Miyakogusa Predicted Gene
- Lj1g3v2523750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2523750.1 Non Characterized Hit- tr|I1HRK5|I1HRK5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,63.49,1e-18,Ovate,Ovate protein family, C-terminal;
DNA_binding_2,DNA-binding domain, ovate family-like;
A_thal,CUFF.29089.1
(382 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g072630.1 | ovate transcriptional repressor | HC | chr7:27... 301 8e-82
Medtr7g072875.1 | ovate transcriptional repressor | HC | chr7:27... 236 3e-62
Medtr4g028930.1 | ovate transcriptional repressor | HC | chr4:99... 214 1e-55
Medtr5g075210.1 | ovate transcriptional repressor | HC | chr5:31... 136 4e-32
Medtr2g018030.1 | ovate transcriptional repressor | HC | chr2:52... 101 1e-21
Medtr8g087530.1 | ovate transcriptional repressor | HC | chr8:36... 92 6e-19
Medtr4g132740.1 | ovate transcriptional repressor | HC | chr4:55... 73 5e-13
Medtr8g103520.1 | ovate transcriptional repressor | HC | chr8:43... 72 1e-12
Medtr0907s0020.1 | ovate transcriptional repressor | HC | scaffo... 68 1e-11
Medtr4g052040.1 | ovate transcriptional repressor | HC | chr4:18... 65 1e-10
Medtr7g105790.1 | ovate transcriptional repressor | HC | chr7:42... 64 3e-10
Medtr3g111780.1 | ovate transcriptional repressor | HC | chr3:52... 61 2e-09
Medtr4g052060.1 | ovate transcriptional repressor | HC | chr4:18... 51 1e-06
Medtr5g079710.1 | ovate transcriptional repressor | HC | chr5:34... 51 2e-06
>Medtr7g072630.1 | ovate transcriptional repressor | HC |
chr7:27064970-27066611 | 20130731
Length = 349
Score = 301 bits (771), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 190/388 (48%), Positives = 227/388 (58%), Gaps = 46/388 (11%)
Query: 1 MGNCRFRLSDMMPNAWFYKLRDMGRAXXXXXXXXXXXXXXXXXVSFPHSSKPKQQPHQCT 60
MGN +F+LSDMMPNAWFYKLRDMGR + ++SK +QPHQ
Sbjct: 1 MGNYKFKLSDMMPNAWFYKLRDMGRTKNQTPTTQQRKKKQSSSSTTSNTSK-SKQPHQSN 59
Query: 61 PRKSYYFTRELNSPNNRIHTSPAKNNQNVQDSNYPEXXXXXXXXXXXXXXXXXXXLVTPS 120
PRKSYYFTRELN NNRI+ + NN +N+P TP
Sbjct: 60 PRKSYYFTRELNQTNNRIYNTSPPNN-----TNFPPEPPRKSSSKQQRPKRR-----TPK 109
Query: 121 SANCSCHNNLXXXXXXXXXXXXXXXXXXNRTDNVLLPTQTVSGSNTCGCKLHCXXXXXXX 180
+++ S ++ RTD VLLPT +
Sbjct: 110 TSSSSPFDSPLDSSAESEELPEPEI----RTDRVLLPTNDI------------------- 146
Query: 181 XXXXXXXSIV--RKDDKLDAYEYDSISQQPVLPPILTKPAKFKDIVVDAKKKETKPRSRI 238
SIV R+DDKL+ EYDS+S+ LPPI+TKP KF ++ AKKKETKPRS+
Sbjct: 147 IIDVDNNSIVETRQDDKLN--EYDSLSELMKLPPIVTKPEKFNYLLNYAKKKETKPRSK- 203
Query: 239 RITAANEEHNVKGSLKVKILKEQQQ---MKTPSRRFSLTSSPGVRIRMNSPRIGSRRVQG 295
++N+EHNVKGS KVKILKE+Q+ KTPSRRFS+ SSPGV++R+NSPRI SR++Q
Sbjct: 204 --NSSNDEHNVKGSPKVKILKEEQRNINTKTPSRRFSV-SSPGVKLRINSPRISSRKIQT 260
Query: 296 HXXXXXXXXX-XXXXXXXXXXXFAIVKSSFDPQRDFRESMVEMIEQNNIRDSKDLEDLLA 354
H FAIVKSS +PQ DFRESMVEMI QNNIR SKDLEDLLA
Sbjct: 261 HGRKSTSSTIISAGNRRSLSDSFAIVKSSLNPQGDFRESMVEMIVQNNIRTSKDLEDLLA 320
Query: 355 CYLSLNSDEYHDLIIKVFKQIWFDLTDN 382
CYLSLNSDEYH+LIIKVFKQIWFDLTDN
Sbjct: 321 CYLSLNSDEYHELIIKVFKQIWFDLTDN 348
>Medtr7g072875.1 | ovate transcriptional repressor | HC |
chr7:27215610-27212091 | 20130731
Length = 287
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/239 (58%), Positives = 161/239 (67%), Gaps = 31/239 (12%)
Query: 150 RTDNVLLPTQTVSGSNTCGCKLHCXXXXXXXXXXXXXXSIV--RKDDKLDAYEYDSISQQ 207
RTD VLLPT + SIV R+DDKL+ EYDS+S+
Sbjct: 73 RTDRVLLPTNDI-------------------IIDVDNNSIVETRQDDKLN--EYDSLSEL 111
Query: 208 PVLPPILTKPAKFKDIVVDAKKKETKPRSRIRITAANEEHNVKGSLKVKILKEQQQ---M 264
LPPI+TKP KF ++ AKKKETKPRS+ ++N+EHNVKGS KVKILKE+Q+
Sbjct: 112 MKLPPIVTKPEKFNYLLNYAKKKETKPRSK---NSSNDEHNVKGSPKVKILKEEQRNINT 168
Query: 265 KTPSRRFSLTSSPGVRIRMNSPRIGSRRVQGHXXXXXXXXX-XXXXXXXXXXXFAIVKSS 323
KTPSRRFS+ SSPGV++R+NSPRI SR++Q H FAIVKSS
Sbjct: 169 KTPSRRFSV-SSPGVKLRINSPRISSRKIQTHGRKSTSSTIISAGNRRSLSDSFAIVKSS 227
Query: 324 FDPQRDFRESMVEMIEQNNIRDSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDN 382
+PQ DFRESMVEMI QNNIR SKDLEDLLACYLSLNSDEYH+LIIKVFKQIWFDLTDN
Sbjct: 228 LNPQGDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHELIIKVFKQIWFDLTDN 286
>Medtr4g028930.1 | ovate transcriptional repressor | HC |
chr4:9950056-9948555 | 20130731
Length = 382
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/411 (39%), Positives = 199/411 (48%), Gaps = 61/411 (14%)
Query: 1 MGNCRFRLSDMMPNAWFYKLRDMGRAXXXXXXXXXXXXXX---XXXVSFPHSSKPKQQPH 57
M N +F+LSDM+PNAWFYKL+++G+ + HSSKP QP+
Sbjct: 1 MRNNKFKLSDMIPNAWFYKLKEIGKTKNQTSTTPSKKKKQPFSLSSTTSTHSSKP-NQPN 59
Query: 58 QCT-PRKSYYFTRELNSPNNRIHTSPAKNNQNVQDSNYPEXXXXXXXXXXXXXXXXXXXL 116
QC PRKSYYFTRELN N + TSP N +
Sbjct: 60 QCNNPRKSYYFTRELNQNNTKFSTSPK--TPQTPSKNKTRKKRTTTLKSKNSSSSSPKNV 117
Query: 117 VTPSSANCSCHNNLXXXXXXX-------------XXXXXXXXXXXNRTDNVLLPTQ---- 159
+ SA CSC L RTD VL+PT+
Sbjct: 118 TSSVSAGCSCRTTLESVWTKSDSPHENFSSSPLDSLTESESPDPEFRTDRVLIPTEPSFD 177
Query: 160 -TVS-GSNTCGC-KLHCXXXXXXXXXXXXXXSIVRKDDKLDAYEY--DSISQQPVLPPIL 214
VS +++C C K+ S+ RKDDKL+ Y+Y DS S+ LPPI+
Sbjct: 178 EMVSLTTSSCACNKISNNNNNIDIVIDVDKNSLARKDDKLEGYDYSYDSFSKLE-LPPII 236
Query: 215 TKPAKFKDIVVDAKKKETKPRSRIRITAANEEHNVKG-SLKVKIL-KEQQQMKTPSRRFS 272
TKP T NE +K SLK+KI+ +EQ + K ++
Sbjct: 237 TKP-----------------------TMKNEHKPIKEESLKIKIINQEQHKKKNKKKKNG 273
Query: 273 LTSSPGVRIRMNSPRIGSRRVQGHXXXXXXXXXXXXXX--XXXXXXFAIVKSSFDPQRDF 330
+SPGV++R+ SPRI VQ H AIVKSSF+PQ+DF
Sbjct: 274 SVNSPGVKLRIKSPRI----VQFHHVRKSVSSTVTSSGYRRSFSGSLAIVKSSFNPQKDF 329
Query: 331 RESMVEMIEQNNIRDSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTD 381
RESMVEMI +NNIR SKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLT+
Sbjct: 330 RESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTE 380
>Medtr5g075210.1 | ovate transcriptional repressor | HC |
chr5:31944483-31945634 | 20130731
Length = 349
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 112/180 (62%), Gaps = 15/180 (8%)
Query: 201 YDSISQQPVLPPILTKPAKFKDIVVDAKKKETKPRSRIRITAANEEHNVKGSLKVKILKE 260
+D+ SQ L PILTK KF++ + K T+ RS + ++E + S K+ +
Sbjct: 181 FDAFSQLG-LAPILTKQVKFEEKIA----KVTESRS----STESDERKIDHSFSTKVTQR 231
Query: 261 QQQMKTPSRRFSLTSSPGVRIRMNSPRIGSRRVQGHXXXXXXXXXXXXXXXXXXXXFAIV 320
+++ +R+ S +S G+++R+NSP+I S+++Q FA+V
Sbjct: 232 RRRKSQIARKTS-PNSQGIKLRVNSPKIVSKKIQA-----CARKSISKNDAGFVDGFAVV 285
Query: 321 KSSFDPQRDFRESMVEMIEQNNIRDSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLT 380
KSS DP DF+ESMVEMI +NNIR+SKDLEDLLACYLSLNS EYHD+I+K F+QIW+D+
Sbjct: 286 KSSIDPISDFKESMVEMIVENNIRESKDLEDLLACYLSLNSSEYHDVIVKAFEQIWYDMA 345
>Medtr2g018030.1 | ovate transcriptional repressor | HC |
chr2:5293973-5295046 | 20130731
Length = 357
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 58/64 (90%)
Query: 317 FAIVKSSFDPQRDFRESMVEMIEQNNIRDSKDLEDLLACYLSLNSDEYHDLIIKVFKQIW 376
FA++K S +P++DFR+SM+EMIE+ I ++++E+LLACYL+LN+DEYHDLIIKVF+Q+W
Sbjct: 279 FAVIKCSSNPKQDFRDSMIEMIEEKQISKAEEMEELLACYLTLNADEYHDLIIKVFRQVW 338
Query: 377 FDLT 380
FD++
Sbjct: 339 FDIS 342
>Medtr8g087530.1 | ovate transcriptional repressor | HC |
chr8:36170112-36171131 | 20130731
Length = 339
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 55/64 (85%)
Query: 317 FAIVKSSFDPQRDFRESMVEMIEQNNIRDSKDLEDLLACYLSLNSDEYHDLIIKVFKQIW 376
FA+VK S DPQ+DFR+SM+EMI++ +I +++E+LLACYLSLNS+E+HD+IIK F+Q+W
Sbjct: 260 FAVVKCSLDPQQDFRDSMIEMIKEKHISQPEEMEELLACYLSLNSNEFHDIIIKAFRQVW 319
Query: 377 FDLT 380
++
Sbjct: 320 LCMS 323
>Medtr4g132740.1 | ovate transcriptional repressor | HC |
chr4:55507494-55508318 | 20130731
Length = 150
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 47/63 (74%)
Query: 317 FAIVKSSFDPQRDFRESMVEMIEQNNIRDSKDLEDLLACYLSLNSDEYHDLIIKVFKQIW 376
A K S+DP+ DFRESM+EMI N ++D+KDL LL Y+S+NS+EYH LI+++F ++
Sbjct: 83 LATEKCSYDPREDFRESMMEMITVNRLQDAKDLRSLLNYYMSMNSEEYHSLILEIFHEVC 142
Query: 377 FDL 379
+L
Sbjct: 143 TNL 145
>Medtr8g103520.1 | ovate transcriptional repressor | HC |
chr8:43556753-43557634 | 20130731
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%)
Query: 317 FAIVKSSFDPQRDFRESMVEMIEQNNIRDSKDLEDLLACYLSLNSDEYHDLIIKVFKQIW 376
FA+VK S DP DFR SMVEMI + I +LE+LL C+LSLNS +H +I++V+ +IW
Sbjct: 226 FAVVKRSSDPYNDFRTSMVEMIVEKQIFSPSELENLLQCFLSLNSHHHHKIIVEVYTEIW 285
>Medtr0907s0020.1 | ovate transcriptional repressor | HC |
scaffold0907:3445-2806 | 20130731
Length = 182
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 318 AIVKSSFDPQRDFRESMVEMIEQNNIRDSKDLEDLLACYLSLNSDEYHDLIIKVFKQIW 376
A+ K S DP DFR SM++MI +N I DL +LL C+L LNS E+H +II+ F +IW
Sbjct: 105 AVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSKEHHGIIIRAFTEIW 163
>Medtr4g052040.1 | ovate transcriptional repressor | HC |
chr4:18829097-18830158 | 20130731
Length = 177
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 318 AIVKSSFDPQRDFRESMVEMIEQNNIRDSKDLEDLLACYLSLNSDEYHDLIIKVFKQI 375
A+ K S DP DF+ SM++MI +N I DL+DLL C+L LNS YH +I+KVF I
Sbjct: 102 AVEKDSEDPYHDFKHSMLQMIFENEIDSEDDLQDLLRCFLHLNSSCYHGVIVKVFNDI 159
>Medtr7g105790.1 | ovate transcriptional repressor | HC |
chr7:42946436-42945242 | 20130731
Length = 199
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 318 AIVKSSFDPQRDFRESMVEMIEQNNIRDSKDLEDLLACYLSLNSDEYHDLIIKVFKQIW 376
A+ K S DP DFR SM++MI +N I DL +LL C+L LN+ +H +I++ F +IW
Sbjct: 113 AVEKDSEDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNAPYHHGVIVRAFTEIW 171
>Medtr3g111780.1 | ovate transcriptional repressor | HC |
chr3:52290522-52289425 | 20130731
Length = 284
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 47/60 (78%)
Query: 317 FAIVKSSFDPQRDFRESMVEMIEQNNIRDSKDLEDLLACYLSLNSDEYHDLIIKVFKQIW 376
FA+VK S DP DF++SM+EMIE+ + ++KDLE LL C+L+LNS +YH +I++ F +IW
Sbjct: 200 FALVKKSKDPYEDFKKSMLEMIEEMEMSEAKDLEQLLQCFLALNSRDYHGVIVRAFMEIW 259
>Medtr4g052060.1 | ovate transcriptional repressor | HC |
chr4:18838062-18837514 | 20130731
Length = 182
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 318 AIVKSSFDPQRDFRESMVEMIEQNNIRDSKDLEDLLACYLSLNSDEYHDLIIKVFKQI 375
+ K S +P DF+ SM++MI ++ I DL LL C+L LN YH +I+KVF I
Sbjct: 96 VVEKDSDNPYHDFKHSMLQMIFEDEIDSEDDLRVLLRCFLHLNDTCYHLVIVKVFNDI 153
>Medtr5g079710.1 | ovate transcriptional repressor | HC |
chr5:34085549-34083230 | 20130731
Length = 256
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 318 AIVKSSFDPQRDFRESMVEMIEQNNIRDSKDLEDLLACYLSLNSDEYHDLIIKVFKQ 374
A+ K S +P DFR S+++MI + I DL++LL C+L LN+ +H +I++ F +
Sbjct: 94 AVEKESKEPYEDFRNSILQMILEREIYSENDLQELLECFLQLNAKCHHHVIVEAFME 150