVGTPGRILALAREKNLSLKNVRHFVLDECDKM 202
Query: 302 L-SPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDE--LTLKG 358
L S + + ++ + + ++Q++M+SAT ++ +++++ P I + DE LTL G
Sbjct: 203 LESLDMRKDVQDIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
Query: 359 ITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM 418
+ Q Y ++E +K LN L L NQ +IF SV+R L + + E + IH+ M
Sbjct: 263 LVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGM 322
Query: 419 LQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRY 478
Q+ R + + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GR+
Sbjct: 323 SQEERLKRYRGFKEGHSRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
Query: 479 GHLGLAVNLITYEDRFN-LYRIEQELGTEIKQIPPHIDQAIY 519
G GLA+ ++ + L ++ +IKQ+P ID + Y
Sbjct: 383 GTKGLAITFVSCSSDVDVLNNVQSRFEIDIKQLPEQIDTSTY 424
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 209/381 (54%), Gaps = 13/381 (3%)
Query: 141 VTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAA 200
V +G E + +E++ + +KG K PIQ + A+ G D++ RA+ GTGKT A
Sbjct: 83 VNGDEGLEIAKLGISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLA 142
Query: 201 FCIPALEKI---DHDNNVIQ---VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTS 254
F IP L+KI + N + ++L PTRELA Q + K+ +L+I + GG
Sbjct: 143 FGIPILDKIIKFNAKNGKRRDPLALVLAPTRELARQVEKEFKDAAPNLEI--ISLYGGMP 200
Query: 255 LKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLI 314
++ I +L V ++VGTPGR++DL K+G LKD + +V+DEAD++L FQ ++E ++
Sbjct: 201 IQQQISKLGSGVDIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETIL 260
Query: 315 QFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLM---DELTLKGITQFYAFVEERQK 371
Q L RQ LM+SAT P +K+ YL KP I+L+ D+ GI+ + K
Sbjct: 261 QKLPSKRQTLMFSATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSK 320
Query: 372 VHCLNTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDF 430
L L ++ + + I+F + + L+ I C +H + Q R R F
Sbjct: 321 AGILVPLITEHAKGGKCIVFTQTKRDADRLS-HIMAKSIKCEALHGDISQTQRERTLTGF 379
Query: 431 RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITY 490
RN LV TD+ +RG+DI V++VI+++ P N+E ++HR GR+GR G G A+ + T
Sbjct: 380 RNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTE 439
Query: 491 EDRFNLYRIEQELGTEIKQIP 511
++ IE+++G + K++P
Sbjct: 440 NQSRDVKTIERDVGCKFKELP 460
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 197/387 (50%), Gaps = 26/387 (6%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI---- 209
L +ELL + + G++ PSPIQ +IP+ L D++ A+ G+GKTAAF +P L I
Sbjct: 293 LSQELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 352
Query: 210 ----DHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQP 265
+++ V++ PTRELA Q + +++ I+V+ GG S+++ ++ Q
Sbjct: 353 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQG 412
Query: 266 VHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPN----- 320
+++ TPGR++D ++ +L C+ +V+DEAD+++ F+P + ++ + +
Sbjct: 413 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 472
Query: 321 ------------RQILMYSATYPVTVKDFKERYLRKPYVINLMDELTLKG-ITQFYAFVE 367
R M+SAT P V+ +YLR P V+ + I+Q ++
Sbjct: 473 NEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 532
Query: 368 ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 427
E +K + L L +L +I+F N+ + LAK + + GY +H QD R
Sbjct: 533 ESEKNYKLQRLLDELNDKTAIVFVNTKKSADFLAKNLDKEGYRVTTLHGGKSQDQREISL 592
Query: 428 HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNL 487
FR LV TD+ RGIDI V VIN+D P N E Y HR+GR+GR G G+A
Sbjct: 593 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 652
Query: 488 ITYEDRFNLYRIEQELGTEIKQIPPHI 514
+T +D Y ++Q L +PP +
Sbjct: 653 LTLQDTDVFYELKQMLIQSNSPVPPEL 679
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 209/381 (54%), Gaps = 13/381 (3%)
Query: 141 VTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAA 200
V +G E + +E++ + +KG K PIQ + A+ G D++ RA+ GTGKT A
Sbjct: 83 VNGDEGLEIAKLGISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLA 142
Query: 201 FCIPALEKI---DHDNNVIQ---VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTS 254
F IP L+KI + N + ++L PTRELA Q + K+ +L+I + GG
Sbjct: 143 FGIPILDKIIKFNAKNGKRRDPLALVLAPTRELARQVEKEFKDAAPNLEI--ISLYGGMP 200
Query: 255 LKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLI 314
++ I +L V ++VGTPGR++DL K+G LKD + +V+DEAD++L FQ ++E ++
Sbjct: 201 IQQQISKLGSGVDIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETIL 260
Query: 315 QFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLM---DELTLKGITQFYAFVEERQK 371
Q L RQ LM+SAT P +K+ YL KP I+L+ D+ GI+ + K
Sbjct: 261 QKLPSKRQTLMFSATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSK 320
Query: 372 VHCLNTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDF 430
L L ++ + + I+F + + L+ I C +H + Q R R F
Sbjct: 321 AGILVPLITEHAKGGKCIVFTQTKRDADRLS-HIMAKSIKCEALHGDISQTQRERTLTGF 379
Query: 431 RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITY 490
RN LV TD+ +RG+DI V++VI+++ P N+E ++HR GR+GR G G A+ + T
Sbjct: 380 RNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTE 439
Query: 491 EDRFNLYRIEQELGTEIKQIP 511
++ IE+++G + K++P
Sbjct: 440 NQSRDVKTIERDVGCKFKELP 460
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 196/370 (52%), Gaps = 15/370 (4%)
Query: 137 QTEDVTATKGN------EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILAR 190
Q +VTA+ N F+ E+L + GF P+PIQ ++ PIAL G DI+A
Sbjct: 479 QQHEVTASGDNIPPPFMTFDSTGFPPEILQEVCSAGFSNPTPIQAQTWPIALQGRDIVAI 538
Query: 191 AKNGTGKTAAFCIPAL----EKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQV 246
AK G+GKT + +PA ++ ++ N V++L PTRELA Q + + + ++
Sbjct: 539 AKTGSGKTLGYLMPAFILLRQRRNNSLNGPTVLVLAPTRELATQIQEEVFKFARSSRVSC 598
Query: 247 MVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEF 306
GG + L + ++V TPGR+ D+ + S+LV+DEAD++L F
Sbjct: 599 TCLYGGAPKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGF 658
Query: 307 QPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINL--MDELTL-KGITQFY 363
+P I +++ + P RQ LMY+AT+P V+ L P +N+ +DEL K ITQ+
Sbjct: 659 EPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGNVDELAANKSITQYV 718
Query: 364 AFVEERQKVHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDH 422
V + +K L + S+ + ++ IIFC++ + LA+ I + IH Q
Sbjct: 719 EVVPQMEKQRRLEQILRSQERGSKIIIFCSTKKLCDQLARSIGRT-FGAAAIHGDKSQGE 777
Query: 423 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLG 482
R+ V FR G LV TD+ RG+DI+ + VVIN+DFP E Y+HR+GR+GR G G
Sbjct: 778 RDWVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATG 837
Query: 483 LAVNLITYED 492
+A + +D
Sbjct: 838 VAYTFFSEQD 847
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 196/370 (52%), Gaps = 15/370 (4%)
Query: 137 QTEDVTATKGN------EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILAR 190
Q +VTA+ N F+ E+L + GF P+PIQ ++ PIAL G DI+A
Sbjct: 479 QQHEVTASGDNIPPPFMTFDSTGFPPEILQEVCSAGFSNPTPIQAQTWPIALQGRDIVAI 538
Query: 191 AKNGTGKTAAFCIPAL----EKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQV 246
AK G+GKT + +PA ++ ++ N V++L PTRELA Q + + + ++
Sbjct: 539 AKTGSGKTLGYLMPAFILLRQRRNNSLNGPTVLVLAPTRELATQIQEEVFKFARSSRVSC 598
Query: 247 MVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEF 306
GG + L + ++V TPGR+ D+ + S+LV+DEAD++L F
Sbjct: 599 TCLYGGAPKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGF 658
Query: 307 QPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINL--MDELTL-KGITQFY 363
+P I +++ + P RQ LMY+AT+P V+ L P +N+ +DEL K ITQ+
Sbjct: 659 EPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGNVDELAANKSITQYV 718
Query: 364 AFVEERQKVHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDH 422
V + +K L + S+ + ++ IIFC++ + LA+ I + IH Q
Sbjct: 719 EVVPQMEKQRRLEQILRSQERGSKIIIFCSTKKLCDQLARSIGRT-FGAAAIHGDKSQGE 777
Query: 423 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLG 482
R+ V FR G LV TD+ RG+DI+ + VVIN+DFP E Y+HR+GR+GR G G
Sbjct: 778 RDWVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATG 837
Query: 483 LAVNLITYED 492
+A + +D
Sbjct: 838 VAYTFFSEQD 847
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 207/399 (51%), Gaps = 19/399 (4%)
Query: 132 PDTRYQTEDVTATKGN------EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGS 185
PD + ++T T N F E+L + GF P+PIQ +S PIAL
Sbjct: 143 PDAYRRRHEITVTGDNVPPPVTSFASSGFPSEILREVQNAGFSAPTPIQAQSWPIALQSK 202
Query: 186 DILARAKNGTGKTAAFCIPALEKIDHDNNVIQ----VVILVPTRELALQTSQVCKELGKH 241
DI+A AK G+GKT + +PA + NN + V++L PTRELA Q + K
Sbjct: 203 DIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAKMGPTVLVLSPTRELATQIQDEAVKFSKT 262
Query: 242 LKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKL 301
+I GG + + + ++V TPGR+ D+ + L S LV+DEAD++
Sbjct: 263 SRIACTCLYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEADRM 322
Query: 302 LSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINL--MDELTL-KG 358
L F+P I +++ + RQ LM++AT+P V+ L P +N+ +DEL K
Sbjct: 323 LDMGFEPQIRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKS 382
Query: 359 ITQ---FYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIH 415
ITQ +VE+++++ + L S+ Q ++ IIFC++ + LA+ +T + IH
Sbjct: 383 ITQHIEVLTYVEKQRRLETI--LRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIH 439
Query: 416 AKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRS 475
Q R+ V + FR+G LV TD+ RG+D++ + VV+NFDFP E Y+HR+GR+
Sbjct: 440 GDKSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRT 499
Query: 476 GRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 514
GR G G+A +D + + + L +++PP +
Sbjct: 500 GRAGATGIAYTFFGDQDAKHASDLIKILEGANQRVPPEL 538
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 207/399 (51%), Gaps = 19/399 (4%)
Query: 132 PDTRYQTEDVTATKGN------EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGS 185
PD + ++T T N F E+L + GF P+PIQ +S PIAL
Sbjct: 143 PDAYRRRHEITVTGDNVPPPVTSFASSGFPSEILREVQNAGFSAPTPIQAQSWPIALQSK 202
Query: 186 DILARAKNGTGKTAAFCIPALEKIDHDNNVIQ----VVILVPTRELALQTSQVCKELGKH 241
DI+A AK G+GKT + +PA + NN + V++L PTRELA Q + K
Sbjct: 203 DIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAKMGPTVLVLSPTRELATQIQDEAVKFSKT 262
Query: 242 LKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKL 301
+I GG + + + ++V TPGR+ D+ + L S LV+DEAD++
Sbjct: 263 SRIACTCLYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEADRM 322
Query: 302 LSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINL--MDELTL-KG 358
L F+P I +++ + RQ LM++AT+P V+ L P +N+ +DEL K
Sbjct: 323 LDMGFEPQIRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKS 382
Query: 359 ITQ---FYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIH 415
ITQ +VE+++++ + L S+ Q ++ IIFC++ + LA+ +T + IH
Sbjct: 383 ITQHIEVLTYVEKQRRLETI--LRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIH 439
Query: 416 AKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRS 475
Q R+ V + FR+G LV TD+ RG+D++ + VV+NFDFP E Y+HR+GR+
Sbjct: 440 GDKSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRT 499
Query: 476 GRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 514
GR G G+A +D + + + L +++PP +
Sbjct: 500 GRAGATGIAYTFFGDQDAKHASDLIKILEGANQRVPPEL 538
>Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:20527189-20518464 | 20130731
Length = 438
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 207/370 (55%), Gaps = 6/370 (1%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F+D L L+ + G++ P IQ E+IP AL G D++ AK G+GKT AF +P L
Sbjct: 11 FKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALPILHA 70
Query: 209 IDHDN--NVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 266
+ N ++ PTRELA+Q S+ + LG + ++ V GG + +++ +
Sbjct: 71 LLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLP 130
Query: 267 HLLVGTPGRILDLAK--KGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQIL 324
H++VGTPGR+LD K KG + + LV+DEAD+LL+ +F+ S+ +++ + R+
Sbjct: 131 HIIVGTPGRVLDHLKNTKGFSLAR-LKYLVLDEADRLLNEDFEESLNEILGMIPRERRTF 189
Query: 325 MYSATYPVTVKDFKERYLRKPYVINLMDEL-TLKGITQFYAFVEERQKVHCLNTLFSKLQ 383
++SAT V+ + LR P I + T+ + Q Y F+ + K L + S++
Sbjct: 190 LFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLVYILSEMA 249
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
+ S++F + + LLA + LG I+ M Q R + F++G C L+CTD+
Sbjct: 250 GSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDV 309
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQEL 503
+RG+DI AV++VIN+D P N++ Y+HRVGR+ R G G+A++L+ + +IE+ +
Sbjct: 310 ASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKLI 369
Query: 504 GTEIKQIPPH 513
G ++ + P +
Sbjct: 370 GKKLPEYPAN 379
>Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641167-30650711 | 20130731
Length = 438
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 207/370 (55%), Gaps = 6/370 (1%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F+D L L+ + G++ P IQ E+IP AL G D++ A+ G+GKT AF +P L
Sbjct: 11 FKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFALPILHA 70
Query: 209 IDHDN--NVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 266
+ N ++ PTRELA+Q S+ + LG + ++ V GG + +++ +
Sbjct: 71 LLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLP 130
Query: 267 HLLVGTPGRILDLAK--KGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQIL 324
H++VGTPGR+LD K KG + + LV+DEAD+LL+ +F+ S+ +++ + R+
Sbjct: 131 HIIVGTPGRVLDHLKNTKGFSLAR-LKYLVLDEADRLLNEDFEESLNEILGMIPRERRTF 189
Query: 325 MYSATYPVTVKDFKERYLRKPYVINLMDEL-TLKGITQFYAFVEERQKVHCLNTLFSKLQ 383
++SAT V+ + LR P I + T+ + Q Y F+ + K L + +++
Sbjct: 190 LFSATMTKKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMA 249
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
+ S++F + + LLA + LG I+ M Q R + F++G C L+CTD+
Sbjct: 250 GSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDV 309
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQEL 503
+RG+DI AV++VIN+D P N++ Y+HRVGR+ R G G+A++L+ + +IE+ +
Sbjct: 310 ASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKLI 369
Query: 504 GTEIKQIPPH 513
G ++ + P +
Sbjct: 370 GKKLPEYPAN 379
>Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641166-30650890 | 20130731
Length = 438
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 207/370 (55%), Gaps = 6/370 (1%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F+D L L+ + G++ P IQ E+IP AL G D++ A+ G+GKT AF +P L
Sbjct: 11 FKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFALPILHA 70
Query: 209 IDHDN--NVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 266
+ N ++ PTRELA+Q S+ + LG + ++ V GG + +++ +
Sbjct: 71 LLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLP 130
Query: 267 HLLVGTPGRILDLAK--KGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQIL 324
H++VGTPGR+LD K KG + + LV+DEAD+LL+ +F+ S+ +++ + R+
Sbjct: 131 HIIVGTPGRVLDHLKNTKGFSLAR-LKYLVLDEADRLLNEDFEESLNEILGMIPRERRTF 189
Query: 325 MYSATYPVTVKDFKERYLRKPYVINLMDEL-TLKGITQFYAFVEERQKVHCLNTLFSKLQ 383
++SAT V+ + LR P I + T+ + Q Y F+ + K L + +++
Sbjct: 190 LFSATMTKKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMA 249
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
+ S++F + + LLA + LG I+ M Q R + F++G C L+CTD+
Sbjct: 250 GSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDV 309
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQEL 503
+RG+DI AV++VIN+D P N++ Y+HRVGR+ R G G+A++L+ + +IE+ +
Sbjct: 310 ASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKLI 369
Query: 504 GTEIKQIPPH 513
G ++ + P +
Sbjct: 370 GKKLPEYPAN 379
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 195/371 (52%), Gaps = 18/371 (4%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F DY L+ + + GF +P+PIQ + P+AL G D++ A+ G+GKT A+ +PA+
Sbjct: 102 FPDYVLEE-----VKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 156
Query: 209 I------DHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRL 262
+ D + I V++L PTRELA+Q Q + G +I+ GG + L
Sbjct: 157 VNAQPILDPGDGPI-VLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDL 215
Query: 263 YQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQ 322
+ V +++ TPGR++D+ + L+ + LV+DEAD++L F P I +++ + P+RQ
Sbjct: 216 QKGVEIIIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQ 275
Query: 323 ILMYSATYPVTVKDFKERYLRKPY--VINLMDELTLKGITQFYAFVEERQKVHCLNTLFS 380
L +SAT+P V+ ++L PY +I D I Q+ V E+QK L L
Sbjct: 276 TLYWSATWPKEVEQLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 335
Query: 381 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 439
+ I IF ++ + + +++ G+ IH Q R+ V +F++G +
Sbjct: 336 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 395
Query: 440 CTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED-RF--NL 496
TD+ RG+D++ V VIN+DFP + E Y+HR+GR+GR G G A T + RF L
Sbjct: 396 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKEL 455
Query: 497 YRIEQELGTEI 507
I +E G +
Sbjct: 456 ISILEEAGQRV 466
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 209 bits (531), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 193/376 (51%), Gaps = 28/376 (7%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI---- 209
L +E+L + + G++ PSPIQ SIP+ L D++ A+ G+GKTAAF +P L I
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 314
Query: 210 ----DHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQP 265
+++ V++ PTRELA Q + +++ I+V+ GG S+++ ++ Q
Sbjct: 315 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQG 374
Query: 266 VHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPN----- 320
+++ TPGR++D ++ +L C+ +V+DEAD+++ F+P + ++ + +
Sbjct: 375 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 434
Query: 321 ------------RQILMYSATYPVTVKDFKERYLRKPYVINLMDELTLKG-ITQFYAFVE 367
R M+SAT P V+ +YLR P V+ + I+Q ++
Sbjct: 435 NEDEELDEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 494
Query: 368 ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 427
E +K + L+ L +L +I+F N+ + LAK + GY +H QD R
Sbjct: 495 ESEKNYNLHRLLDQLNDKTAIVFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISL 552
Query: 428 HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNL 487
FR LV TD+ RGIDI V VIN+D P N E Y HR+GR+GR G G+A
Sbjct: 553 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 612
Query: 488 ITYEDRFNLYRIEQEL 503
+T +D Y ++Q L
Sbjct: 613 LTLQDTDVFYELKQML 628
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 209 bits (531), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 193/376 (51%), Gaps = 28/376 (7%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI---- 209
L +E+L + + G++ PSPIQ SIP+ L D++ A+ G+GKTAAF +P L I
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 314
Query: 210 ----DHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQP 265
+++ V++ PTRELA Q + +++ I+V+ GG S+++ ++ Q
Sbjct: 315 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQG 374
Query: 266 VHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPN----- 320
+++ TPGR++D ++ +L C+ +V+DEAD+++ F+P + ++ + +
Sbjct: 375 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 434
Query: 321 ------------RQILMYSATYPVTVKDFKERYLRKPYVINLMDELTLKG-ITQFYAFVE 367
R M+SAT P V+ +YLR P V+ + I+Q ++
Sbjct: 435 NEDEELDEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 494
Query: 368 ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 427
E +K + L+ L +L +I+F N+ + LAK + GY +H QD R
Sbjct: 495 ESEKNYNLHRLLDQLNDKTAIVFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISL 552
Query: 428 HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNL 487
FR LV TD+ RGIDI V VIN+D P N E Y HR+GR+GR G G+A
Sbjct: 553 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 612
Query: 488 ITYEDRFNLYRIEQEL 503
+T +D Y ++Q L
Sbjct: 613 LTLQDTDVFYELKQML 628
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 209 bits (531), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 193/376 (51%), Gaps = 28/376 (7%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI---- 209
L +E+L + + G++ PSPIQ SIP+ L D++ A+ G+GKTAAF +P L I
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 314
Query: 210 ----DHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQP 265
+++ V++ PTRELA Q + +++ I+V+ GG S+++ ++ Q
Sbjct: 315 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQG 374
Query: 266 VHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPN----- 320
+++ TPGR++D ++ +L C+ +V+DEAD+++ F+P + ++ + +
Sbjct: 375 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 434
Query: 321 ------------RQILMYSATYPVTVKDFKERYLRKPYVINLMDELTLKG-ITQFYAFVE 367
R M+SAT P V+ +YLR P V+ + I+Q ++
Sbjct: 435 NEDEELDEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 494
Query: 368 ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 427
E +K + L+ L +L +I+F N+ + LAK + GY +H QD R
Sbjct: 495 ESEKNYNLHRLLDQLNDKTAIVFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISL 552
Query: 428 HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNL 487
FR LV TD+ RGIDI V VIN+D P N E Y HR+GR+GR G G+A
Sbjct: 553 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 612
Query: 488 ITYEDRFNLYRIEQEL 503
+T +D Y ++Q L
Sbjct: 613 LTLQDTDVFYELKQML 628
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 201/377 (53%), Gaps = 13/377 (3%)
Query: 145 KGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 204
+G E + ++++ + +KG K PIQ + A+ G D++ RA+ GTGKT AF IP
Sbjct: 78 EGLEIAKLGISQDIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 137
Query: 205 ALEKIDHDNNVIQ------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDD 258
++KI N ++L PTRELA Q + E +L + GGT +
Sbjct: 138 IMDKIIQFNAKHGRGKDPLALVLAPTRELAKQVEKEFYEAAPNL--DTICVYGGTPISQQ 195
Query: 259 IMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLS 318
+ +L V + VGTPGRI+DL +G LK+ +++DEAD++L FQ +E++++ L
Sbjct: 196 MRQLDYGVDIAVGTPGRIIDLLNRGALNLKEVQFVILDEADQMLQVGFQEDVEKILERLP 255
Query: 319 PNRQILMYSATYPVTVKDFKERYLRKPYVINLM---DELTLKGITQFYAFVEERQKVHCL 375
RQ LM+SAT P +K YL+ P I+L+ D+ GI+ + + K +
Sbjct: 256 AERQTLMFSATMPTWIKQLTRNYLKNPLTIDLVGDSDQKLADGISLYSILSDAYVKAGII 315
Query: 376 NTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGA 434
L + + + I+F + + ++ +++ C +H + Q R R FRNG
Sbjct: 316 VPLIKEHAKGGKCIVFTQTKRDADRISHGMSK-SIPCEALHGDISQIQRERTLAGFRNGH 374
Query: 435 CRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRF 494
LV TD+ +RG+DI V++VI+++ P N+E ++HR GR+GR G G A+ + T +
Sbjct: 375 FNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVYTQDQSR 434
Query: 495 NLYRIEQELGTEIKQIP 511
L IE+++G + ++P
Sbjct: 435 TLRTIERDVGCKFSELP 451
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 193/374 (51%), Gaps = 20/374 (5%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F D L ++ I + +P+ IQ +++PIAL+G D+L A+ G+GKTAAF IP ++
Sbjct: 118 FNDMCLHPSIMKDIAYHDYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQH 177
Query: 209 ------IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLK-IQVMVTTGGTSLKDDIMR 261
I + + +V L PTRELA Q + + + L+ + + GGT+++
Sbjct: 178 CLAQPPIRRGDGPLALV-LAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSE 236
Query: 262 LYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNR 321
L V + V TPGR +D ++G L S +V+DEAD++L F+P I ++++ L
Sbjct: 237 LRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKH 296
Query: 322 QILMYSATYPVTVKDFKERYLRKPYVINLMD-ELTLKGITQFYAFVEERQKVHCLNTLFS 380
Q L++SAT PV ++ + YL P + + ++Q V E +K+ L L
Sbjct: 297 QTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSPTTNVSQTLVKVSENEKIDRLLDLLV 356
Query: 381 KLQINQS----------IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDF 430
+ + +Q+ I+F R + +A+ + G S +H Q R HDF
Sbjct: 357 E-EASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDF 415
Query: 431 RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITY 490
R+ + LV TD+ +RG+D+ V+ VIN D PK E Y+HR+GR+GR G G+A + T
Sbjct: 416 RSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFYTD 475
Query: 491 EDRFNLYRIEQELG 504
D F + I + +
Sbjct: 476 RDMFLVSNIRKAIA 489
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 205/419 (48%), Gaps = 29/419 (6%)
Query: 113 SESADPSSQDWKARLKIPPPDTR--YQTEDVTATKGNEFE-------DYFLKRELLMGIY 163
S S PS + R PP +R D K E D L ++ I
Sbjct: 42 SHSNSPSLFNASRRTSAAPPSSRTIAAVPDTVFPKWQPSERVSRMNPDQCLHPSIMKDIA 101
Query: 164 EKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK------IDHDNNVIQ 217
+ +P+ IQ +++PIAL+G D+L A+ G+GKTAAF IP ++ I + +
Sbjct: 102 YHDYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLA 161
Query: 218 VVILVPTRELALQTSQVCKELGKHLK-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 276
+V L PTRELA Q + + + L+ + + GGT+++ L V + V TPGR
Sbjct: 162 LV-LAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRF 220
Query: 277 LDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKD 336
+D ++G L S +V+DEAD++L F+P I ++++ L Q L++SAT PV ++
Sbjct: 221 IDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEA 280
Query: 337 FKERYLRKPYVINLMD-ELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQS-------- 387
+ YL P + + ++Q V E +K+ L L + + +Q+
Sbjct: 281 LSKEYLASPVQVKVGKVSSPTTNVSQTLVKVSENEKIDRLLDLLVE-EASQAEKCGHPFP 339
Query: 388 --IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 445
I+F R + +A+ + G S +H Q R HDFR+ + LV TD+ +
Sbjct: 340 LTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVAS 399
Query: 446 RGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELG 504
RG+D+ V+ VIN D PK E Y+HR+GR+GR G G+A + T D F + I + +
Sbjct: 400 RGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFYTDRDMFLVSNIRKAIA 458
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 189/349 (54%), Gaps = 10/349 (2%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN 213
L ++L I + FEKP PIQ +++P+ ++G D + AK G+GKT AF +P L I
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 214 NVIQV-----VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
V+ +I+ PTREL Q ++ K + I+ + GG+ + I L + +
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEI 629
Query: 269 LVGTPGRILDL---AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
+V TPGR++D+ + + L+ + LVMDEAD++ F+P I +++Q + P+RQ ++
Sbjct: 630 VVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVL 689
Query: 326 YSATYPVTVKDFKERYLRKPYVINLMDELTL-KGITQFYAFVEERQKVHCLNTLFSKL-Q 383
+SAT+P V+ + L KP I + + K I Q E ++ L L + +
Sbjct: 690 FSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYE 749
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
+ ++F +S ++ + L K + + GY C +H Q R DF++ C LV T +
Sbjct: 750 KGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSI 809
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
RG+D++ + +VINFD P + E Y+HRVGR+GR G G A+ I+ ED
Sbjct: 810 AARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 189/349 (54%), Gaps = 10/349 (2%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN 213
L ++L I + FEKP PIQ +++P+ ++G D + AK G+GKT AF +P L I
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 214 NVIQV-----VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
V+ +I+ PTREL Q ++ K + I+ + GG+ + I L + +
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEI 629
Query: 269 LVGTPGRILDL---AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
+V TPGR++D+ + + L+ + LVMDEAD++ F+P I +++Q + P+RQ ++
Sbjct: 630 VVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVL 689
Query: 326 YSATYPVTVKDFKERYLRKPYVINLMDELTL-KGITQFYAFVEERQKVHCLNTLFSKL-Q 383
+SAT+P V+ + L KP I + + K I Q E ++ L L + +
Sbjct: 690 FSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYE 749
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
+ ++F +S ++ + L K + + GY C +H Q R DF++ C LV T +
Sbjct: 750 KGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSI 809
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
RG+D++ + +VINFD P + E Y+HRVGR+GR G G A+ I+ ED
Sbjct: 810 AARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 189/349 (54%), Gaps = 10/349 (2%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN 213
L ++L I + FEKP PIQ +++P+ ++G D + AK G+GKT AF +P L I
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 214 NVIQV-----VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
V+ +I+ PTREL Q ++ K + I+ + GG+ + I L + +
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEI 629
Query: 269 LVGTPGRILDL---AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
+V TPGR++D+ + + L+ + LVMDEAD++ F+P I +++Q + P+RQ ++
Sbjct: 630 VVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVL 689
Query: 326 YSATYPVTVKDFKERYLRKPYVINLMDELTL-KGITQFYAFVEERQKVHCLNTLFSKL-Q 383
+SAT+P V+ + L KP I + + K I Q E ++ L L + +
Sbjct: 690 FSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYE 749
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
+ ++F +S ++ + L K + + GY C +H Q R DF++ C LV T +
Sbjct: 750 KGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSI 809
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
RG+D++ + +VINFD P + E Y+HRVGR+GR G G A+ I+ ED
Sbjct: 810 AARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 189/349 (54%), Gaps = 10/349 (2%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN 213
L ++L I + FEKP PIQ +++P+ ++G D + AK G+GKT AF +P L I
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 214 NVIQV-----VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
V+ +I+ PTREL Q ++ K + I+ + GG+ + I L + +
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEI 629
Query: 269 LVGTPGRILDL---AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
+V TPGR++D+ + + L+ + LVMDEAD++ F+P I +++Q + P+RQ ++
Sbjct: 630 VVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVL 689
Query: 326 YSATYPVTVKDFKERYLRKPYVINLMDELTL-KGITQFYAFVEERQKVHCLNTLFSKL-Q 383
+SAT+P V+ + L KP I + + K I Q E ++ L L + +
Sbjct: 690 FSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYE 749
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
+ ++F +S ++ + L K + + GY C +H Q R DF++ C LV T +
Sbjct: 750 KGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSI 809
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
RG+D++ + +VINFD P + E Y+HRVGR+GR G G A+ I+ ED
Sbjct: 810 AARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 189/349 (54%), Gaps = 10/349 (2%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN 213
L ++L I + FEKP PIQ +++P+ ++G D + AK G+GKT AF +P L I
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 214 NVIQV-----VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
V+ +I+ PTREL Q ++ K + I+ + GG+ + I L + +
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEI 629
Query: 269 LVGTPGRILDL---AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
+V TPGR++D+ + + L+ + LVMDEAD++ F+P I +++Q + P+RQ ++
Sbjct: 630 VVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVL 689
Query: 326 YSATYPVTVKDFKERYLRKPYVINLMDELTL-KGITQFYAFVEERQKVHCLNTLFSKL-Q 383
+SAT+P V+ + L KP I + + K I Q E ++ L L + +
Sbjct: 690 FSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYE 749
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
+ ++F +S ++ + L K + + GY C +H Q R DF++ C LV T +
Sbjct: 750 KGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSI 809
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
RG+D++ + +VINFD P + E Y+HRVGR+GR G G A+ I+ ED
Sbjct: 810 AARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 189/349 (54%), Gaps = 10/349 (2%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN 213
L ++L I + FEKP PIQ +++P+ ++G D + AK G+GKT AF +P L I
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 214 NVIQV-----VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
V+ +I+ PTREL Q ++ K + I+ + GG+ + I L + +
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEI 629
Query: 269 LVGTPGRILDL---AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
+V TPGR++D+ + + L+ + LVMDEAD++ F+P I +++Q + P+RQ ++
Sbjct: 630 VVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVL 689
Query: 326 YSATYPVTVKDFKERYLRKPYVINLMDELTL-KGITQFYAFVEERQKVHCLNTLFSKL-Q 383
+SAT+P V+ + L KP I + + K I Q E ++ L L + +
Sbjct: 690 FSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYE 749
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
+ ++F +S ++ + L K + + GY C +H Q R DF++ C LV T +
Sbjct: 750 KGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSI 809
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
RG+D++ + +VINFD P + E Y+HRVGR+GR G G A+ I+ ED
Sbjct: 810 AARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 189/349 (54%), Gaps = 10/349 (2%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN 213
L ++L I + FEKP PIQ +++P+ ++G D + AK G+GKT AF +P L I
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 214 NVIQV-----VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
V+ +I+ PTREL Q ++ K + I+ + GG+ + I L + +
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEI 629
Query: 269 LVGTPGRILDL---AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
+V TPGR++D+ + + L+ + LVMDEAD++ F+P I +++Q + P+RQ ++
Sbjct: 630 VVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVL 689
Query: 326 YSATYPVTVKDFKERYLRKPYVINLMDELTL-KGITQFYAFVEERQKVHCLNTLFSKL-Q 383
+SAT+P V+ + L KP I + + K I Q E ++ L L + +
Sbjct: 690 FSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYE 749
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
+ ++F +S ++ + L K + + GY C +H Q R DF++ C LV T +
Sbjct: 750 KGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSI 809
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
RG+D++ + +VINFD P + E Y+HRVGR+GR G G A+ I+ ED
Sbjct: 810 AARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 189/349 (54%), Gaps = 10/349 (2%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN 213
L ++L I + FEKP PIQ +++P+ ++G D + AK G+GKT AF +P L I
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 214 NVIQV-----VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
V+ +I+ PTREL Q ++ K + I+ + GG+ + I L + +
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEI 629
Query: 269 LVGTPGRILDL---AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
+V TPGR++D+ + + L+ + LVMDEAD++ F+P I +++Q + P+RQ ++
Sbjct: 630 VVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVL 689
Query: 326 YSATYPVTVKDFKERYLRKPYVINLMDELTL-KGITQFYAFVEERQKVHCLNTLFSKL-Q 383
+SAT+P V+ + L KP I + + K I Q E ++ L L + +
Sbjct: 690 FSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYE 749
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
+ ++F +S ++ + L K + + GY C +H Q R DF++ C LV T +
Sbjct: 750 KGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSI 809
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
RG+D++ + +VINFD P + E Y+HRVGR+GR G G A+ I+ ED
Sbjct: 810 AARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 189/349 (54%), Gaps = 10/349 (2%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN 213
L ++L I + FEKP PIQ +++P+ ++G D + AK G+GKT AF +P L I
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 214 NVIQV-----VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
V+ +I+ PTREL Q ++ K + I+ + GG+ + I L + +
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEI 629
Query: 269 LVGTPGRILDL---AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
+V TPGR++D+ + + L+ + LVMDEAD++ F+P I +++Q + P+RQ ++
Sbjct: 630 VVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVL 689
Query: 326 YSATYPVTVKDFKERYLRKPYVINLMDELTL-KGITQFYAFVEERQKVHCLNTLFSKL-Q 383
+SAT+P V+ + L KP I + + K I Q E ++ L L + +
Sbjct: 690 FSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYE 749
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
+ ++F +S ++ + L K + + GY C +H Q R DF++ C LV T +
Sbjct: 750 KGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSI 809
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
RG+D++ + +VINFD P + E Y+HRVGR+GR G G A+ I+ ED
Sbjct: 810 AARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 189/349 (54%), Gaps = 10/349 (2%)
Query: 154 LKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDN 213
L ++L I + FEKP PIQ +++P+ ++G D + AK G+GKT AF +P L I
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 214 NVIQV-----VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 268
V+ +I+ PTREL Q ++ K + I+ + GG+ + I L + +
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEI 629
Query: 269 LVGTPGRILDL---AKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
+V TPGR++D+ + + L+ + LVMDEAD++ F+P I +++Q + P+RQ ++
Sbjct: 630 VVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVL 689
Query: 326 YSATYPVTVKDFKERYLRKPYVINLMDELTL-KGITQFYAFVEERQKVHCLNTLFSKL-Q 383
+SAT+P V+ + L KP I + + K I Q E ++ L L + +
Sbjct: 690 FSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYE 749
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
+ ++F +S ++ + L K + + GY C +H Q R DF++ C LV T +
Sbjct: 750 KGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSI 809
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
RG+D++ + +VINFD P + E Y+HRVGR+GR G G A+ I+ ED
Sbjct: 810 AARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:30630772-30640503 | 20130731
Length = 787
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 195/369 (52%), Gaps = 6/369 (1%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FE L R++ GI KG++ P+PIQ +++P+ L+G D++A A+ G+GKTAAF +P L +
Sbjct: 20 FETLGLNRDVFSGIKRKGYKVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLVPMLHR 79
Query: 209 IDHD--NNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 266
++ ++ +IL PTR+LA QT + KELG ++V + GG S++ L Q
Sbjct: 80 LNQHVPQGGVRGLILSPTRDLAQQTLKFTKELGHFTDLRVSLLVGGDSMESQFEELAQNP 139
Query: 267 HLLVGTPGRILD-LAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
+++ TPGR++ L++ L+ +V DEAD L F + Q++ L NRQ L+
Sbjct: 140 DIIIATPGRLMHHLSEVDDMSLRKVEYVVFDEADCLFGMGFAEQLHQILAQLGENRQTLL 199
Query: 326 YSATYPVTVKDFKERYLRKPYVINLMDELTLKGITQFYAF-VEERQKVHCLNTLFSKL-- 382
+SAT P + +F + LR P ++ L E + + F + + +K L L +L
Sbjct: 200 FSATLPSALAEFAKAGLRDPRLVRLDLETKISPDLKLVFFTLRQEEKYAALLYLIRELIG 259
Query: 383 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 442
Q++IF ++ + VE L G + M QD R FR+ L+ TD
Sbjct: 260 SDEQTLIFVSTKHHVEFLNSLFQLEGIRPSVCYGDMDQDARKEHVARFRSRKTMLLIVTD 319
Query: 443 LFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQE 502
+ RGIDI ++ VIN+DFP + ++HRVGR R G G A + +T ED L +
Sbjct: 320 IAARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTAYSFLTAEDMAYLLDLHLF 379
Query: 503 LGTEIKQIP 511
L +K P
Sbjct: 380 LSKPVKAAP 388
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 182/356 (51%), Gaps = 16/356 (4%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL-- 206
FED L +L KGFEKPSPIQ + P L G D++ A G+GKT AF IPA+
Sbjct: 105 FEDSGLPENVLECC--KGFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAIMH 162
Query: 207 ------EKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIM 260
K ++L PTRELA Q S V + GK ++ + GGT I
Sbjct: 163 VMNKRKSKGSSKGRNPLCLMLSPTRELAQQISDVLCDAGKSCGVESVCLYGGTPKGAQIS 222
Query: 261 RLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPN 320
L + +++GTPGRI DL + G+C L++ S +V+DEAD++L F+ + ++
Sbjct: 223 ALKSGIDIVIGTPGRIQDLVEMGICRLQEVSFVVLDEADRMLDMGFEQIVRSILGQTCSA 282
Query: 321 RQILMYSATYPVTVKDFKERYLRK---PYVINLMDELTLKGITQFYAFVEER---QKVHC 374
RQ++M+SAT+P+ V + ++ V+ D + Q ++ER +++
Sbjct: 283 RQMVMFSATWPLAVHHLAQEFMDPNPVKVVVGSEDLSANHDVMQIVEVLDERLRDKRLLA 342
Query: 375 LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGA 434
L + K Q N+ ++F + K + + G+ I Q R + F+NG+
Sbjct: 343 LLEKYHKSQKNRVLVFVLYKWETTRVEKMLQQGGWKAVSISGDKSQHERTKALSLFKNGS 402
Query: 435 CRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITY 490
C ++ TD+ RG+DI V VVINF FP E Y+HR+GR+GR G G+A T+
Sbjct: 403 CPLMIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAGKKGVAHTFFTH 458
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 193/376 (51%), Gaps = 10/376 (2%)
Query: 142 TATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAF 201
T+ + F L R LL G+ KP+PIQ IP+ALTG DI A G+GKTAAF
Sbjct: 146 TSFSADSFLQLNLSRPLLRACEVLGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAF 205
Query: 202 CIPALEKI---DHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDD 258
+P LE++ + I+V+IL PTRELA Q + K L + I+ + GG S K+
Sbjct: 206 ALPTLERLLFRPKRVHAIRVLILTPTRELAAQVQSMIKSLSQFTDIRCCLIVGGLSTKEQ 265
Query: 259 IMRLYQPVHLLVGTPGRILDLAKKGVCI-LKDCSMLVMDEADKLLSPEFQPSIEQLIQFL 317
+ L ++V TPGR++D + + + L D S+L++DEAD+LL F I++L++
Sbjct: 266 EVALRSRPDIVVATPGRMIDHLRNSMSVDLDDLSVLILDEADRLLELGFSAEIQELVRVC 325
Query: 318 SPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDELTLK--GITQFYAFVEERQKVH-- 373
RQ +++SAT V D + L KP ++ D L + +T+ + ++V+
Sbjct: 326 PKKRQTMLFSATMTEEVDDLIKLSLSKPLRLS-ADPLAKRPASLTEEVVRLRRMREVNQE 384
Query: 374 -CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRN 432
L + SK ++ IIF + L G +H + Q R +FR
Sbjct: 385 AVLLAMCSKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQAQRLGALEEFRK 444
Query: 433 GACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
LV TD+ RG+DI V VINF P++ +Y+HRVGR+ R G G AV +T D
Sbjct: 445 QQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVTDND 504
Query: 493 RFNLYRIEQELGTEIK 508
R L I + G+++K
Sbjct: 505 RSLLKAIAKRAGSKLK 520
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 195/368 (52%), Gaps = 18/368 (4%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F DY L I + GF +P+PIQ + P+ALTG D++ A+ G+GKT ++ +PA+
Sbjct: 208 FPDYCLDV-----IAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVH 262
Query: 209 IDHDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 263
+ ++Q V++L PTRELA+Q Q + G I+ GG I L
Sbjct: 263 VSAQPRLVQGEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLR 322
Query: 264 QPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQI 323
V +++ TPGR++D+ + L+ + LV+DEAD++L F+P I +++ + P+RQ
Sbjct: 323 MGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQT 382
Query: 324 LMYSATYPVTVKDFKERYLRKPYVINLMDELTLKG---ITQFYAFVEERQKVHCLNTLFS 380
L +SAT+P V+ ++L PY + ++ LK I Q V + +K + L L
Sbjct: 383 LYWSATWPKEVESLARQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLK 441
Query: 381 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 439
++ I IF + + + +++ G+ IH Q R+ V +F++G +
Sbjct: 442 EVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMT 501
Query: 440 CTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED---RFNL 496
TD+ RG+D++ + V+N+DFP + E Y+HR+GR+GR G G A + T + +L
Sbjct: 502 ATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSFFTSANAKYARDL 561
Query: 497 YRIEQELG 504
+I Q+ G
Sbjct: 562 IKILQDAG 569
>Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:27069344-27076281 | 20130731
Length = 491
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 230/441 (52%), Gaps = 48/441 (10%)
Query: 104 VEEVEKTVQSESADPSSQDWKARLKIPPPDTRYQTEDVTATKGNEFEDYFLKRELLMGIY 163
++E K++ DP + A + DT Y T FE+ L ELL G+Y
Sbjct: 46 IDEENKSLSKSLDDPDDSNITA---VTAGDTPY-------TSATTFEELSLSPELLKGLY 95
Query: 164 -EKGFEKPSPIQEESIPIALT--GSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVI 220
E FEKPS IQ +S+P+ L D++A+A NG+GKT F + L ++D + Q +
Sbjct: 96 VEMKFEKPSKIQAKSLPMILNPPHRDLIAQAHNGSGKTTCFNLGMLSRVDPNLQAPQALC 155
Query: 221 LVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQP---VHLLVGTPGRIL 277
+ PTRELA+Q +V +++GK+ I +D I + + +++GTPG +
Sbjct: 156 ICPTRELAIQNIEVLRKMGKYTGISSECAVP-MDRRDSIPVMKRAPIMAQVVIGTPGTMK 214
Query: 278 DL---AKKGVCILKDCSMLVMDEADKLLSPE-FQPS---IEQLIQFLSPNRQILMYSATY 330
+L K GV LK +LV DEAD++L+ + F+ I + I+ + + Q+L++SAT+
Sbjct: 215 NLITYKKLGVTKLK---ILVFDEADQMLAEDGFRDDSLRIIKEIEKFNSSCQVLLFSATF 271
Query: 331 PVTVKDFKERYLRKPYVINLM---DELTLKGITQFYAFV-EERQKVHCLNTLFSKL--QI 384
TVK+F R + K L +EL+L + Q+ V +E K+ + +L +
Sbjct: 272 NETVKNFATRVVGKKEHNELFVKKEELSLDAVKQYKVLVPDELVKIDVIKNYIFELGENV 331
Query: 385 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 444
Q+IIF + N ++L K + +LGY I + R+++ +F++G + L+ TD+
Sbjct: 332 GQTIIFVRTRNSAKMLHKALVDLGYEVTSIQGALDHVDRDKIVKEFKDGLTQVLISTDVL 391
Query: 445 TRGIDIQAVNVVINFDFP--------------KNAETYLHRVGRSGRYGHLGLAVNLITY 490
RG D Q VN+VIN+D P + E YLHRVGR+GR+G G NLI
Sbjct: 392 ARGFDQQQVNLVINYDLPLKYAAEYTHGHEQEPDYEVYLHRVGRAGRFGRKGAVFNLICG 451
Query: 491 E-DRFNLYRIEQELGTEIKQI 510
E D L +IE+ GT IK++
Sbjct: 452 ERDEKTLSKIEKHFGTYIKEV 472
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 193/389 (49%), Gaps = 23/389 (5%)
Query: 136 YQTEDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGT 195
+ D T+ + F L R LL+ G+ KP+PIQ IP+ALTG DI A G+
Sbjct: 129 FAPSDGTSFSADSFLQLNLSRSLLLACEALGYAKPTPIQAACIPLALTGRDICGSAITGS 188
Query: 196 GKTAAFCIPALEKI---DHDNNVIQVVILVPTRELALQTSQVCKELGKHL-KIQVMVTTG 251
GKTAAF +P LE++ + I+V+IL PTRELA+Q + +EL K I+ + G
Sbjct: 189 GKTAAFALPTLERLLFRPKGVHAIRVLILTPTRELAVQVHSMIEELAKFTDNIRCCLIVG 248
Query: 252 GTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCI-LKDCSMLVMDEADKLLSPEFQPSI 310
G K L ++V TPGR++D + + + L D ++L++DEAD+LL F I
Sbjct: 249 GVPTKGQEAALRSRPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 308
Query: 311 EQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDELTLK---GITQFYAFVE 367
++L++ RQ +++SAT V D + L KP + L + + K +T+ +
Sbjct: 309 QELVRVCPKKRQTMLFSATMTEEVDDLIKLSLSKP--VRLSADPSAKRPASLTEEVVRIR 366
Query: 368 ERQKVH--------CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKML 419
++V+ C T SK+ IIF + L G +H +
Sbjct: 367 RMREVNHEAVLLAMCTKTFTSKV-----IIFSGTKQAAHRLRIIFGLSGLKAAELHGNLT 421
Query: 420 QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYG 479
Q R FR LV TD+ RG+DI V VINF P++ +Y+HRVGR+ R G
Sbjct: 422 QAQRLDALEQFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAG 481
Query: 480 HLGLAVNLITYEDRFNLYRIEQELGTEIK 508
G AV +T DR L I + G+++K
Sbjct: 482 RAGSAVTFVTDSDRSLLKAIAKRAGSKLK 510
>Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:17617607-17621556 | 20130731
Length = 450
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 216/394 (54%), Gaps = 40/394 (10%)
Query: 144 TKGNEFEDYFLKRELLMGIY-EKGFEKPSPIQEESIPIALTG--SDILARAKNGTGKTAA 200
T FE+ L ELL G+Y E GF KPS IQE ++P+ L D++A+A+NG+GKT
Sbjct: 51 TSAATFEELSLSPELLKGLYVEMGFIKPSKIQEITLPMILNPPHKDLIAQARNGSGKTTC 110
Query: 201 FCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIM 260
F + L ++D + Q + + PTRELA+Q ++V +++GK+ I + D I
Sbjct: 111 FVLGMLSRVDPNMKAPQALCICPTRELAIQNNEVLQKMGKYTGISSELAIPSM---DKIP 167
Query: 261 RLYQP---VHLLVGTPGRILDLA---KKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLI 314
+P +++GTPG I L K GV LK +LV DEAD++L+ + + + L+
Sbjct: 168 PSRRPPIMAQVVIGTPGTINSLKNHKKLGVTRLK---ILVFDEADQMLA-QMMVTKDWLV 223
Query: 315 QFLSPNRQILMYSATYPVTVKDFKERYLRKP----YVINLMDELTLKGITQF-YAFVEER 369
FL Q+L++SAT+ TVK+F R + K Y + +EL+L+ + Q+ +E
Sbjct: 224 -FL----QVLLFSATFDDTVKNFATRIVAKKEHNEYFVK-KEELSLEAVKQYKVKCTDEL 277
Query: 370 QKVHCLNTLFSKL--QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 427
K+ + +L + Q+IIF + N ++L K + + GY I + + R+ +
Sbjct: 278 AKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKSLVDFGYEVTSIQGALQTEERDTII 337
Query: 428 HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP----------KNAETYLHRVGRSGR 477
+F++G + L+ TD+ +RG D VN+VIN+D P + E YLHRVGR+GR
Sbjct: 338 KEFKDGLTQVLISTDVLSRGFDQDQVNLVINYDLPLKYTRGQEPEPDCEVYLHRVGRAGR 397
Query: 478 YGHLGLAVNLITYE-DRFNLYRIEQELGTEIKQI 510
+G G NLI +E ++ + +IE+ G ++++
Sbjct: 398 FGRKGAVFNLICHESEQMVMSKIEEHFGIHVEEV 431
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 190/357 (53%), Gaps = 12/357 (3%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FED +++ I ++G+EKP+ IQ +++P+ L+G DI+ AK G+GKTAAF +P +
Sbjct: 233 FEDCGFAPQIMGAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 292
Query: 209 IDHDNNVIQV------VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRL 262
I D +Q VI PTRELA Q K+ K I+V GG S + L
Sbjct: 293 I-MDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFAKAYGIRVSAVYGGMSKLEQFKEL 351
Query: 263 YQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQ 322
++V TPGR++D+ K + + LV+DEAD++ F+P + ++ + P+RQ
Sbjct: 352 KAGCEIVVATPGRLIDMLKMKALAMLRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQ 411
Query: 323 ILMYSATYPVTVKDFKERYLRKPYVINLMD-ELTLKGITQFYAFV-EERQKV-HCLNTLF 379
L++SAT P V+ L P + + + + + ITQ + + +K+ L L
Sbjct: 412 TLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQVIPSDSEKLPWLLEKLH 471
Query: 380 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 439
+ +++F + V+ + ++ + G+ +H Q R + F++GA L+
Sbjct: 472 EMIDQGDTLVFASKKATVDEIEVQLGQRGFKVAALHGDKDQSSRMDILQKFKSGAYHVLI 531
Query: 440 CTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHL-GLAVNLITY-EDRF 494
TD+ RG+DI+++ V+NFD K+ + ++HR+GR+GR G G+A LIT E RF
Sbjct: 532 ATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARF 588
>Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:27664451-27658107 | 20130731
Length = 513
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 188/364 (51%), Gaps = 17/364 (4%)
Query: 139 EDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKT 198
E+ TAT F D L + E G + P +Q+ IP L G ++ + G+GKT
Sbjct: 48 ENTTAT----FSDLGLSEWAVKTCKELGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKT 103
Query: 199 AAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDD 258
AAF +P L+++ + +++ PTRELA Q ++ + LG L++++ V GG +
Sbjct: 104 AAFALPILQRLAEHTFGVFALVVTPTRELAFQLAEQFRALGSSLRLRIAVVVGGMDMLRQ 163
Query: 259 IMRLYQPVHLLVGTPGRILDLAKKG---VCILKDCSMLVMDEADKLLSPEFQPSIEQLIQ 315
L HL++ TPGRI L K + LV+DEAD++L FQ ++ + Q
Sbjct: 164 TKELVARPHLVIATPGRIKVLLKDNPEIAPVFARTKFLVLDEADRVLDVGFQDELKFIFQ 223
Query: 316 FLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDEL-TLKGITQFYAFVEERQKVHC 374
L NRQ L +SAT ++ +ERY K Y + T++ + Q F+ + K
Sbjct: 224 CLPENRQNLFFSATTTSNLQKLRERYQDKLYAFEAYEGFKTVENLKQQVVFIPKNVKDVY 283
Query: 375 LNTLFSKLQ---INQSIIF---CNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFH 428
L + SK++ I +I+F C +R+ L+ + + + + + + Q R H
Sbjct: 284 LLHILSKMEDMGIRSAIVFVSTCRDCHRLNLMLEVLDQEAAALYSFRS---QAQRLEALH 340
Query: 429 DFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLI 488
DF++G L+ TD+ RG+DI V++VIN+D P+ Y+HRVGR+ R G GLA++L+
Sbjct: 341 DFKSGKVPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLV 400
Query: 489 TYED 492
T D
Sbjct: 401 TQND 404
>Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:23956977-23948909 | 20130731
Length = 557
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/339 (33%), Positives = 176/339 (51%), Gaps = 10/339 (2%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F L I F + IQ +SIP L G D+L A+ G+GKT AF IPA+E
Sbjct: 92 FSSLGLSERTSQAIAAMSFTHMTQIQAKSIPPLLMGKDVLGAARTGSGKTLAFLIPAVEL 151
Query: 209 IDH----DNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVM-VTTGGTSLKDDIMRLY 263
+ + N V+++ PTRELA+QT V EL K Q + GG K + R+
Sbjct: 152 LYNVQFTPRNGTGVIVICPTRELAIQTHAVASELMKGYHSQTLGKVIGGVGRKGEAERIV 211
Query: 264 QPVHLLVGTPGRILD-LAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQ 322
+ V+LL+ TPGR+LD L I K+ L++DEAD++L F+ ++Q++ L RQ
Sbjct: 212 KGVNLLIATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILESNFEEEMKQILNILPKKRQ 271
Query: 323 ILMYSATYPVTVKDFKERYLRKPYVINLMD----ELTLKGITQFYAFVEERQKVHCLNTL 378
++SAT V+D + P V +D ++T++G+ Q Y V ++ L +
Sbjct: 272 TALFSATQTKKVEDLARLSFQTPPVYVDVDIGREKVTVEGLEQGYVVVPCAKRFVVLYSF 331
Query: 379 FSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL 438
+ Q + ++F +S N V+ A + +G C IH K Q+ R F +F L
Sbjct: 332 LKRYQSKKVMVFFSSCNSVKFHADLLKFIGLDCLNIHGKQKQNSRTSTFFNFCKAEKGIL 391
Query: 439 VCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
+CTD+ RG+DI AV+ ++ FD P + Y+HRVGR+ R
Sbjct: 392 LCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTAR 430
>Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6241938-6240697 | 20130731
Length = 325
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 183/338 (54%), Gaps = 27/338 (7%)
Query: 178 IPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKE 237
IP G D++ + +GTG +A FCI L+ +D++ Q ++L PT ELALQ QV ++
Sbjct: 3 IPPFCKGHDVILQDPSGTGMSATFCIGILKMLDYELAHCQALVLAPTNELALQIKQVMQD 62
Query: 238 LGKHLKIQVMVTTGGTSLK-DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMD 296
LG+ +++ GG S +D+ R Q LLV VMD
Sbjct: 63 LGQFHGVRIHACVGGISAPVEDLQRFMQVFTLLV-----------------------VMD 99
Query: 297 EADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLM-DELT 355
E D++LS +F+ I+++ Q L Q+ + S+T P + ++++KP I DELT
Sbjct: 100 EVDEMLSCDFEEKIDKIFQLLPYKIQVGVISSTMPPEALEITRKFMKKPVTIQAKRDELT 159
Query: 356 -LKGITQFYAFV-EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFY 413
L+GI QFY V EE+ K+ L +++ I I+F N+ +V+ L K+ Y+
Sbjct: 160 TLEGIKQFYVNVDEEKWKLETLYDIYTTKFITHCIVFVNTERKVDWLMDKMRSRYYTVLT 219
Query: 414 IHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVG 473
IH M Q+ R+ + +F++G+ + L+ TD G+D+Q V++VIN+D P E YLHR+
Sbjct: 220 IHDDMDQNTRDIIVRNFQSGSPQILITTDPLVYGLDVQEVSLVINYDLPTLPENYLHRIC 279
Query: 474 RSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIP 511
GR+G G+A+N +T +D L I++ I+++P
Sbjct: 280 HKGRFGRKGVAINFVTLDDFRMLSDIQKLSNVIIEELP 317
>Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10113462-10118856 | 20130731
Length = 569
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 189/363 (52%), Gaps = 29/363 (7%)
Query: 159 LMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI--------D 210
L G+ + G+EK + +QE ++P+ L G D+LA+AK GTGKT AF +P++E +
Sbjct: 113 LKGVKDAGYEKMTIVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPNNRG 172
Query: 211 HDNNVIQVVILVPTRELALQTS-QVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ-PVHL 268
+ I V+++ PTRELA Q + + K L H I V GGTSL + R+ + P +
Sbjct: 173 QNQTPILVLVVCPTRELACQAAAEATKLLKYHPTIGAQVVIGGTSLSSEQKRIQKNPCQI 232
Query: 269 LVGTPGRILD-LAKKG--VCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
L+ TPGR+ D +A L LV+DEAD+LL F+ IE++I + RQ LM
Sbjct: 233 LIATPGRLKDHIANTAGFASKLMGVKALVLDEADQLLDMGFRKDIEKIIASVPKQRQTLM 292
Query: 326 YSATYPVTVKDFKERYLRKPY-VINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 384
+SAT P V L+K + IN + E G + ++ V + + L+ FS L +
Sbjct: 293 FSATIPDAVHQVCNVALKKDFEFINTVQE----GTEETHSQVRQMHLIAPLDKHFSLLSV 348
Query: 385 -----------NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 433
+ ++FC + L+A + +L + IH++ Q +R RV +FR
Sbjct: 349 ILKEHIADDVDYKVLVFCTTAMVTSLVANLLGKLNLNVREIHSRKNQSYRTRVSDEFRKS 408
Query: 434 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDR 493
LV +D+ RG+D V++V+ P + + Y+HR+GR+GR G G + L+ +
Sbjct: 409 KRLILVTSDVSARGVDYPDVSLVVQVGLPADKQQYIHRLGRTGRKGKEGKGILLLAPWEE 468
Query: 494 FNL 496
F L
Sbjct: 469 FFL 471
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 187/363 (51%), Gaps = 29/363 (7%)
Query: 159 LMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI--------D 210
L G+ + G+EK + +QE ++P+ L G D+LA+AK GTGKT AF +P++E +
Sbjct: 117 LKGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPSDPG 176
Query: 211 HDNNVIQVVILVPTRELALQTS-QVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ-PVHL 268
I V+++ PTRELA Q + + K L H I V GGT + + R+ + P +
Sbjct: 177 QSQTPILVLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTKIVSEQKRIQKNPCQI 236
Query: 269 LVGTPGRILD-LAKKG--VCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
LV TPGR+ D +AK L V+DEAD+LL F+ IE++I + RQ LM
Sbjct: 237 LVATPGRLKDHIAKTAGFASNLMGLKTFVIDEADRLLDMGFRKDIEEIITSVPKQRQTLM 296
Query: 326 YSATYPVTVKDFKERYLRKPY-VINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 384
+SAT P V L+K Y IN + E G + ++ V + + L+ FS L +
Sbjct: 297 FSATIPKAVHQVCNVALKKDYEFINTVQE----GTEETHSQVRQMHLIAPLDKHFSLLSV 352
Query: 385 -----------NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 433
+ ++FC + L+A + +L + I+++ Q RNRV +FR
Sbjct: 353 ILKEHIADEVDYKVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKKQGFRNRVSDEFRKS 412
Query: 434 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDR 493
LV +D+ RG+D V++V+ P + E Y+HR+GR+GR G G + L+ +
Sbjct: 413 KRLILVTSDVSARGVDYPDVSLVVQLGIPADKELYIHRLGRTGRIGKEGKGILLLAPWEE 472
Query: 494 FNL 496
F L
Sbjct: 473 FFL 475
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 188/373 (50%), Gaps = 29/373 (7%)
Query: 147 NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
N F + L +L I + KP+P+Q +IPIA+ G D++A A+ G+GKTAAFC P +
Sbjct: 139 NLFAETELHEDLKNNIERCKYVKPTPVQRYAIPIAVAGRDLMACAQTGSGKTAAFCFPII 198
Query: 207 EKI----------------DHDNNVIQVVILVPTRELALQT-SQVCKELGKHLKIQVMVT 249
I D D +IL PTREL+ Q ++ CK +++ V
Sbjct: 199 SGIMKERLASGLLPRGGGVDSDVAFPTALILSPTRELSCQIHAEACK-FAHQTGVKIAVV 257
Query: 250 TGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPS 309
GG + + L + V +LV TPGR++DL ++ LK L +DEAD++L F+
Sbjct: 258 YGGAPIGQQLRILERGVDILVATPGRLVDLIERERVSLKKIKYLALDEADRMLDMGFEHQ 317
Query: 310 IEQLIQ--FLSP--NRQILMYSATYPVTVKDFKERYLRKPYVINLMDEL--TLKGITQFY 363
I ++Q + P +RQ L++SAT+P ++ +L YV + + + + I Q
Sbjct: 318 IRNIVQQMHMPPPGDRQTLLFSATFPDNIQKLASDFLSN-YVFLAVGRVGSSTELIVQKI 376
Query: 364 AFVEERQKVHCLNTLFSKLQINQ----SIIFCNSVNRVELLAKKITELGYSCFYIHAKML 419
V++ +K L L + +N +++F + + L + + + IH +
Sbjct: 377 ESVQDMEKRTRLVDLLRRNVVNGKLALTLVFVETKKGADALENWLCRINFPAIAIHGDKV 436
Query: 420 QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYG 479
Q R R F+ G +V TD+ +RG+DI V VINFD P++ + Y+HR+GR+GR G
Sbjct: 437 QMERERALRSFKRGLTPIMVATDVASRGLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAG 496
Query: 480 HLGLAVNLITYED 492
GLA + ++
Sbjct: 497 QSGLATAFFSTKN 509
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 178/359 (49%), Gaps = 18/359 (5%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F L +LL I G+E P+P+Q ++IP AL G ++L A G+GK+A+F IP + +
Sbjct: 141 FASCNLPDKLLQNIEAAGYEMPTPVQMQAIPAALVGKNMLVLADTGSGKSASFLIPIISR 200
Query: 209 IDH-------DNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMR 261
DN ++L PTREL++Q + K LGK L + + GG ++ + R
Sbjct: 201 CASHRLMYVSDNKKPLAMVLTPTRELSIQVEEHAKLLGKGLPFKTALVVGGDAMARQLYR 260
Query: 262 LYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNR 321
+ Q V L+VGTPGR++DL K L D + V+DE D +L F+ + Q+ LS
Sbjct: 261 IQQGVELIVGTPGRLVDLLTKNEIDLDDVTTFVVDEVDCMLQRGFRDQVLQIFTALS-QP 319
Query: 322 QILMYSATYPVTVKDFKERYLRKPYVINLMD-ELTLKGITQFYAFVEERQKVHCLNTLFS 380
Q+LMYSAT +++ + VI + + K + Q +VE +QK LF
Sbjct: 320 QVLMYSATTSDSLEKMANSMAKDTVVITVGEPNRPNKAVKQLAIWVESKQKKQ---KLFD 376
Query: 381 KLQINQS-----IIFCNSVNRVELLAKKIT-ELGYSCFYIHAKMLQDHRNRVFHDFRNGA 434
L+ + +I+ S +LLA IT G IH + R + F G
Sbjct: 377 ILKSQKHFKPPVVIYVGSRLGADLLANAITVSTGVKAVSIHGEKSMTERREIMQSFMVGE 436
Query: 435 CRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDR 493
+V T + RG+D+ V VI FD P + Y+H++GR+ R G G A+ + E++
Sbjct: 437 FPVVVATGVLGRGVDLLGVRQVIVFDMPNSINEYVHQIGRASRMGEEGQAIVFVNDENK 495
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 189/390 (48%), Gaps = 26/390 (6%)
Query: 147 NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
N F + L L I + KP+P+Q +IPI+L G D++A A+ G+GKTAAFC P +
Sbjct: 144 NTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPII 203
Query: 207 EKIDHDNNVIQ-----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSL 255
I + ++L PTREL++Q + ++ ++V+V GG +
Sbjct: 204 SGIMTGQPAQRPPRGVRTVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPI 263
Query: 256 KDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQ 315
+ L + V +LV TPGR++DL ++ L L +DEAD++L F+P I ++++
Sbjct: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVE 323
Query: 316 FL----SPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDEL--TLKGITQFYAFVEER 369
+ + RQ +++SAT+P ++ +L Y+ + + + I Q +V+E
Sbjct: 324 QMDMPPAGVRQTMLFSATFPKEIQRLASDFLSN-YIFLAVGRVGSSTDLIDQRVEYVQES 382
Query: 370 QKVHCLNTLFSKLQINQ-------SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDH 422
K L L + N +++F + + L + + IH Q
Sbjct: 383 DKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQE 442
Query: 423 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLG 482
R F++G LV TD+ RG+DI V V+NFD P + + Y+HR+GR+GR G G
Sbjct: 443 REAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKG 502
Query: 483 LAVNLITYEDRFNLYRIEQELGTEIKQIPP 512
LA E+ ++ R Q+L E Q P
Sbjct: 503 LATAFFN-ENNTSMARSLQDLMQEANQEVP 531
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 189/390 (48%), Gaps = 26/390 (6%)
Query: 147 NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
N F + L L I + KP+P+Q +IPI+L G D++A A+ G+GKTAAFC P +
Sbjct: 144 NTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPII 203
Query: 207 EKIDHDNNVIQ-----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSL 255
I + ++L PTREL++Q + ++ ++V+V GG +
Sbjct: 204 SGIMTGQPAQRPPRGVRTVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPI 263
Query: 256 KDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQ 315
+ L + V +LV TPGR++DL ++ L L +DEAD++L F+P I ++++
Sbjct: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVE 323
Query: 316 FL----SPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDEL--TLKGITQFYAFVEER 369
+ + RQ +++SAT+P ++ +L Y+ + + + I Q +V+E
Sbjct: 324 QMDMPPAGVRQTMLFSATFPKEIQRLASDFLSN-YIFLAVGRVGSSTDLIDQRVEYVQES 382
Query: 370 QKVHCLNTLFSKLQINQ-------SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDH 422
K L L + N +++F + + L + + IH Q
Sbjct: 383 DKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQE 442
Query: 423 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLG 482
R F++G LV TD+ RG+DI V V+NFD P + + Y+HR+GR+GR G G
Sbjct: 443 REAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKG 502
Query: 483 LAVNLITYEDRFNLYRIEQELGTEIKQIPP 512
LA E+ ++ R Q+L E Q P
Sbjct: 503 LATAFFN-ENNTSMARSLQDLMQEANQEVP 531
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 185/362 (51%), Gaps = 24/362 (6%)
Query: 147 NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
N F + L L I + KP+P+Q +IPI+L G D++A A+ G+GKTAAFC P +
Sbjct: 153 NTFAEIDLGDALNQNIKRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 212
Query: 207 EKIDHDNNVIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 256
I + + +IL PTREL+ Q K+ ++V+V GG +
Sbjct: 213 SGILTEQYAQRPRVARTAYPLALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPIT 272
Query: 257 DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQF 316
+ L + V +LV TPGR++DL ++ L+ L +DEAD++L F+P I ++++
Sbjct: 273 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQ 332
Query: 317 LS---PN-RQILMYSATYPVTVKDFKERYLRKPYVINLMDEL--TLKGITQFYAFV-EER 369
+ P RQ L++SAT+P ++ +L Y+ + + + I Q +V E
Sbjct: 333 MDMPPPGMRQTLLFSATFPKEIQRLASDFLAS-YIFLAVGRVGSSTDLIAQRVEYVLESD 391
Query: 370 QKVHCLNTLFSKLQ--INQ----SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 423
++ H ++ L ++ + +N +++F + + L + G+ IH Q R
Sbjct: 392 KRSHLMDLLHAQRENDVNGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQER 451
Query: 424 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGL 483
+ F+ G LV TD+ RG+DI V V+NFD P + + Y+HR+GR+GR G +GL
Sbjct: 452 EQALRSFKTGNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGL 511
Query: 484 AV 485
A
Sbjct: 512 AT 513
>Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46109502-46117199 | 20130731
Length = 583
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 180/328 (54%), Gaps = 11/328 (3%)
Query: 161 GIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID----HDNNVI 216
I + GF+ + IQ +IP L+G D+L A+ G+GKT AF IPA+E + + +
Sbjct: 110 AIVDMGFQHLTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPAVELLHKLKFNQRSGT 169
Query: 217 QVVILVPTRELALQTSQVCKELGKHLKIQ--VMVTTGGTSLKDDIMRLYQPVHLLVGTPG 274
VVI+ PTRELA+QT +V ++L KH + + + GG++ + + L + ++++V TPG
Sbjct: 170 GVVIICPTRELAIQTHEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLAKGINIVVATPG 229
Query: 275 RILD-LAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVT 333
R+LD L I + L++DEAD++L F+ ++Q+I+ L NRQ ++SAT
Sbjct: 230 RLLDHLQNTKRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNRQTALFSATQTKK 289
Query: 334 VKDFKE-RYLRKPYVINLMD---ELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSII 389
V+D + P I++ D ++T +G+ Q Y V ++ L + + + + ++
Sbjct: 290 VEDLARLSFQTTPIYIDVDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLKRHKSKKVMV 349
Query: 390 FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 449
F +S N V+ A + C I+ K Q R F DF L+CTD+ RG+D
Sbjct: 350 FFSSCNSVKFHADIFNHIHLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCTDVAARGLD 409
Query: 450 IQAVNVVINFDFPKNAETYLHRVGRSGR 477
I +V+ ++ +D P + Y+HRVGR+ R
Sbjct: 410 IPSVDWILQYDPPDEPKEYIHRVGRTAR 437
>Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10111776-10105760 | 20130731
Length = 668
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 183/363 (50%), Gaps = 29/363 (7%)
Query: 159 LMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI--------D 210
L GI + G+EK + +QE ++P+ L G D+LA+AK GTGKT AF +P++E + D
Sbjct: 212 LKGIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPSDRD 271
Query: 211 HDNNVIQVVILVPTRELALQTS-QVCKELGKHLKIQVMVTTGGTSLKDDIMRL-YQPVHL 268
I V+++ PTRELA Q + + K L H I V V GGT L + R+ P +
Sbjct: 272 QRRPPIFVLVICPTRELACQAAAEATKLLKYHPTIGVQVVIGGTRLALEQKRMQANPCQI 331
Query: 269 LVGTPGRILDLAKKGVCI---LKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
LV TPGR+ D + L LV+DEAD LL F+ IE++I + RQ LM
Sbjct: 332 LVATPGRLRDHIENTAGFASRLMGVKSLVLDEADHLLDMGFRKDIEKIIAAIPKQRQTLM 391
Query: 326 YSATYPVTVKDFKERYLRKPY-VINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 384
+SAT P V+ L++ + IN + E G ++ V + V L+ F L
Sbjct: 392 FSATIPDEVRQVCHVALKRDFEYINTVQE----GSEDTHSQVRQMHLVAPLDKHFPLLYA 447
Query: 385 -----------NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 433
+ ++FC + L+A + EL + IH++ Q +R RV +FR
Sbjct: 448 ILKEHIADDVDYKVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQSYRTRVSDEFRKS 507
Query: 434 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDR 493
LV +D+ RG+D V +V+ P + + Y+HR+GR+GR G G + L+ +
Sbjct: 508 KGLILVTSDVSARGVDYPDVTLVVQVGLPADKQQYIHRLGRTGRKGKEGQGILLLAPWEE 567
Query: 494 FNL 496
F L
Sbjct: 568 FFL 570
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 188/380 (49%), Gaps = 17/380 (4%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F+D +L + KG +P+PIQ + +P+ L+G D++ A G+GKT F +P +
Sbjct: 146 FKDMRFPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMM 205
Query: 209 IDHDNNVIQVV--------ILVPTRELALQTSQVCKELGKHLK------IQVMVTTGGTS 254
+ ++ +V I+ P+RELA QT +V +E LK ++ ++ GG
Sbjct: 206 AMQEEIMMPIVPGEGPFGLIICPSRELARQTYEVIEEFLLPLKEAGYPELRPLLCIGGID 265
Query: 255 LKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLI 314
++ + + + VH++V TPGR+ D+ K L +C L +DEAD+L+ F+ I ++
Sbjct: 266 MRSQLEIVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVF 325
Query: 315 QFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDELTLK-GITQFYAFVEERQKVH 373
RQ L++SAT P +++F L KP ++N+ + Q +V++ K+
Sbjct: 326 DHFKAQRQTLLFSATMPTKIQNFARSALVKPIIVNVGRAGAANLDVIQEVEYVKQEAKIV 385
Query: 374 CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 433
L K +IFC + V+ + + + G IH Q+ R F+ G
Sbjct: 386 YLLECLQKTP-PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKAG 444
Query: 434 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITY-ED 492
LV TD+ ++G+D + VIN+D P E Y+HR+GR+GR G G+A I +
Sbjct: 445 KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQS 504
Query: 493 RFNLYRIEQELGTEIKQIPP 512
L ++ L ++IPP
Sbjct: 505 ETTLLDLKHLLQEAKQRIPP 524
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 194/396 (48%), Gaps = 18/396 (4%)
Query: 139 EDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKT 198
ED+ N F+D +L + KG +P+PIQ + +P+ L+G D++ A G+GKT
Sbjct: 139 EDIPPPIKN-FKDMRFPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKT 197
Query: 199 AAFCIPALEKIDHDNNVIQVV--------ILVPTRELALQTSQVCKELGKHLK------I 244
F +P + + + +V I+ P+ ELA QT +V ++ LK +
Sbjct: 198 LVFVLPMIMMAMQEEIRMPIVPGEGPFGLIICPSWELARQTYEVIEQFLLPLKEAGYPEL 257
Query: 245 QVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSP 304
+ ++ GG ++ + + + VH++V TPGR+ D+ K L +C L +DEAD+L+ P
Sbjct: 258 RPLLCIGGIDMRSQLKIVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDP 317
Query: 305 EFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDELTLK-GITQFY 363
F+ I ++ RQ L++SAT P +++F L KP ++N+ + Q
Sbjct: 318 GFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPIIVNVGRAGAANLDVIQEV 377
Query: 364 AFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 423
+V++ K+ L K +IFC + V+ + + + G IH Q+ R
Sbjct: 378 EYVKQEAKIVYLLECLQKTP-PPVLIFCENKADVDNIHEYLLLKGVEAVAIHGDKDQEDR 436
Query: 424 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGL 483
F+ G LV TD+ ++G+D + VIN+D P E Y+HR+GR+GR G G+
Sbjct: 437 EYAISSFKTGKKDVLVATDIASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGI 496
Query: 484 AVNLITY-EDRFNLYRIEQELGTEIKQIPPHIDQAI 518
A I + L ++ L ++IPP + + I
Sbjct: 497 ATTFINKNQTETTLLDLKHLLQEAKQRIPPVLAELI 532
>Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:17543999-17545772 | 20130731
Length = 398
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 201/394 (51%), Gaps = 39/394 (9%)
Query: 163 YEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILV 222
+ +GF +PS IQ+ I G ++ + GTG FCI L+K+D+ Q ++L
Sbjct: 6 HSQGFGRPSSIQQRVIAPFCEGLGVILQDPYGTGMLETFCIGILKKLDYGLVHCQALVLA 65
Query: 223 PTRELALQTSQVCKELGKHLKIQVMVTTGGTSL-KDDIMRLYQ----------------- 264
PT EL LQ +V ++LG+ +++ GGTS+ K+D R +
Sbjct: 66 PTMELVLQIKEVMQDLGRFHGVKIHACVGGTSVPKEDRQRFLKVGYNSYIVEGTSNVYDI 125
Query: 265 -----------PVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQL 313
VH++VGTP + D+ ++G L M VMDE D++LS F+ I+++
Sbjct: 126 IDMDGQFIFKGGVHIIVGTPRCVYDMLQRGRTRLDCIKMFVMDEVDQMLSLGFKDKIDEI 185
Query: 314 IQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLM-DELTLKGITQFYAFVE-ERQK 371
+ L Q+ + SAT P + ++++KP I DELTL+GI QFY VE E K
Sbjct: 186 FKLLPCKIQVGVISATMPPEALEITRKFMKKPVTIQAKPDELTLEGIKQFYVDVEKEEWK 245
Query: 372 VHCLNTLFS----KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 427
+ L +F I I+F ++ +V+ L K+ + I + M Q+ R+ +
Sbjct: 246 LETLCDIFELTVKAKSITHCIVFVDTRCKVDWLTDKMQSRDHKVSVIQSDMDQNTRDIIV 305
Query: 428 HDF--RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVG-RSGRYGHLGLA 484
+F ++G+ L+ TD G D+ V++++N+D P E YL+R+G RSG++G +A
Sbjct: 306 REFFSQSGSPHVLITTDPLVCGTDVHKVSLIVNYDLPAAPENYLYRIGRRSGQFGRC-VA 364
Query: 485 VNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 518
+N +T ++ + I++ I+++P + D+ +
Sbjct: 365 INFMTKDEATMIIDIQKFYNMVIEELPYNFDELL 398
>Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:40729630-40725252 | 20130731
Length = 756
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 182/367 (49%), Gaps = 29/367 (7%)
Query: 166 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE--------KIDHDNNVIQ 217
G+ + +QE S+PI L G+D++ +AK GTGKTAAF +PA+E K H I
Sbjct: 306 GYTHMTRVQETSLPICLEGNDVMVKAKTGTGKTAAFLLPAIETVLKAMSSKTSHRAPPIY 365
Query: 218 VVILVPTRELALQTSQVCKELGK-HLKIQVMVTTGGTSLKDDIMRL-YQPVHLLVGTPGR 275
V+IL PTRELA Q + K L K H + V GG K D RL P +LV TPGR
Sbjct: 366 VLILCPTRELASQIAAEAKVLLKYHDGVGVQTLVGGVRFKVDQKRLESDPCQMLVATPGR 425
Query: 276 ILDLA--KKGVCI-LKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPV 332
+LD K G+ + + ML++DEAD LL F+ IE+++ L RQ L++SAT P
Sbjct: 426 LLDHIENKTGISVRVMGLQMLILDEADHLLDLGFRKDIEKIVDCLPRQRQSLLFSATIPK 485
Query: 333 TVKDFKERYLRKPY----VINLMDELTLKGITQFYAFVEERQKV----HCLNTLFSKLQI 384
V+ + L++ + + + T + Q Y H L S+
Sbjct: 486 EVRRVSQLVLKREHKYVDTVGMGCVETPVQVKQSYLIAPHESHFQIVHHILKEHISQTPD 545
Query: 385 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 444
+ I+FC + L + ++ + IH++ Q +R RV +F+ LV +D+
Sbjct: 546 YKVIVFCITGMVTSLTYHLLRDMKLNVREIHSRKPQLYRTRVSDEFKESKQMILVSSDVT 605
Query: 445 TRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELG 504
+RG++ V +VI P + E Y+HR+GR+GR G G + LI + + L
Sbjct: 606 SRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKEGKGILLIAPWEEYFL-------- 657
Query: 505 TEIKQIP 511
EIK +P
Sbjct: 658 NEIKDLP 664
>Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857813-27867050 | 20130731
Length = 456
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 170/333 (51%), Gaps = 20/333 (6%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE- 207
F D L ++ I + +P+ IQ +++PIAL+G D+L A+ G+GKTAAF IP ++
Sbjct: 118 FNDMCLHPSIMKDIAYHDYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQH 177
Query: 208 -----KIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLK-IQVMVTTGGTSLKDDIMR 261
I + + +V L PTRELA Q + + + L+ + + GGT+++
Sbjct: 178 CLAQPPIRRGDGPLALV-LAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSE 236
Query: 262 LYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNR 321
L V + V TPGR +D ++G L S +V+DEAD++L F+P I ++++ L
Sbjct: 237 LRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKH 296
Query: 322 QILMYSATYPVTVKDFKERYLRKPYVINLMD-ELTLKGITQFYAFVEERQKVHCLNTLFS 380
Q L++SAT PV ++ + YL P + + ++Q V E +K+ L L
Sbjct: 297 QTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSPTTNVSQTLVKVSENEKIDRLLDLLV 356
Query: 381 KLQINQS----------IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDF 430
+ + +Q+ I+F R + +A+ + G S +H Q R HDF
Sbjct: 357 E-EASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDF 415
Query: 431 RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK 463
R+ + LV TD+ +RG+D+ V+ VIN D PK
Sbjct: 416 RSSSTSILVATDVASRGLDVTGVSHVINLDLPK 448
>Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:40632868-40627375 | 20130731
Length = 619
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 8/340 (2%)
Query: 158 LLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID-HDNNVI 216
LL + E GF +P+PIQ ++IP+ L + A A G+GKT AF P L K+ H +
Sbjct: 144 LLWKLAELGFREPTPIQRQAIPVLLQDRECFACAPTGSGKTLAFVCPMLMKLKAHAKGGV 203
Query: 217 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 276
+ VI+ +REL+ QT + CK+L K K ++ + T D + +L+ TP R+
Sbjct: 204 RAVIICHSRELSGQTYRECKKLAKGEKFRIKLMTKNLLRNADFSKF--SCDILISTPLRL 261
Query: 277 LDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQIL--MYSATYPVTV 334
KK L LV+DE+DKL P+ I+ +I+ + N I+ ++SAT P V
Sbjct: 262 CLAIKKKKVDLSRVEYLVLDESDKLFEPQLFKQIDSIIKACT-NPSIIRSLFSATLPDFV 320
Query: 335 KDFKERYLRKPY-VINLMDELTLKGITQFYAFV-EERQKVHCLNTLFSKLQINQSIIFCN 392
+D + VI + I Q F E K+ + F++ ++F
Sbjct: 321 EDRARELMHDAVRVIVGRKNMASDTIKQKLVFTGSEEGKLLAIRQSFAESLNPPVLVFLQ 380
Query: 393 SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQA 452
S R + L ++ IH+ + Q+ R +FR G L+ TD+ RG+D +
Sbjct: 381 SKERAKELYGELAFDNIRVDVIHSDLSQEERENAVDNFRAGKTWVLIATDVVARGMDFKG 440
Query: 453 VNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
+N VIN+DFP +A Y+HR+GRSGR G G A+ T ED
Sbjct: 441 INCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEED 480
>Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348854-14341230 | 20130731
Length = 684
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 191/383 (49%), Gaps = 34/383 (8%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FE L E++ + E G E P+ IQ +P L G ++ + G+GKT A+ +P ++
Sbjct: 111 FEGLGLGDEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQL 170
Query: 209 IDHD---NNVI------QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDI 259
+ D N ++ + V+L PTREL+ Q +V K + H + + + +GG L+
Sbjct: 171 LRRDEQMNGLVLKPKRPRAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSGGGRLRPQE 230
Query: 260 MRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSP 319
L P+ ++VGTPGRIL ++G + D +V+DEAD + F P I+ +FL+P
Sbjct: 231 ESLSNPIDMVVGTPGRILQHIEEGNMVYGDIQYVVLDEADTMFDRGFGPDIK---KFLAP 287
Query: 320 NR-----------QILMYSATYPVTVKDFKERYLRKPYVINLMDELTLKGITQF-YAFVE 367
+ Q ++ +AT V++ + + +++L K I+ + F++
Sbjct: 288 LKHRASKPDSLGFQTVLVTATMTKAVQNLVDEEFQG--IVHLRTSSLHKKISNARHDFIK 345
Query: 368 ERQKVHCLNTLFSKLQI-----NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDH 422
+ L++L L+ N+ ++FCN++N + + E S H ++
Sbjct: 346 LSGTENKLDSLLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQ 405
Query: 423 RNRVFHDFR--NGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGH 480
R + F+ N C LVCTDL RG+D+ V+ VI FDFP N+ YLHR GR+ R G
Sbjct: 406 RVENLNKFKSNNDDCPTLVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGA 464
Query: 481 LGLAVNLITYEDRFNLYRIEQEL 503
G +L+T +D +IE+ +
Sbjct: 465 KGKITSLVTKKDYSLATKIEEAI 487
>Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:20125418-20119486 | 20130731
Length = 681
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 188/392 (47%), Gaps = 31/392 (7%)
Query: 147 NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
N ++ + L M + E E PIQ + L GSD++ RA+ G GKT AF +P L
Sbjct: 102 NAVSNFRISEPLRMKLKENKIEALFPIQAMTFNTILDGSDLVGRARTGQGKTLAFVLPIL 161
Query: 207 EKIDHD----------NNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 256
E + + V V++L+PTRELA Q + G L + GG
Sbjct: 162 ESLTNGPAKSVRKTGYGRVPSVIVLLPTRELANQVYADFELYGSSLGLSACAVYGGAPYG 221
Query: 257 DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQF 316
+L + V +++GTPGRI D ++G L V+DEAD++L F +E ++
Sbjct: 222 AQETKLRRGVDIVIGTPGRIKDHIERGNIDLSHLKFRVLDEADEMLRMGFVDDVELILGK 281
Query: 317 LS--PNRQILMYSATYPVTVKDFKERYLRK-PYVINLMDELTLKGITQFYAFVEERQKVH 373
+ Q L++SAT P VK ++L+ +L+ +K T + +
Sbjct: 282 VQDVTKVQTLLFSATLPSWVKQISTKFLKSDKKTADLVGNEKMKASTNVRHII-----LP 336
Query: 374 CLNTLFSKLQINQSIIFC-NSVNRVELLAKK------ITELGYSCFYIHAKMLQDHRNRV 426
C +T ++ Q+ II C +S R + A+K + L +H + Q R
Sbjct: 337 CSST--ARAQLIPDIIRCYSSGGRTIIFAEKKESASELAGLLPGARALHGDIQQSQREIT 394
Query: 427 FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVN 486
FR+G LV T++ RG+DI V ++I + P++ E Y+HR GR+GR G+ G+AV
Sbjct: 395 LKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVM 454
Query: 487 LITYED-RFNLYRIEQELGTEIKQI-PPHIDQ 516
L Y+ R N+ +IE+E G + + + P D+
Sbjct: 455 L--YDPRRSNIAKIEREAGIKFEHVSAPQPDE 484
>Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40427970-40421694 | 20130731
Length = 747
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 170/326 (52%), Gaps = 15/326 (4%)
Query: 173 IQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHD----NNVIQVVILVPTRELA 228
IQ S+P AL G D+L AK G+GKT AF IP LEK+ + + + +I+ PTRELA
Sbjct: 101 IQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKLHRERWGTEDGVGSIIISPTRELA 160
Query: 229 LQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILK 288
Q V +G+H + + GG +++L+ TPGR+L +
Sbjct: 161 GQIFGVLNAIGEHHRFSAGLLIGGGGDVAIEKECVNKLNILICTPGRLLQHMDETPNF-- 218
Query: 289 DCS---MLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKP 345
DCS +LV+DEAD++L F+ + +I L RQ +++SAT +V+D L+ P
Sbjct: 219 DCSQMQVLVLDEADRILDSGFKKEVNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDP 278
Query: 346 YVINLMDE---LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAK 402
I++ +E T + Q V QK+ L T + +++++F +S +V+ + +
Sbjct: 279 EYISVHEESVTATPTLLKQTVMIVPLDQKLDMLWTFIKRHLQSKTLVFLSSCKQVKFVFE 338
Query: 403 KITEL--GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDI-QAVNVVINF 459
+L G +H +M Q+ R ++ +F L TD+ RG+D +AV+ V+
Sbjct: 339 VFKKLHPGIPLKCLHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQV 398
Query: 460 DFPKNAETYLHRVGRSGRYGHLGLAV 485
D P+N +Y+HRVGR+ RY +G +V
Sbjct: 399 DCPENVASYIHRVGRTARYNSVGKSV 424
>Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 163/320 (50%), Gaps = 15/320 (4%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F DY L I + GF +P+PIQ + P+ALTG D++ A+ G+GKT ++ +PA+
Sbjct: 208 FPDYCLDV-----IAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVH 262
Query: 209 IDHDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 263
+ ++Q V++L PTRELA+Q Q + G I+ GG I L
Sbjct: 263 VSAQPRLVQGEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLR 322
Query: 264 QPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQI 323
V +++ TPGR++D+ + L+ + LV+DEAD++L F+P I +++ + P+RQ
Sbjct: 323 MGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQT 382
Query: 324 LMYSATYPVTVKDFKERYLRKPYVINLMDELTLKG---ITQFYAFVEERQKVHCLNTLFS 380
L +SAT+P V+ ++L PY + ++ LK I Q V + +K + L L
Sbjct: 383 LYWSATWPKEVESLARQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLK 441
Query: 381 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 439
++ I IF + + + +++ G+ IH Q R+ V +F++G +
Sbjct: 442 EVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMT 501
Query: 440 CTDLFTRGIDIQAVNVVINF 459
TD+ RG+ V ++ F
Sbjct: 502 ATDVAARGLGRITVFRILGF 521
>Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 163/320 (50%), Gaps = 15/320 (4%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F DY L I + GF +P+PIQ + P+ALTG D++ A+ G+GKT ++ +PA+
Sbjct: 208 FPDYCLDV-----IAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVH 262
Query: 209 IDHDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 263
+ ++Q V++L PTRELA+Q Q + G I+ GG I L
Sbjct: 263 VSAQPRLVQGEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLR 322
Query: 264 QPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQI 323
V +++ TPGR++D+ + L+ + LV+DEAD++L F+P I +++ + P+RQ
Sbjct: 323 MGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQT 382
Query: 324 LMYSATYPVTVKDFKERYLRKPYVINLMDELTLKG---ITQFYAFVEERQKVHCLNTLFS 380
L +SAT+P V+ ++L PY + ++ LK I Q V + +K + L L
Sbjct: 383 LYWSATWPKEVESLARQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLK 441
Query: 381 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 439
++ I IF + + + +++ G+ IH Q R+ V +F++G +
Sbjct: 442 EVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMT 501
Query: 440 CTDLFTRGIDIQAVNVVINF 459
TD+ RG+ V ++ F
Sbjct: 502 ATDVAARGLGRITVFRILGF 521
>Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 163/320 (50%), Gaps = 15/320 (4%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F DY L I + GF +P+PIQ + P+ALTG D++ A+ G+GKT ++ +PA+
Sbjct: 208 FPDYCLDV-----IAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVH 262
Query: 209 IDHDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 263
+ ++Q V++L PTRELA+Q Q + G I+ GG I L
Sbjct: 263 VSAQPRLVQGEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLR 322
Query: 264 QPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQI 323
V +++ TPGR++D+ + L+ + LV+DEAD++L F+P I +++ + P+RQ
Sbjct: 323 MGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQT 382
Query: 324 LMYSATYPVTVKDFKERYLRKPYVINLMDELTLKG---ITQFYAFVEERQKVHCLNTLFS 380
L +SAT+P V+ ++L PY + ++ LK I Q V + +K + L L
Sbjct: 383 LYWSATWPKEVESLARQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLK 441
Query: 381 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 439
++ I IF + + + +++ G+ IH Q R+ V +F++G +
Sbjct: 442 EVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMT 501
Query: 440 CTDLFTRGIDIQAVNVVINF 459
TD+ RG+ V ++ F
Sbjct: 502 ATDVAARGLGRITVFRILGF 521
>Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 163/320 (50%), Gaps = 15/320 (4%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F DY L I + GF +P+PIQ + P+ALTG D++ A+ G+GKT ++ +PA+
Sbjct: 208 FPDYCLDV-----IAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVH 262
Query: 209 IDHDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 263
+ ++Q V++L PTRELA+Q Q + G I+ GG I L
Sbjct: 263 VSAQPRLVQGEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLR 322
Query: 264 QPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQI 323
V +++ TPGR++D+ + L+ + LV+DEAD++L F+P I +++ + P+RQ
Sbjct: 323 MGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQT 382
Query: 324 LMYSATYPVTVKDFKERYLRKPYVINLMDELTLKG---ITQFYAFVEERQKVHCLNTLFS 380
L +SAT+P V+ ++L PY + ++ LK I Q V + +K + L L
Sbjct: 383 LYWSATWPKEVESLARQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLK 441
Query: 381 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 439
++ I IF + + + +++ G+ IH Q R+ V +F++G +
Sbjct: 442 EVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMT 501
Query: 440 CTDLFTRGIDIQAVNVVINF 459
TD+ RG+ V ++ F
Sbjct: 502 ATDVAARGLGRITVFRILGF 521
>Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:46249372-46245255 | 20130731
Length = 641
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 191/401 (47%), Gaps = 46/401 (11%)
Query: 147 NEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
N + + L + EKG E PIQ + I L G D++ RA+ G GKT AF +P L
Sbjct: 43 NGISKFKISEPLREKLKEKGIESLFPIQAMTFDIILQGCDLVGRARTGQGKTLAFVLPIL 102
Query: 207 EKI-------------DHDNNVIQ-------------VVILVPTRELALQTSQVCKELGK 240
E + + + N + V++L+PTRELA Q + + G
Sbjct: 103 ESVTNGKAKETNAKTKETNGNARESRKGGYGGPPKPSVLVLLPTRELACQVNADFEVYGG 162
Query: 241 HLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADK 300
+ + GG K ++L + V +++GTPGRI D +G L V+DEAD+
Sbjct: 163 AMGLTSCCLYGGAPYKAQEIKLERGVDIVIGTPGRIKDHIVRGSIDLSQLKFRVLDEADE 222
Query: 301 LLSPEFQPSIEQLIQFLSPNRQI--LMYSATYPVTVKDFKERYLRK-PYVINLMDELTLK 357
+L F +E ++ + Q+ L++SAT P VK+ +R+L++ +L+ +K
Sbjct: 223 MLRMGFVEDVELILGKVKNVDQVQTLLFSATLPEWVKNIAKRFLKEDKQTADLVGNTKMK 282
Query: 358 GITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELL-------AKKITELGYS 410
T ++ + C T ++ Q+ II C S ++ A ++ EL
Sbjct: 283 ASTSVRHYI-----LPC--TGAARSQLIPDIIRCYSSEGRTIIFTETKESASQLAELLPG 335
Query: 411 CFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLH 470
+H + Q R FR G LV T++ RG+DI V ++I + P++ E Y+H
Sbjct: 336 ARALHGDIQQAQREVTLSGFRYGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIH 395
Query: 471 RVGRSGRYGHLGLAVNLITYED-RFNLYRIEQELGTEIKQI 510
R GR+GR G+ G+AV L Y+ R N+ +IE+E G + + I
Sbjct: 396 RSGRTGRAGNTGVAVML--YDPRRSNIPKIERESGVKFEHI 434
>Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10126329 | 20130731
Length = 458
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 170/337 (50%), Gaps = 32/337 (9%)
Query: 159 LMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI--------D 210
L G+ + G+EK + +QE ++P+ L G D+LA+AK GTGKT AF +P++E +
Sbjct: 117 LKGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPSDPG 176
Query: 211 HDNNVIQVVILVPTRELALQ-TSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ-PVHL 268
I V+++ PTRELA Q ++ K L H I V GGT + + R+ + P +
Sbjct: 177 QSQTPILVLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTKIVSEQKRIQKNPCQI 236
Query: 269 LVGTPGRILD-LAKKG--VCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILM 325
LV TPGR+ D +AK L V+DEAD+LL F+ IE++I + RQ LM
Sbjct: 237 LVATPGRLKDHIAKTAGFASNLMGLKTFVIDEADRLLDMGFRKDIEEIITSVPKQRQTLM 296
Query: 326 YSATYPVTVKDFKERYLRKPY-VINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 384
+SAT P V L+K Y IN + E G + ++ V + + L+ FS L +
Sbjct: 297 FSATIPKAVHQVCNVALKKDYEFINTVQE----GTEETHSQVRQMHLIAPLDKHFSLLSV 352
Query: 385 -----------NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 433
+ ++FC + L+A + +L + I+++ Q RNRV +FR
Sbjct: 353 ILKEHIADEVDYKVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKKQGFRNRVSDEFRKS 412
Query: 434 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLH 470
LV +D+ RG+D V++V+ + E + H
Sbjct: 413 KRLILVTSDVSARGVDYPDVSLVVQVKY---VELHFH 446
>Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:32167186-32161537 | 20130731
Length = 589
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 190/381 (49%), Gaps = 29/381 (7%)
Query: 133 DTRYQTEDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAK 192
++ + + +T+T+ ++ + L +L + + F+ +P+Q +IP+ + D+ A
Sbjct: 2 ESEFPNKALTSTRFSDLKPP-LSEPVLQALTDSNFDFCTPVQAATIPLLCSYKDVAVDAA 60
Query: 193 NGTGKTAAFCIPALEKIDHDNN-----VIQVVILVPTRELALQTSQVCKELGKHL-KIQV 246
G+GKT AF IP +E + + + + VI+ PTRELA Q V + L ++
Sbjct: 61 TGSGKTLAFVIPLVEILRRNASNPKPHQVLGVIISPTRELASQIYHVAQPFISTLANVKS 120
Query: 247 MVTTGGTSLKDDIMRLYQP-VHLLVGTPGRILDLAKK-GVCILKDCSMLVMDEADKLLSP 304
M+ GG +K DI ++ + ++L+GTPGR+ D+ + + K +L++DEAD+LL
Sbjct: 121 MLLVGGVEVKADIKKIEEEGANVLIGTPGRLHDIMNRMDILDFKSFEILILDEADRLLDM 180
Query: 305 EFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVINLMDEL---------- 354
FQ I +I L R+ ++SAT V++ + LR P + + E
Sbjct: 181 GFQKQINAIITELPKLRRTGLFSATQTQAVEELAKAGLRNPVRVEVRAETKTANDSASSK 240
Query: 355 ------TLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIF---CNSVNRVELLAKKIT 405
T G+ Y E +K L K + + II+ C V+ L+ +++
Sbjct: 241 KIESSKTPSGLQIEYLECEADKKPSQLVDFLVKNRSKKIIIYFMTCACVDYWGLVLPRLS 300
Query: 406 EL-GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKN 464
L G+S +H KM Q R + F + + L+CTD+ RG+DI V+ ++ +D P++
Sbjct: 301 VLKGFSLISLHGKMKQSVREKALTSFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQD 360
Query: 465 AETYLHRVGRSGRYGHLGLAV 485
++HRVGR+ R G G AV
Sbjct: 361 PNVFVHRVGRTARLGKQGHAV 381
>Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25903244-25908935 | 20130731
Length = 752
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 165/326 (50%), Gaps = 16/326 (4%)
Query: 173 IQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHD----NNVIQVVILVPTRELA 228
IQ S+P AL G D+L AK G+GKT AF IP LEK+ + + +I+ PT ELA
Sbjct: 101 IQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKLYRKRWGPEDGVGSIIISPTWELA 160
Query: 229 LQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILK 288
Q V K +G + GG +++L+ TPGR+L +
Sbjct: 161 GQIFAVLKAIGCIHGFSAGLLIGGRQGVATEKECVNKLNVLICTPGRLLQHMDETPNF-- 218
Query: 289 DCS---MLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKP 345
DCS +LV+DEAD++L F+ + +I L RQ +++SAT +V+D L+ P
Sbjct: 219 DCSKMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDP 278
Query: 346 YVINLMDE---LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAK 402
I++ +E T + Q V QK+ L +++++F +S +V+ + +
Sbjct: 279 EYISVHEESVTATPTLLKQKVMIVPLDQKLDMLWNFIKTHLKSKTLVFLSSCKQVKFVFE 338
Query: 403 KITEL--GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDI-QAVNVVINF 459
+L G +H +M Q+ R ++ +F C L TD+ RG+D +AV+ V+
Sbjct: 339 AFKKLHPGIPLKCLHGRMKQEKRMAIYSEFCE-KCSILFATDVAARGLDFNRAVDWVVQV 397
Query: 460 DFPKNAETYLHRVGRSGRYGHLGLAV 485
D P+N +Y+HRVGR+ RY LG +V
Sbjct: 398 DCPENVASYIHRVGRTARYKSLGKSV 423
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 191/429 (44%), Gaps = 80/429 (18%)
Query: 139 EDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIAL-TGSDILARAKNGTGK 197
E++ T+ + + L L+ I++ GF++P+PIQ+ +P A G D++ A+ G+GK
Sbjct: 154 ENIDETEYYAWNELRLHPRLMKAIHKLGFKEPTPIQKACVPAAAHQGKDVIGAAETGSGK 213
Query: 198 TAAFCIPALEKIDHD---------------------NNVIQVVILVPTRELALQTSQVCK 236
T AF +P L+++ + +++ +I+ PTRELALQ ++ K
Sbjct: 214 TLAFGLPILQRLLEEREKAESISGVNGEEAAEKYATTGLLRSLIIAPTRELALQVAKHLK 273
Query: 237 ELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKG---VCILKDCSML 293
+ KH+ ++V GG + L ++V TPGR+ +L G + L S
Sbjct: 274 AVAKHINVRVTAIVGGILPEKQERLLKARPEIVVATPGRLWELMSSGEKHLIELHSLSFF 333
Query: 294 VMDEADKLLSPEFQPSIEQLIQFL------------------------SPNRQILMYSAT 329
V+DEAD+++ ++ +I L RQ L++SAT
Sbjct: 334 VLDEADRMVQSGHFKELQSIIDMLPMSNISSEDNSKDAQNCVTVSSIQKKKRQTLVFSAT 393
Query: 330 YPVTVKDFKERYLR---------------------------KPYVINLMDE--LTLKGIT 360
++ DF+++ R +I+L + L K
Sbjct: 394 VALSA-DFRKKLKRGSIQKKQLSTDGLDSIETLSERAGMRPNAAIIDLTNPSILAAKIEE 452
Query: 361 QFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQ 420
F E+ + H L Q ++I+FC S+ + ++ + LG + + +HA+M Q
Sbjct: 453 SFIECTEDDKDAHLYYILTVHGQ-GRTIVFCTSIAALRHISSILRILGVNVWTLHAQMQQ 511
Query: 421 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGH 480
R + FR LV TD+ RG+DI V V+++ P +AE Y+HR GR+ R
Sbjct: 512 RARLKAMDRFRENDNGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASA 571
Query: 481 LGLAVNLIT 489
G ++ LI+
Sbjct: 572 EGCSIALIS 580
>Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:37010922-37003111 | 20130731
Length = 604
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 181/395 (45%), Gaps = 51/395 (12%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
FE+ L L+ + +K EKP+PIQ +IP+ L G D++ARAK G+GKT A+ +P L+K
Sbjct: 27 FEELGLDARLVRALLKKRIEKPTPIQHVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQK 86
Query: 209 -----IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQV-MVTTGGTSLKDDI-MR 261
+D V +L P+REL Q K L + K+ + V L D+
Sbjct: 87 LFTANVDRKKLAPNVFVLAPSRELCQQIYVEVKSLLELCKVPLKAVQLNSNMLATDLQAA 146
Query: 262 LYQPVHLLVGTPGRILDLAKKGV----CILKDCSMLVMDEADKLLSPEFQPSIEQLIQFL 317
L P +L+ TP I V I LV+DEAD LLS ++ I+ L +
Sbjct: 147 LVGPPDVLISTPACIAKCLSNSVLQAASINGSLETLVLDEADLLLSYGYENDIKALTPHI 206
Query: 318 SPNRQILMYSATYPVTVKDFKERYLRKPYVINL------MDELTLKGITQFYAFVEERQK 371
+ Q L+ SAT V K+ L P ++ L DE+ K + QF+ + K
Sbjct: 207 PRSCQCLLMSATSSDDVDKLKKLMLHNPVILTLPEVGNRKDEVIPKNVQQFWIYCPANDK 266
Query: 372 -VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDF 430
++ L L +L + +IF N+++ L + + G ++A++ Q+ R + +F
Sbjct: 267 LLYILAMLKLELVQKKVLIFTNNIDTSFRLKLFLEKFGIKSAVLNAELPQNSRLHILEEF 326
Query: 431 RNGACRNLVCTDL---------------------------------FTRGIDIQAVNVVI 457
G L+ TD+ RGID + V VI
Sbjct: 327 NAGLFDYLIATDISQSTEKDEAPKENIVGSKKSRKYTKLKLDSEFGVVRGIDFKNVYTVI 386
Query: 458 NFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYED 492
NF+ P++ Y+HR+GR+GR G +++L++ ++
Sbjct: 387 NFEMPRSVTGYVHRIGRTGRAYSSGTSISLVSTDE 421
>Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:26668487-26670676 | 20130731
Length = 552
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 185/423 (43%), Gaps = 69/423 (16%)
Query: 146 GNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA 205
F + + L+ + ++GF P+ +Q ++P L D++ ++ G+GKT A+ +P
Sbjct: 107 AKSFSELGIPEVLIERLGKEGFNVPTDVQSAAVPTILKNRDVIIQSYTGSGKTLAYLLPI 166
Query: 206 LEKIDHDNNV----------------IQVVILVPTRELALQTSQVCKELGKHLK------ 243
L I ++ VI+ P+REL +Q + +E K L
Sbjct: 167 LSVIGPLKGENNEGGGDGGESGKKLGVEAVIVAPSRELGMQ---IVREFEKILGMENRKV 223
Query: 244 IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLS 303
+Q +V + +++ ++ +P ++VGTPGRI +L+ G C LV+DE D+LLS
Sbjct: 224 VQQLVGGANRTRQEEALKKNKPA-IVVGTPGRIAELSASGKLRAHGCQYLVLDEVDELLS 282
Query: 304 PEFQPSIEQLIQFLS-------------PNRQILMYSATYPVTVKDFKERYLRKPYVINL 350
F+ + +L++ + RQ++M SAT P +V + + P ++
Sbjct: 283 FNFREDMHRLLEHVGRRSGADHNSKAKKTERQLIMVSATVPFSVVRAAKSWGSDPLLVQA 342
Query: 351 MDELTLKGIT------------------------------QFYAFVEERQKVHCLNTLFS 380
+ L+ ++ +Y V + KV L
Sbjct: 343 KKIVPLETLSPEPVKLSPSSSSTPSVPSKAVVESLPPALKHYYCVVRLQHKVDTLRRCIH 402
Query: 381 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 440
L I+F N +++ + K+ G +H + + R+ F+NG R LV
Sbjct: 403 ALDAKFVIVFMNHTKQLKDVVFKLEARGVKAAELHGDLGKLGRSTTLKKFKNGEVRVLVT 462
Query: 441 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIE 500
+L RG+D+ ++V+N D P ++ Y HR GR+GR G G + + + F + +++
Sbjct: 463 NELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVLTICEESEVFVVRKLK 522
Query: 501 QEL 503
++L
Sbjct: 523 KQL 525
>Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348848-14341230 | 20130731
Length = 508
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 154/306 (50%), Gaps = 25/306 (8%)
Query: 217 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 276
+ V+L PTREL+ Q +V K + H + + + +GG L+ L P+ ++VGTPGRI
Sbjct: 12 RAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSGGGRLRPQEESLSNPIDMVVGTPGRI 71
Query: 277 LDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNR-----------QILM 325
L ++G + D +V+DEAD + F P I+ +FL+P + Q ++
Sbjct: 72 LQHIEEGNMVYGDIQYVVLDEADTMFDRGFGPDIK---KFLAPLKHRASKPDSLGFQTVL 128
Query: 326 YSATYPVTVKDFKERYLRKPYVINLMDELTLKGITQF-YAFVEERQKVHCLNTLFSKLQ- 383
+AT V++ + + +++L K I+ + F++ + L++L L+
Sbjct: 129 VTATMTKAVQNLVDEEFQ--GIVHLRTSSLHKKISNARHDFIKLSGTENKLDSLLQVLEP 186
Query: 384 ----INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFR--NGACRN 437
N+ ++FCN++N + + E S H ++ R + F+ N C
Sbjct: 187 SLAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQRVENLNKFKSNNDDCPT 246
Query: 438 LVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLY 497
LVCTDL RG+D+ V+ VI FDFP N+ YLHR GR+ R G G +L+T +D
Sbjct: 247 LVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKITSLVTKKDYSLAT 305
Query: 498 RIEQEL 503
+IE+ +
Sbjct: 306 KIEEAI 311
>Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:21899223-21892509 | 20130731
Length = 613
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 163/397 (41%), Gaps = 80/397 (20%)
Query: 166 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQ------VV 219
GFE P+ IQ ++IP+ L+G L A GTGKT A+ P + + + +Q +
Sbjct: 63 GFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQSYDKRVQRSDGTFAL 122
Query: 220 ILVPTRELALQTSQVCKELGKHLKIQV-MVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 278
+LVPTREL LQ ++ ++L V GG S + RL + + +L+ TPGR+LD
Sbjct: 123 VLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEKARLRKGISILIATPGRLLD 182
Query: 279 -LAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSP------------------ 319
L + + ++ DEAD++L F I++++ L
Sbjct: 183 HLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLGSMKTGHDDQESGVPRPSKF 242
Query: 320 NRQILMYSATYPVTVKDFKERYLRKPYVINLMDEL------------------------T 355
RQ L+ SAT V + L P +I + D++
Sbjct: 243 QRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKIMEPTSRIRFDNSDCDEDNEDTHSSK 302
Query: 356 LKGITQFYA---FVEERQKVHC----------LNTLFSKLQINQSIIFCNSVNRVELLAK 402
+ I + ++ KV C L LF + + ++F ++ + V+
Sbjct: 303 IPAIGAYKVPEQLIQRYMKVPCGSRLAILLSILKHLFEREPSQKVVLFFSTCDAVDFHYS 362
Query: 403 KITE-----------------LGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 445
ITE LG +H M Q+ R F F+ L+ TD+
Sbjct: 363 LITEFLFSSYPQTEEGNRTMFLGCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSA 422
Query: 446 RGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLG 482
RG+D V +I +D P A Y+HRVGR+ R G G
Sbjct: 423 RGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERG 459
>Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890321-18881902 | 20130731
Length = 610
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 164/397 (41%), Gaps = 80/397 (20%)
Query: 166 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQ------VV 219
GFE P+ +Q ++IP+ L+G L A GTGKT A+ P + + + IQ +
Sbjct: 60 GFEGPTLVQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQSYDKRIQRSDGTFAL 119
Query: 220 ILVPTRELALQTSQVCKELGKHLKIQV-MVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 278
+LVPTREL LQ ++ ++L V GG S + RL + + +L+ TPGR+LD
Sbjct: 120 VLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEKARLRKGISILIATPGRLLD 179
Query: 279 -LAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSP------------------ 319
L + + ++ DEAD++L F I++++ L
Sbjct: 180 HLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLGSMKTGHDDQGNGVPRPTKF 239
Query: 320 NRQILMYSATYPVTVKDFKERYLRKPYVINLMDEL------------------------T 355
RQ L+ SAT V + L P +I + D++
Sbjct: 240 QRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKVLEPTSKIRFDNSDCDEDNEGTYSSK 299
Query: 356 LKGITQFYA---FVEERQKVHC----------LNTLFSKLQINQSIIFCNSVNRVELLAK 402
+ + + ++ KV C L LF + + ++F ++ + V+
Sbjct: 300 IPAVGAYKVPEQLIQRYMKVPCGSRLAILLSILKHLFEREPSQKIVLFFSTCDAVDFHYS 359
Query: 403 KITELGYSCF-----------------YIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 445
+TE +S F +H M Q+ R F F+ L+ TD+
Sbjct: 360 LLTEFLFSAFPQTEEGNRPMFLGCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSA 419
Query: 446 RGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLG 482
RG+D V +I +D P A Y+HRVGR+ R G G
Sbjct: 420 RGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERG 456
>Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561636 | 20130731
Length = 314
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 126/223 (56%), Gaps = 12/223 (5%)
Query: 132 PDTRYQTEDVTATK-------GNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTG 184
PDT + ATK + F D+ LK ELL I + GFE PS +Q E IP A+ G
Sbjct: 24 PDTNGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG 83
Query: 185 SDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHL-K 243
D++ +AK+G GKTA F + L++ID + ++L TRELA Q + +L
Sbjct: 84 MDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYLPD 143
Query: 244 IQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKL 301
++V V GG ++K D+++ P ++VGTPGRIL LA++ LK+ V+DE DK+
Sbjct: 144 LKVAVFYGGVNIKVHKDLLKNECP-QIVVGTPGRILALAREKNLSLKNVRHFVLDECDKM 202
Query: 302 L-SPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLR 343
L S + + ++ + + ++Q++M+SAT ++ +++++
Sbjct: 203 LESLDMRKDVQDIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
>Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49558567 | 20130731
Length = 314
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 126/223 (56%), Gaps = 12/223 (5%)
Query: 132 PDTRYQTEDVTATK-------GNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTG 184
PDT + ATK + F D+ LK ELL I + GFE PS +Q E IP A+ G
Sbjct: 24 PDTNGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG 83
Query: 185 SDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHL-K 243
D++ +AK+G GKTA F + L++ID + ++L TRELA Q + +L
Sbjct: 84 MDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYLPD 143
Query: 244 IQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKL 301
++V V GG ++K D+++ P ++VGTPGRIL LA++ LK+ V+DE DK+
Sbjct: 144 LKVAVFYGGVNIKVHKDLLKNECP-QIVVGTPGRILALAREKNLSLKNVRHFVLDECDKM 202
Query: 302 L-SPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLR 343
L S + + ++ + + ++Q++M+SAT ++ +++++
Sbjct: 203 LESLDMRKDVQDIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
>Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46124357-46130061 | 20130731
Length = 401
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 134/254 (52%), Gaps = 7/254 (2%)
Query: 231 TSQVCKELGKHLKIQ--VMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-LAKKGVCIL 287
T +V ++L KH + + + GG++ + + L + ++++V TPGR+LD L I
Sbjct: 2 THEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLAKGINIVVATPGRLLDHLQNTKRFIY 61
Query: 288 KDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKE-RYLRKPY 346
+ L++DEAD++L F+ ++Q+I+ L NRQ ++SAT V+D + P
Sbjct: 62 NNLKCLIIDEADRILEANFEDELKQIIKLLPKNRQTALFSATQTKKVEDLARLSFQTTPI 121
Query: 347 VINLMD---ELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKK 403
I++ D ++T +G+ Q Y V ++ L + + + + ++F +S N V+ A
Sbjct: 122 YIDVDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLKRHKSKKVMVFFSSCNSVKFHADI 181
Query: 404 ITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK 463
+ C I+ K Q R F DF L+CTD+ RG+DI +V+ ++ +D P
Sbjct: 182 FNHIHLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCTDVAARGLDIPSVDWILQYDPPD 241
Query: 464 NAETYLHRVGRSGR 477
+ Y+HRVGR+ R
Sbjct: 242 EPKEYIHRVGRTAR 255
>Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 175/380 (46%), Gaps = 10/380 (2%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSD-ILARAKNGTGKTAAFCIPALE 207
F D L +L+ + + P IQ E IP+AL G D ++ + +GK AF +P L+
Sbjct: 8 FTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQ 67
Query: 208 KIDHDN---NVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 264
+ N +L P+R+L + ++ + LG ++ + D ++ Q
Sbjct: 68 ALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQTNQILQ 127
Query: 265 PVHLLVGTPGRIL-DLAKKGVCILKDCSMLVMDEADKLLSPEFQPS-IEQLIQFLSPNRQ 322
HL+VGT ++ L L LV+ EAD LL+ +F+ + ++ + R+
Sbjct: 128 QPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSERR 187
Query: 323 ILMYSATYPVTVKDFKERYLRKPYVINLMDEL-TLKGITQFYAFVEERQKVHCLNTLFSK 381
++S+T V + LR P I++ + T+ Q F+ K L + ++
Sbjct: 188 TFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKDCYLVYILTE 247
Query: 382 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 441
+ +S +F + LLA + L + I + M Q + + F++G L+C+
Sbjct: 248 MTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSGKFNILLCS 307
Query: 442 DLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQ 501
+ RG+DI AV++VIN++ P++ Y+HRVG + GH+ A++ + + L IE+
Sbjct: 308 EAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT---GHVNAAISFVNPYEAGQLEMIER 364
Query: 502 ELGTEIKQIPPHIDQAIYCR 521
G ++ P + + R
Sbjct: 365 HTGKKLPVYPAPCENVLLWR 384
>Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 175/380 (46%), Gaps = 10/380 (2%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSD-ILARAKNGTGKTAAFCIPALE 207
F D L +L+ + + P IQ E IP+AL G D ++ + +GK AF +P L+
Sbjct: 8 FTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQ 67
Query: 208 KIDHDN---NVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 264
+ N +L P+R+L + ++ + LG ++ + D ++ Q
Sbjct: 68 ALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQTNQILQ 127
Query: 265 PVHLLVGTPGRIL-DLAKKGVCILKDCSMLVMDEADKLLSPEFQPS-IEQLIQFLSPNRQ 322
HL+VGT ++ L L LV+ EAD LL+ +F+ + ++ + R+
Sbjct: 128 QPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSERR 187
Query: 323 ILMYSATYPVTVKDFKERYLRKPYVINLMDEL-TLKGITQFYAFVEERQKVHCLNTLFSK 381
++S+T V + LR P I++ + T+ Q F+ K L + ++
Sbjct: 188 TFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKDCYLVYILTE 247
Query: 382 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 441
+ +S +F + LLA + L + I + M Q + + F++G L+C+
Sbjct: 248 MTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSGKFNILLCS 307
Query: 442 DLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQ 501
+ RG+DI AV++VIN++ P++ Y+HRVG + GH+ A++ + + L IE+
Sbjct: 308 EAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT---GHVNAAISFVNPYEAGQLEMIER 364
Query: 502 ELGTEIKQIPPHIDQAIYCR 521
G ++ P + + R
Sbjct: 365 HTGKKLPVYPAPCENVLLWR 384
>Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 175/381 (45%), Gaps = 10/381 (2%)
Query: 148 EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSD-ILARAKNGTGKTAAFCIPAL 206
F D L +L+ + + P IQ E IP+AL G D ++ + +GK AF +P L
Sbjct: 3 SFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPIL 62
Query: 207 EKIDHDN---NVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 263
+ + N +L P+R+L + ++ + LG ++ + D ++
Sbjct: 63 QALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQTNQIL 122
Query: 264 QPVHLLVGTPGRIL-DLAKKGVCILKDCSMLVMDEADKLLSPEFQPS-IEQLIQFLSPNR 321
Q HL+VGT ++ L L LV+ EAD LL+ +F+ + ++ + R
Sbjct: 123 QQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSER 182
Query: 322 QILMYSATYPVTVKDFKERYLRKPYVINLMDEL-TLKGITQFYAFVEERQKVHCLNTLFS 380
+ ++S+T V + LR P I++ + T+ Q F+ K L + +
Sbjct: 183 RTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKDCYLVYILT 242
Query: 381 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 440
++ +S +F + LLA + L + I + M Q + + F++G L+C
Sbjct: 243 EMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSGKFNILLC 302
Query: 441 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIE 500
++ RG+DI AV++VIN++ P++ Y+HRVG + GH+ A++ + + L IE
Sbjct: 303 SEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT---GHVNAAISFVNPYEAGQLEMIE 359
Query: 501 QELGTEIKQIPPHIDQAIYCR 521
+ G ++ P + + R
Sbjct: 360 RHTGKKLPVYPAPCENVLLWR 380
>Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382212-29375908 | 20130731
Length = 417
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 175/381 (45%), Gaps = 10/381 (2%)
Query: 148 EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSD-ILARAKNGTGKTAAFCIPAL 206
F D L +L+ + + P IQ E IP+AL G D ++ + +GK AF +P L
Sbjct: 3 SFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPIL 62
Query: 207 EKIDHDN---NVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 263
+ + N +L P+R+L + ++ + LG ++ + D ++
Sbjct: 63 QALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQTNQIL 122
Query: 264 QPVHLLVGTPGRIL-DLAKKGVCILKDCSMLVMDEADKLLSPEFQPS-IEQLIQFLSPNR 321
Q HL+VGT ++ L L LV+ EAD LL+ +F+ + ++ + R
Sbjct: 123 QQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSER 182
Query: 322 QILMYSATYPVTVKDFKERYLRKPYVINLMDEL-TLKGITQFYAFVEERQKVHCLNTLFS 380
+ ++S+T V + LR P I++ + T+ Q F+ K L + +
Sbjct: 183 RTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKDCYLVYILT 242
Query: 381 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 440
++ +S +F + LLA + L + I + M Q + + F++G L+C
Sbjct: 243 EMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSGKFNILLC 302
Query: 441 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIE 500
++ RG+DI AV++VIN++ P++ Y+HRVG + GH+ A++ + + L IE
Sbjct: 303 SEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT---GHVNAAISFVNPYEAGQLEMIE 359
Query: 501 QELGTEIKQIPPHIDQAIYCR 521
+ G ++ P + + R
Sbjct: 360 RHTGKKLPVYPAPCENVLLWR 380
>Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 175/381 (45%), Gaps = 10/381 (2%)
Query: 148 EFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSD-ILARAKNGTGKTAAFCIPAL 206
F D L +L+ + + P IQ E IP+AL G D ++ + +GK AF +P L
Sbjct: 3 SFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPIL 62
Query: 207 EKIDHDN---NVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 263
+ + N +L P+R+L + ++ + LG ++ + D ++
Sbjct: 63 QALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQTNQIL 122
Query: 264 QPVHLLVGTPGRIL-DLAKKGVCILKDCSMLVMDEADKLLSPEFQPS-IEQLIQFLSPNR 321
Q HL+VGT ++ L L LV+ EAD LL+ +F+ + ++ + R
Sbjct: 123 QQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSER 182
Query: 322 QILMYSATYPVTVKDFKERYLRKPYVINLMDEL-TLKGITQFYAFVEERQKVHCLNTLFS 380
+ ++S+T V + LR P I++ + T+ Q F+ K L + +
Sbjct: 183 RTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKDCYLVYILT 242
Query: 381 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 440
++ +S +F + LLA + L + I + M Q + + F++G L+C
Sbjct: 243 EMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSGKFNILLC 302
Query: 441 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIE 500
++ RG+DI AV++VIN++ P++ Y+HRVG + GH+ A++ + + L IE
Sbjct: 303 SEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT---GHVNAAISFVNPYEAGQLEMIE 359
Query: 501 QELGTEIKQIPPHIDQAIYCR 521
+ G ++ P + + R
Sbjct: 360 RHTGKKLPVYPAPCENVLLWR 380
>Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:33157541-33150855 | 20130731
Length = 497
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 177/398 (44%), Gaps = 73/398 (18%)
Query: 186 DILARAKNGTGKTAAFCIPALEKIDHD-NNVIQVVILVPTRELALQTSQVCKELGKHLKI 244
DI + G+GKT A+ +P ++ + ++ +++VPTR+LALQ QV + L +
Sbjct: 71 DICVNSPTGSGKTLAYALPLVQMLSGRVTKCLRALVVVPTRDLALQVKQVFDAVASPLGL 130
Query: 245 QVMVTTGGTSLKDDIMRL-----------YQP-----------VHLLVGTPGRILDLAKK 282
+V + G +SL D+I L Y P V +LV TPGR++D
Sbjct: 131 RVGLAVGQSSLADEISELVEMPARDIGTCYDPHCISLPRFQSKVDILVATPGRLMDHINT 190
Query: 283 GVCI-LKDCSMLVMDEADKLLSPEFQ---PSIEQLIQFLSPNRQILMYSATY-PVTVKDF 337
+ L+ LV+DE D+LL +Q P++ +LIQ S + + SA++ P +
Sbjct: 191 TIGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELIQ--SNDDGFSLPSASFFPCSASAL 248
Query: 338 KER--------YLRKPYV--------------------INLMDELTLKGITQFYAFVE-- 367
+ R + KPY +NL L LK Y E
Sbjct: 249 RTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLKAGQMRYRLPENL 308
Query: 368 ERQKVHC--------LNTLFSKLQINQSIIFCNSVNRVELLAKKIT---ELGYSCFYIHA 416
E K+ C L L L + ++F SV+ L + + +L +
Sbjct: 309 ESYKLICEKKVKPLYLIALLKSLGEEKCLVFTKSVDSTHRLCQLLNCFEDLRIDIKEYSS 368
Query: 417 KMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSG 476
Q R++ ++FR G + L+ +D TRG+D++ V VIN+D PK +T++HR GR+
Sbjct: 369 LQHQRVRSKTLNEFRKGVFQVLLSSDALTRGMDVEGVRNVINYDVPKFIKTHVHRAGRTA 428
Query: 477 RYGHLGLAVNLITYED--RFNLYRIEQELGTEIKQIPP 512
R G G L++ ++ RF + E G+ + I P
Sbjct: 429 RAGQTGRCFTLMSEDEVRRFKKLIGKAEGGSCLDHIVP 466
>Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:55283621-55286718 | 20130731
Length = 537
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 164/357 (45%), Gaps = 40/357 (11%)
Query: 158 LLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI-------- 209
++ ++ +PS IQ S P + G + ++G+GKT A+ +P ++++
Sbjct: 142 MIESLHNLSLTRPSNIQAMSFPPVIAGKSCIIADQSGSGKTLAYLVPIIQRLRQQELQGL 201
Query: 210 -DHDNNVIQVVILVPTRELALQTSQVCKELGKH--LKIQVMVTTGGTSLKDDIMRLYQPV 266
+ ++IL PT ELA Q C+ + K + + M+ TGG K + L Q V
Sbjct: 202 HKSSSQSPTLLILAPTAELASQVFHNCRSISKSGVVPFKSMLVTGGFRQKTQLDTLNQGV 261
Query: 267 HLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPE-FQPSIEQLIQFLSPNRQILM 325
+L+ TPGR L L +G L + + V+DE D L E F+ +++ LI + Q L
Sbjct: 262 DVLIATPGRFLFLINQGFLHLTNLTCAVLDEVDILFGDEDFEKALQCLISSSPVDTQYLF 321
Query: 326 YSATYPVTV-KDFKERYLRKPYVI--------NLMDELTL-------KGITQFYAFVEER 369
+AT P V E + V+ + ++E+ + + T AF+ ++
Sbjct: 322 VTATLPKNVYSKLVEVFPDCEMVMGPSMHRINSRLEEIIVDCSGEDGQEKTLDTAFLNKK 381
Query: 370 QKVHCLNTLFSKLQINQSIIFCNSVN---RVELLAKKITELG--YSCFYIHAKMLQDHRN 424
L L K ++ ++I+FCN + +VE + G HA M Q+ R
Sbjct: 382 A---ALLQLAEKNRVPRTIVFCNKIETCRKVENALNRFDRKGIRMQVLPFHAAMTQESRL 438
Query: 425 RVFHDFRNGACRNL----VCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
+F + L VCTD +RGID V+ VI FD+P++ Y+ RVGR+ R
Sbjct: 439 ASMKEFTRSPPKELSQFMVCTDRASRGIDFTRVDHVILFDYPRDPSEYVRRVGRTAR 495
>Medtr4g077370.1 | DEAD-box helicase family protein | LC |
chr4:29630577-29632466 | 20130731
Length = 446
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 3/217 (1%)
Query: 116 ADPSSQDWKARLKIPPPDTRYQTEDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQE 175
+ P S+ W + + ++ K F D L ++ G + G + P P+Q
Sbjct: 218 SKPGSRTWISPITTASYCNTTDCDNAGNDKHMSFSDLGLSEWMVRGCDKLGMQSPRPVQR 277
Query: 176 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVC 235
IP L G ++ K G+GKTAAF +P L+++ + ++L PTRELA+Q +
Sbjct: 278 HCIPKVLEGRHVIGIDKTGSGKTAAFALPILQRLGETPFGVFALVLTPTRELAVQLAHQF 337
Query: 236 KELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKG---VCILKDCSM 292
LG L++ + V GG + +L +L++ TP R+ L + I
Sbjct: 338 WILGSSLRLILTVVVGGLDKRIQAKQLVARPNLVIATPERLKILLQDNPEIAPIFAATKF 397
Query: 293 LVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSAT 329
LV+DEAD+LL FQ ++ + Q L NRQ L +SAT
Sbjct: 398 LVLDEADQLLDVGFQEELKVIFQCLPENRQNLFFSAT 434
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 93/216 (43%), Gaps = 27/216 (12%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F D L + + G + P +Q+ IP L G D++ + G+GKTAAF +P L++
Sbjct: 3 FSDLGLSEWTVQNCKKLGMQTPRRVQQHCIPKVLEGRDVVGIDETGSGKTAAFALPILQR 62
Query: 209 IDHDNNVIQV----VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 264
+ V ++L PTRELA+Q + LG L L
Sbjct: 63 LAEHPKPFGVYVFALVLTPTRELAIQLADQFLALGSSL-------------------LPT 103
Query: 265 PVHLLVGTPGRILDLAKKG---VCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNR 321
HL++ TP R+ L I LV+DEAD+LL F+ + ++Q L NR
Sbjct: 104 SPHLVIATPERLRVLLLDNPEIATIFATTKFLVLDEADQLLDVGFRDELNVIVQCLPENR 163
Query: 322 QILMYSATYPVTVKDFK-ERYLRKPYVINLMDELTL 356
Q L +S T +K +RY Y + L L
Sbjct: 164 QNLFFSETMTSNLKKMMYDRYRDNMYAFEACEGLKL 199
>Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:54963018-54968467 | 20130731
Length = 480
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 170/382 (44%), Gaps = 34/382 (8%)
Query: 157 ELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVI 216
+LL + E G+ P+P+Q++++P +G D + A+ G+GKT A+ + I +
Sbjct: 91 QLLQRMEEVGYVMPTPVQKQALPRLFSGRDCILHAQTGSGKTLAYLLLIYSIISTRKSSF 150
Query: 217 QVVILVPTRELALQTSQVCKEL--------GKHLKIQVM-VTTGGTSLKDDIMRLYQPVH 267
Q ++LVPTREL +Q ++V + L G+ +M + GGT + +P
Sbjct: 151 QALVLVPTRELGMQVTKVARILAAKPTGVEGEQRSCTIMALLDGGTLRRHKSWFKAEPPA 210
Query: 268 LLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQ-PSIEQLIQFLSP--NRQIL 324
++V T + + ++ + L + +LV+DE D + + Q S+ +++ S NRQ +
Sbjct: 211 IVVATVESLCQMLERQLFSLGNLRVLVVDEVDFIFNSSKQVSSLRKILTSYSSCNNRQTV 270
Query: 325 MYSATYPVTVKDFKERYLRKPYVINLMD------ELTLKGITQFYAFVEERQKVHCLNTL 378
SA+ P + E +K +++ E ++ + + ++K+ L +L
Sbjct: 271 FASASIPQHNQFLNEAVQQKWTKRDVIHIHVSPVEPMPSRLSHRFIVCDIKRKLQTLLSL 330
Query: 379 FSKLQINQSIIFCN-------------SVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 425
IIF + S + V K + M + R
Sbjct: 331 IQSDAPESGIIFVSEQSEKSKKAGNSPSTSLVIDFLKTSYHGSLDILLLEDDMNFNSRAA 390
Query: 426 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR--YGHLGL 483
+ R G LV TD+ RG+D + + N+D PK A YLHR GR+ R + +
Sbjct: 391 SLLEVRKGGGYLLVATDVAARGVDFPEMTHIYNYDLPKTAIDYLHRAGRTCRKPFSDVNC 450
Query: 484 AV-NLITYEDRFNLYRIEQELG 504
V ++I ++RF L R E EL
Sbjct: 451 TVTSIIVSQERFVLQRYENELS 472
>Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40426461-40421694 | 20130731
Length = 536
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 110/206 (53%), Gaps = 9/206 (4%)
Query: 289 DCS---MLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKP 345
DCS +LV+DEAD++L F+ + +I L RQ +++SAT +V+D L+ P
Sbjct: 8 DCSQMQVLVLDEADRILDSGFKKEVNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDP 67
Query: 346 YVINLMDE---LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAK 402
I++ +E T + Q V QK+ L T + +++++F +S +V+ + +
Sbjct: 68 EYISVHEESVTATPTLLKQTVMIVPLDQKLDMLWTFIKRHLQSKTLVFLSSCKQVKFVFE 127
Query: 403 KITEL--GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDI-QAVNVVINF 459
+L G +H +M Q+ R ++ +F L TD+ RG+D +AV+ V+
Sbjct: 128 VFKKLHPGIPLKCLHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQV 187
Query: 460 DFPKNAETYLHRVGRSGRYGHLGLAV 485
D P+N +Y+HRVGR+ RY +G +V
Sbjct: 188 DCPENVASYIHRVGRTARYNSVGKSV 213
>Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25904178-25909316 | 20130731
Length = 535
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 289 DCS---MLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSATYPVTVKDFKERYLRKP 345
DCS +LV+DEAD++L F+ + +I L RQ +++SAT +V+D L+ P
Sbjct: 8 DCSKMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDP 67
Query: 346 YVINLMDE---LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAK 402
I++ +E T + Q V QK+ L +++++F +S +V+ + +
Sbjct: 68 EYISVHEESVTATPTLLKQKVMIVPLDQKLDMLWNFIKTHLKSKTLVFLSSCKQVKFVFE 127
Query: 403 KITEL--GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDI-QAVNVVINF 459
+L G +H +M Q+ R ++ +F C L TD+ RG+D +AV+ V+
Sbjct: 128 AFKKLHPGIPLKCLHGRMKQEKRMAIYSEFCE-KCSILFATDVAARGLDFNRAVDWVVQV 186
Query: 460 DFPKNAETYLHRVGRSGRYGHLGLAV 485
D P+N +Y+HRVGR+ RY LG +V
Sbjct: 187 DCPENVASYIHRVGRTARYKSLGKSV 212
>Medtr8g031340.1 | DEAD-box helicase family protein | LC |
chr8:11739333-11738743 | 20130731
Length = 112
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/52 (86%), Positives = 48/52 (92%)
Query: 247 MVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEA 298
MVT GGTSLKDD+M LYQPVHLLV T GRILDLAKKGVC++KDCSMLVMDEA
Sbjct: 1 MVTIGGTSLKDDVMFLYQPVHLLVRTLGRILDLAKKGVCVIKDCSMLVMDEA 52
>Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:7041752-7035027 | 20130731
Length = 462
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 156/354 (44%), Gaps = 66/354 (18%)
Query: 170 PSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELAL 229
P IQ + IP+AL G D+ A + +GKT AF +P + ++ A
Sbjct: 26 PLKIQAQVIPLALEGKDVYAISPPRSGKTGAFVLPIFQALN----------------FAF 69
Query: 230 QTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCI-LK 288
+ ++ + LG+H ++ V + ++ ++ Q H++V TPG+++ K L+
Sbjct: 70 EIARYFEALGQHFGVKFAVLVSTSDMEYQTNKILQQPHIIVATPGKLVKHLKDTPAFSLR 129
Query: 289 DCSMLVMDEADKLLSPEFQPSIEQLIQF----LSPNRQILMYSATYPVTVKDFKERYLRK 344
LV+DEA LL ++ I++ ++F + NR ++S + V + +LR
Sbjct: 130 KLKYLVLDEA-HLLESNYK-HIDRQLEFILGKIPRNRTTFLFSDSKTDKVDMIQSVFLRN 187
Query: 345 PYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKI 404
P I DE +++ Q + + KV+ L C K I
Sbjct: 188 PVKI---DE-SIEYPEQQQCHMPAKDKVYPLP--------------C---------PKNI 220
Query: 405 TELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKN 464
Q R + F++G C+ L+C DL +RG+DI AV+ VIN+D P +
Sbjct: 221 VS-------------QAKRLEALNAFKSGNCKILLCNDLASRGLDIPAVDTVINYDIPDD 267
Query: 465 AETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 518
Y+H VG++ G+A++ ++ + IE +G ++ I++ +
Sbjct: 268 PRDYMHHVGQAAP---TGVAISFVSPNEARWFEMIETHIGKKLPVYQAQIEEVL 318
>Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:21843191-21840034 | 20130731
Length = 276
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
Query: 166 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQ------VV 219
GFE P+ IQ ++IP+ L+G L A GTGKT A+ P + + + +Q +
Sbjct: 60 GFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQSYDKRVQRSDGTFAL 119
Query: 220 ILVPTRELALQTSQVCKELGKHLKIQV-MVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 278
+LVPTREL LQ ++ ++L V GG S + RL + + +L+ TPGR+LD
Sbjct: 120 VLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEKARLRKGISILIATPGRLLD 179
Query: 279 -LAKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLS 318
L + + ++ DEAD++L F I++++ L
Sbjct: 180 HLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLG 220
>Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC |
scaffold0427:505-2043 | 20130731
Length = 227
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 39/213 (18%)
Query: 315 QFLSPNRQILMYSATYPVTVKDFKERYLRKPY--VINLMDELTLKGITQFYAFVEERQKV 372
Q + N Q+L +SAT VK+F R + K + + +EL LK + Q+ KV
Sbjct: 16 QKFNSNCQVLFFSATLNDIVKNFVTRIVAKEHNEIFVKKEELPLKAVKQY--------KV 67
Query: 373 HCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRN 432
HC + L + I C +V AK + +L Y I + + R+++ +F++
Sbjct: 68 HCPDEL--------AKIECKNV------AKALVDLSYKVNSILDALEHEERDKMVKEFKD 113
Query: 433 GACRNLVCTDLFTRGIDIQAVNVVINFDFPKN--------------AETYLHRVGRSGRY 478
G+ L+ D+ RG D VN+VIN+D P N E Y HRVGR+GR+
Sbjct: 114 GSTGVLISNDVLARGFDQDQVNLVINYDLPLNYTAEITCGGKPELDCEVYFHRVGRAGRF 173
Query: 479 GHLGLAVNLITYE-DRFNLYRIEQELGTEIKQI 510
G G NLI E D + +IE G + ++
Sbjct: 174 GRKGAVFNLICDERDEKLMSKIENHFGNHVTEV 206
>Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525893-18516340 | 20130731
Length = 727
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 158/362 (43%), Gaps = 49/362 (13%)
Query: 144 TKGNEFEDYFLKRELLMGIYEKGFEKPS--PIQEESIPIALTGSDILARAKNGTGKTAAF 201
T GN+ + +E L+ + F P +Q E+I L+G D G GK+ +
Sbjct: 15 TSGNKKKLELCSKESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCY 74
Query: 202 CIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDI-- 259
IPAL K + ++LV +AL +QV K + + + +T KD I
Sbjct: 75 QIPALAK--------EGIVLVVCPLIALMENQVMALKEKGIAAEFLSSTKTAKAKDKIHE 126
Query: 260 --------MRLYQPVHLLVGTPGRILDLAK---KGVCILKDCSMLVMDEADKLLS--PEF 306
RL L+ TPG + L K +G+ S++ +DEA + S +F
Sbjct: 127 DLGSGKPSTRLLYVTPELIATPGFMSKLTKIHSRGLL-----SLIAIDEAHCISSWGHDF 181
Query: 307 QPSIEQLIQFLS--PNRQILMYSAT-YPVTVKDFKERYLRKPYVINLMDELTLK-GITQF 362
+P+ +L S P+ IL +AT P KD E +++ + L LK +
Sbjct: 182 RPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVVES-------LHMQNALILKTSFNRP 234
Query: 363 YAFVEERQKVHCLNTLFSKLQINQ-------SIIFCNSVNRVELLAKKITELGYSCFYIH 415
+ E R K L+ +S L +II+C + + L+ +++ G SC H
Sbjct: 235 NIYYEVRYK-DLLDDSYSDLSDRLKSMGDVCAIIYCLERSMCDDLSAHLSQRGISCAAYH 293
Query: 416 AKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRS 475
A + R V HD+ + + +V T F GID + V +V +F+ PK+ E + GR+
Sbjct: 294 AGLNNKMRTSVLHDWISSKTKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRA 353
Query: 476 GR 477
GR
Sbjct: 354 GR 355
>Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525936-18516322 | 20130731
Length = 728
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 158/362 (43%), Gaps = 49/362 (13%)
Query: 144 TKGNEFEDYFLKRELLMGIYEKGFEKPS--PIQEESIPIALTGSDILARAKNGTGKTAAF 201
T GN+ + +E L+ + F P +Q E+I L+G D G GK+ +
Sbjct: 15 TSGNKKKLELCSKESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCY 74
Query: 202 CIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDI-- 259
IPAL K + ++LV +AL +QV K + + + +T KD I
Sbjct: 75 QIPALAK--------EGIVLVVCPLIALMENQVMALKEKGIAAEFLSSTKTAKAKDKIHE 126
Query: 260 --------MRLYQPVHLLVGTPGRILDLAK---KGVCILKDCSMLVMDEADKLLS--PEF 306
RL L+ TPG + L K +G+ S++ +DEA + S +F
Sbjct: 127 DLGSGKPSTRLLYVTPELIATPGFMSKLTKIHSRGLL-----SLIAIDEAHCISSWGHDF 181
Query: 307 QPSIEQLIQFLS--PNRQILMYSAT-YPVTVKDFKERYLRKPYVINLMDELTLK-GITQF 362
+P+ +L S P+ IL +AT P KD E +++ + L LK +
Sbjct: 182 RPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVVES-------LHMQNALILKTSFNRP 234
Query: 363 YAFVEERQKVHCLNTLFSKLQINQ-------SIIFCNSVNRVELLAKKITELGYSCFYIH 415
+ E R K L+ +S L +II+C + + L+ +++ G SC H
Sbjct: 235 NIYYEVRYK-DLLDDSYSDLSDRLKSMGDVCAIIYCLERSMCDDLSAHLSQRGISCAAYH 293
Query: 416 AKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRS 475
A + R V HD+ + + +V T F GID + V +V +F+ PK+ E + GR+
Sbjct: 294 AGLNNKMRTSVLHDWISSKTKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRA 353
Query: 476 GR 477
GR
Sbjct: 354 GR 355
>Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:16475815-16482952 | 20130731
Length = 462
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 160/347 (46%), Gaps = 34/347 (9%)
Query: 171 SPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE-----KIDHDNNVIQVVILVPTR 225
+ IQ ++IP+ L G D+ A + NG+GKT A+ IPAL+ K + D+ +I V++L P
Sbjct: 41 TSIQAKAIPLLLRGDDLAAYSSNGSGKTLAYLIPALDHLCKNKYEPDDGII-VMVLCPNT 99
Query: 226 ELALQTSQVCKELGKHLKIQVMVTTGG--TSLKDDIMRLYQPVHLLVGTPG--RILDLAK 281
+A+Q + K + K Q + T G S D +R +LL+ TP R
Sbjct: 100 MVAIQIDRDIKTILKD-SPQTLQTIGRLIASPGDRYVR----KNLLIATPAGLRYHHAYD 154
Query: 282 KGVCILKDCSMLVMDEADKLLSPEFQPSIEQL-IQFLSPNRQILMYSATYPVTVKDFKER 340
L+ D+ +L Q + F QI ++S T K +E
Sbjct: 155 PERIKYDKLKFLIFDDPYLILRFSDQKKWNWVRSNFPKEQLQIAIFSVT-----KLKREC 209
Query: 341 YLR------KPYVINLMDEL------TLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI 388
LR +P +++DE+ T + Q + V +++ L + + + +
Sbjct: 210 LLRLLPEGRRPGDFSVIDEVQNRQWVTNDRLEQEFILVPCAKRLITLYIMLKTTKSKKVM 269
Query: 389 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 448
+F ++ V+ + T L C+ +H +++++ F N L+CT++ G+
Sbjct: 270 VFFSTTESVKFHEELFTFLDVKCYGVHGDQTVSEHSKIYYSFSNAEEMILLCTNIAAFGL 329
Query: 449 DIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLA-VNLITYEDRF 494
+I V++++ +D P + E Y+H+VGR+ R G A + L+ +E RF
Sbjct: 330 NIPDVDLIVQYDPPIDPEEYIHKVGRTARGTRKGNALLFLMPHELRF 376
>Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890320-18881902 | 20130731
Length = 492
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 117/305 (38%), Gaps = 73/305 (23%)
Query: 251 GGTSLKDDIMRLYQPVHLLVGTPGRILD-LAKKGVCILKDCSMLVMDEADKLLSPEFQPS 309
GG S + RL + + +L+ TPGR+LD L + + ++ DEAD++L F
Sbjct: 34 GGESRSKEKARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKE 93
Query: 310 IEQLIQFLSP------------------NRQILMYSATYPVTVKDFKERYLRKPYVINLM 351
I++++ L RQ L+ SAT V + L P +I +
Sbjct: 94 IQEILNLLGSMKTGHDDQGNGVPRPTKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGID 153
Query: 352 DEL------------------------TLKGITQFYA---FVEERQKVHC---------- 374
D++ + + + ++ KV C
Sbjct: 154 DKVLEPTSKIRFDNSDCDEDNEGTYSSKIPAVGAYKVPEQLIQRYMKVPCGSRLAILLSI 213
Query: 375 LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCF-----------------YIHAK 417
L LF + + ++F ++ + V+ +TE +S F +H
Sbjct: 214 LKHLFEREPSQKIVLFFSTCDAVDFHYSLLTEFLFSAFPQTEEGNRPMFLGCKTLRLHGN 273
Query: 418 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 477
M Q+ R F F+ L+ TD+ RG+D V +I +D P A Y+HRVGR+ R
Sbjct: 274 MEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTAR 333
Query: 478 YGHLG 482
G G
Sbjct: 334 LGERG 338
>Medtr8g032230.1 | DEAD-box helicase family protein | HC |
chr8:12119817-12118310 | 20130731
Length = 171
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 149 FEDYFLKRELLMGIYEK-GFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 207
F+D L ELL+ +EK G++ P IQ ++IP AL G D++ ++ G+GKT AF +P L
Sbjct: 11 FKDLGLD-ELLVEAFEKMGWKNPKEIQLKAIPQALQGKDVIGFSQTGSGKTGAFALPILH 69
Query: 208 K-IDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 266
+D + ++ PTRELA Q + + LG + ++ V G + + + +
Sbjct: 70 ALLDAPRHGFFACVISPTRELAYQVPEQFEALGSEIGVKCAVLVGQMDMVQQSIEIAKGP 129
Query: 267 HLLVGTPGRILD 278
+ VGTPGR+LD
Sbjct: 130 DIFVGTPGRVLD 141
>Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:26237354-26229767 | 20130731
Length = 594
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 384 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 443
I+++++F N+V VE + K + G C H D R + DF + LVCTD
Sbjct: 435 IHRTMVFANTVEAVEAVVKILGYAGLECLRYHKNCTLDERAQTLVDFYDKGGV-LVCTDA 493
Query: 444 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLITYEDR--FNLYRIEQ 501
RG+DI V+ VI DF +A +LHR+GR+ R G +GL ++ T +R + R
Sbjct: 494 AARGVDIPNVSHVIQADFATSAVDFLHRIGRTARAGQIGLVTSMYTESNRELVDAVRRAG 553
Query: 502 ELGTEIK 508
ELG ++
Sbjct: 554 ELGLPVE 560
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 38/240 (15%)
Query: 119 SSQDWKARLKIPPPDTRYQTEDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESI 178
SS+D+ R DT + ++V+ + L L + PS +Q SI
Sbjct: 74 SSEDFNGR------DTFFAEDNVS------WSSIGLSHTLSRALSNIALNTPSLVQASSI 121
Query: 179 PIALTGSDILARAKNGTGKTAAFCIPALEKI----DHDNNVIQ-----------VVILVP 223
P L+G D++ A+ G+GKT ++ +P ++K+ ++ +V+ +++L P
Sbjct: 122 PSVLSGKDVVIAAETGSGKTYSYLLPLIDKLRGTEEYSLDVVSDKEISPPARKVLLVLCP 181
Query: 224 TRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLA--- 280
+L Q ++ L + +V+ K + +P ++V TP +L+
Sbjct: 182 NVQLCEQVVRMANSLCGD-NDETIVSAAAICGKQG-WPIREP-DIIVTTPAALLNHVDVD 238
Query: 281 -KKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIQFLSPNRQILMYSAT----YPVTVK 335
++ + + +V DEAD LL FQ + +LI L + ++L S T PVT++
Sbjct: 239 RRRRMEFMHGVKYVVFDEADMLLCGSFQNKVIRLINLLRYDEKLLSRSKTSVSELPVTLE 298
>Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr2:578880-586948 | 20130731
Length = 1159
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 159/383 (41%), Gaps = 51/383 (13%)
Query: 133 DTRYQTEDVTATKGNEFEDYFLKRELLMGIYEKGFEKPS--PIQEESIPIALTGSDILAR 190
D R+ + D + TK E + +K F S P Q E I ++G D+
Sbjct: 382 DKRWSSRDFSWTKELEVNN------------KKVFGNHSFRPNQREVINATMSGCDVFVL 429
Query: 191 AKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTT 250
G GK+ + +PAL + + LV + ++L Q+ L ++ +
Sbjct: 430 MPTGGGKSLTYQLPAL--------INPGITLVISPLVSLIQDQIMHLLQANIPAAYLSAN 481
Query: 251 GGTSLKDDIMRL----YQPVHLLVGTPGRILDLAKKGVCILKDCSM--------LVMDEA 298
+ + +I+R Y LL TP ++ A+ V + + S+ +V+DEA
Sbjct: 482 LEWAEQQEILRELNSDYCKYKLLYVTPEKV---ARSDVLLRQLESLHGRELLSRIVIDEA 538
Query: 299 D--KLLSPEFQPSIEQL--IQFLSPNRQILMYSATYPVTVKDFKERYLRKPYVIN-LMDE 353
+F+P + L ++ PN +L +AT +VK E ++ ++N ++
Sbjct: 539 HCVSQWGHDFRPDYQGLGVLKQKFPNTPVLALTATATASVK---EDVVQALGLVNCVVFR 595
Query: 354 LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQ----SIIFCNSVNRVELLAKKITELGY 409
+ +Y+ V + +K CL + ++ N II+C S E +A+K+ E G+
Sbjct: 596 QSFNRPNLWYSVVPKTKK--CLEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQECGH 653
Query: 410 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYL 469
C + H M D R V + + T F GI+ V VI+ PK+ E Y
Sbjct: 654 KCAFYHGSMDPDQRAHVQRQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSVEGYH 713
Query: 470 HRVGRSGRYGHLGLAVNLITYED 492
GR+GR G V +Y D
Sbjct: 714 QECGRAGRDGQRSSCVLYYSYSD 736
>Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like protein
| LC | chr1:1383737-1377649 | 20130731
Length = 400
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 407 LGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAE 466
LG+ I M Q + R + F++G L+C+D ++G+DI AV++VIN++ P+ +
Sbjct: 167 LGFRAIPIMRYMSQAKKLRSLNAFKSGEYNILLCSDFLSKGLDIPAVDMVINYNIPRYPK 226
Query: 467 TYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 518
Y++RVG + H+ +A++ ++ ++R + IE+ +G ++ P ++ +
Sbjct: 227 DYIYRVGWTA--AHVNVAISFVSPDERRHFNMIEKHIGKKLPLYPAPFEEVL 276
>Medtr2g088350.1 | helicase family carboxy-terminal domain protein |
LC | chr2:37222042-37223590 | 20130731
Length = 184
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 442 DLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRY 478
DL GI+IQAVNVVINFDFPKN+ETYLHRVG SGR+
Sbjct: 144 DLSRGGINIQAVNVVINFDFPKNSETYLHRVGWSGRF 180
>Medtr8g018330.1 | eukaryotic translation initiation factor 4A1 | LC
| chr8:6227164-6226359 | 20130731
Length = 177
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 12/161 (7%)
Query: 358 GITQFYAFVE-ERQKVHCLNTLFS----KLQINQSIIFCNSVNRVELLAKKITELGYSCF 412
I QFY V+ E K+ L +F I I+F N++++V+ L ++ + F
Sbjct: 15 SIKQFYVDVDKEEWKLETLCDIFELTLKAKSITHCIVFVNTMDKVDWLMDELRSRDHKVF 74
Query: 413 YIHAKMLQDHRNRVFHDF--RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLH 470
I QD R+ V +F ++ + + L+ TD G D+ ++++N+D P E YLH
Sbjct: 75 VILKFFSQDIRDIVTREFFSQSSSPQVLITTDPQLCGADVHKASLIVNYDLPTVPENYLH 134
Query: 471 RVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIP 511
R+GRS ++ A+N +T ++ + I++ I+++P
Sbjct: 135 RIGRSEKF-----AINFMTEDETSMIIDIQKFYNMVIEELP 170
>Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:34021263-34013553 | 20130731
Length = 313
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 113/266 (42%), Gaps = 49/266 (18%)
Query: 294 VMDEADKLLSPEFQ---PSIEQLIQFLSPNRQILMYSATY-PVTVKDFKER--------Y 341
V+DE D+LL +Q P++ +LIQ S + + SA++ P + + R +
Sbjct: 19 VVDETDRLLREAYQSWLPTVLELIQ--SNDDGFSLPSASFFPCSASALRTRRRCGVERGF 76
Query: 342 LRKPY--------------------VINLMDELTLKGITQFYAFVE--ERQKVHC----- 374
KPY +NL L LK Y E E K+ C
Sbjct: 77 KDKPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLKAGQMRYRLPENLESYKLICEKKVK 136
Query: 375 ---LNTLFSKLQINQSIIFCNSVNRVELLAKKIT---ELGYSCFYIHAKMLQDHRNRVFH 428
L L L + ++F SV+ L + + +L + Q R++ +
Sbjct: 137 PLYLIALLKSLGEEKCLVFTKSVDSTHRLCQLLNCFEDLRIDIKEYSSLQHQRVRSKTLN 196
Query: 429 DFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGLAVNLI 488
+FR G + L+ +D TR +D++ V VIN+D PK +TY+HR GR+ R G L+
Sbjct: 197 EFRKGVFQVLLSSDALTREMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGRCFTLM 256
Query: 489 TYED--RFNLYRIEQELGTEIKQIPP 512
+ ++ RF + E G+ + I P
Sbjct: 257 SEDEVRRFKKLIGKAEGGSCLDHIVP 282
>Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 408 GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAET 467
G+ I + M Q + + ++G C L+C+D ++G+DI AV++VIN++ P +
Sbjct: 27 GFRAIPIISYMSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPND 86
Query: 468 YLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 518
Y++RVG + H+ +A++ ++ ++R + IE+ +G ++ P ++ +
Sbjct: 87 YIYRVGWT--VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYPAPFEEVL 135
>Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 408 GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAET 467
G+ I + M Q + + ++G C L+C+D ++G+DI AV++VIN++ P +
Sbjct: 27 GFRAIPIISYMSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPND 86
Query: 468 YLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 518
Y++RVG + H+ +A++ ++ ++R + IE+ +G ++ P ++ +
Sbjct: 87 YIYRVGWT--VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYPAPFEEVL 135
>Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 408 GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAET 467
G+ I + M Q + + ++G C L+C+D ++G+DI AV++VIN++ P +
Sbjct: 27 GFRAIPIISYMSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPND 86
Query: 468 YLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 518
Y++RVG + H+ +A++ ++ ++R + IE+ +G ++ P ++ +
Sbjct: 87 YIYRVGWT--VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYPAPFEEVL 135
>Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 408 GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAET 467
G+ I + M Q + + ++G C L+C+D ++G+DI AV++VIN++ P +
Sbjct: 27 GFRAIPIISYMSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPND 86
Query: 468 YLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 518
Y++RVG + H+ +A++ ++ ++R + IE+ +G ++ P ++ +
Sbjct: 87 YIYRVGWT--VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYPAPFEEVL 135
>Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 | HC
| chr8:6234340-6233617 | 20130731
Length = 176
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 357 KGITQFYAFVE-ERQKVHCLNTLF-----SKLQINQSIIFCNSVNRVELLAKKITELGYS 410
I QFY V+ E K+ L +F + I I+F N++++V+ L K+ +
Sbjct: 14 SSIKQFYVDVDKEEWKLETLCDIFELTLKAYKSITHCIVFVNTIDKVDWLTDKMRSRDH- 72
Query: 411 CFYIHAKMLQDHRNRVFHDF--RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETY 468
+ IH Q+ + + +F +G+ + L+ TD G D+ ++V+N+D P E Y
Sbjct: 73 -YVIHGDRDQNTMDTIEREFLFESGSPQVLITTDPLVCGTDLHKASLVVNYDLPTVPENY 131
Query: 469 LHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIP 511
L+ +GRSG++ A+N + ++ L I++ I+++P
Sbjct: 132 LNHIGRSGKF-----AINFMIEDEANMLIDIQKFYNMVIEELP 169
>Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC |
chr3:28524625-28534220 | 20130731
Length = 908
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 130/327 (39%), Gaps = 26/327 (7%)
Query: 166 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTR 225
GF P Q E I + D L G+GK+ + +P L V ++ L+ +
Sbjct: 13 GFLSFRPYQREVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQ 72
Query: 226 ELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVC 285
+AL+ + E + V + + DI+ P +L K+G+
Sbjct: 73 VMALKQRGIKAEYLSSAQKDYTVQSKAERGQFDIL-FMTPEKACTIPTSFWSNLLKEGI- 130
Query: 286 ILKDCSMLVMDEADKL--LSPEFQPSIEQLIQFLSPNRQI----LMYSATYPVTVKDFKE 339
S+ +DEA + +F+ +QL + + L +AT V
Sbjct: 131 -----SLFAVDEAHCISEWGHDFRVEYKQLDKLRGVLLDVPYVGLTATATEKVRFDITNS 185
Query: 340 RYLRKPYVI-NLMDELTL-KGITQF---YAFVEERQKVHCLNTLFSKLQIN--QSIIFCN 392
+ PYV+ D L G+ QF +F++E L SK N +II+C
Sbjct: 186 LKMNNPYVVVGSFDRPNLFYGVKQFNRGQSFIDE------LVEEVSKEVANGCSTIIYCT 239
Query: 393 SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQA 452
++ VE + K +TE+G + H +M R F + +V T F GID
Sbjct: 240 TIKDVEQIYKSLTEVGINAGMYHGQMDGKSREESHRLFVRDEMQIMVATIAFGMGIDKPN 299
Query: 453 VNVVINFDFPKNAETYLHRVGRSGRYG 479
+ VI++ PKN E+Y GR GR G
Sbjct: 300 IRKVIHYGCPKNLESYYQESGRCGRDG 326
>Medtr8g079452.1 | helicase family carboxy-terminal domain protein |
HC | chr8:34005644-34004777 | 20130731
Length = 113
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 424 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRYGHLGL 483
++ ++FR G + L+ +D TR +D++ V VIN+D PK +TY+HR GR+ R G
Sbjct: 23 SKTLNEFRKGVFQVLLSSDALTRVMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGR 82
Query: 484 AVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQ 516
L++ ED N Y E G+ I P I Q
Sbjct: 83 CFTLMS-EDEANDY-CNFEWGSLIGTWYPLITQ 113
>Medtr6g040070.1 | DEAD/DEAH-box helicase | HC |
chr6:14397151-14388452 | 20130731
Length = 784
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 12/180 (6%)
Query: 149 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
F++ + EL+ + E G PS IQ IP L G +L + + +T A+ +P ++
Sbjct: 579 FKELGMSDELIEVMEEIGEFVPSEIQCVVIPTILDGKSLLLSSPSQHDRTLAYLLPLIQM 638
Query: 209 IDHDNNVI-------QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMR 261
+ D ++ + V+L + E Q C +++ V + D +
Sbjct: 639 LRRDRELLGSNSKYPRAVVLCASEEKVEQ----CFNAARYIIHNAEVKSAKNRASSDTEK 694
Query: 262 LYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLL-SPEFQPSIEQLIQFLSPN 320
+ L++GTP IL ++G + + LV+DEAD +L S F P I ++I+ L N
Sbjct: 695 SNSSIGLMIGTPYEILQYIEEGTIVPAELKCLVLDEADSMLGSSNFGPEINKIIRPLQHN 754
>Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr5:10949368-10935495 | 20130731
Length = 685
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 134/333 (40%), Gaps = 62/333 (18%)
Query: 174 QEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDHDNNVIQVVILVPTRELALQTSQ 233
Q+E I L+G D+L G GK+ + +PA+ + V LV + L+L Q
Sbjct: 94 QKEIINAILSGRDVLVIMAAGGGKSLCYQLPAVLR--------NGVALVVSPLLSLIQDQ 145
Query: 234 VCKELG-KHLKIQVMVTTGGTSLKDDIM-------RLYQPVHLLVGTPGRILDLAKKGVC 285
V +G L I + T TS ++ + R + LL TP +I K+ +
Sbjct: 146 V---MGLTALGIPAYMLTSTTSKDNEKVYIQSFWRRARGDLKLLYVTPEKITK--KQEIY 200
Query: 286 ILKDCSMLVMDEADKLLSPEFQPSIEQL----IQFLSPNRQILMYSATYPVTVK-DFKE- 339
CS D F+P + L QF PN ++ +AT V+ D E
Sbjct: 201 EAHCCSQWGHD---------FRPDYKNLGILKTQF--PNVPMVALTATATQRVQNDLVEM 249
Query: 340 ----------RYLRKP---YVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQ 386
+ +P Y++ ++ + + F++E H
Sbjct: 250 LHIRRCVKFVSTVNRPNLFYMVKEKSSVSKVVVDEIAEFIQESYPNH-----------ES 298
Query: 387 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 446
I++C S E +AK++ E G S + HA M + R +V + N + +V T F
Sbjct: 299 GIVYCFSRKECEQVAKELRERGISAGHYHADMDVNDREKVHMRWSNNKLQVIVGTVAFGM 358
Query: 447 GIDIQAVNVVINFDFPKNAETYLHRVGRSGRYG 479
GI+ V VI+ K+ ETY GR+GR G
Sbjct: 359 GINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 391