Miyakogusa Predicted Gene

Lj1g3v2448110.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2448110.2 tr|F2EJ57|F2EJ57_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,50.49,2e-16,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; seg,NULL; DUF827,Protein of unkno,CUFF.29035.2
         (208 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g072550.1 | WEB family plant protein | HC | chr7:26985106-...   225   2e-59
Medtr4g029090.1 | WEB family plant protein | HC | chr4:10031265-...   169   2e-42
Medtr3g072350.2 | WEB family plant protein | HC | chr3:32503779-...   126   1e-29
Medtr3g072350.1 | WEB family plant protein | HC | chr3:32503656-...   126   1e-29
Medtr5g083980.1 | WEB family plant protein | HC | chr5:36248011-...   117   8e-27
Medtr1g019490.2 | WEAK movement UNDER BLUE LIGHT-like protein | ...    58   5e-09
Medtr1g019490.4 | WEAK movement UNDER BLUE LIGHT-like protein | ...    58   5e-09
Medtr1g019490.1 | WEAK movement UNDER BLUE LIGHT-like protein | ...    58   5e-09
Medtr1g019490.3 | WEAK movement UNDER BLUE LIGHT-like protein | ...    58   5e-09
Medtr3g101660.4 | WEAK movement UNDER BLUE LIGHT-like protein | ...    56   2e-08
Medtr3g101660.2 | WEAK movement UNDER BLUE LIGHT-like protein | ...    56   2e-08
Medtr3g101660.3 | WEAK movement UNDER BLUE LIGHT-like protein | ...    56   2e-08
Medtr3g101660.1 | WEAK movement UNDER BLUE LIGHT-like protein | ...    56   2e-08

>Medtr7g072550.1 | WEB family plant protein | HC |
           chr7:26985106-26988340 | 20130731
          Length = 570

 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/207 (61%), Positives = 143/207 (69%), Gaps = 12/207 (5%)

Query: 10  VVKTTTNRADPGKQS--------FRTEIDTSAPFESVKEAVTMFGGVGYWKPSSNVITCV 61
           V+KTT+ +A+PG  S        FRTEIDTSAPFESVKEAV +FGGVGYWKP  N +  +
Sbjct: 5   VMKTTSYQAEPGSSSKNNKKMDSFRTEIDTSAPFESVKEAVNLFGGVGYWKPFHN-LPSL 63

Query: 62  GSNSKHRIEELDGEKLEEQAAAMEKELILKERETLDVLKELESTKRLVEDXXXXXXXXXX 121
            S+SKH IEELD EKLEEQA A+EKELILKERETLDVLKELE TKRLVED          
Sbjct: 64  TSHSKHHIEELDREKLEEQARALEKELILKERETLDVLKELEKTKRLVEDLKSKLQKEES 123

Query: 122 XXXXXXXMNVSDQRSIAXXXXXXXNQESQLDVLQHSKEGFIPNHSMLSSAPGLILMELNQ 181
                  M+V DQR I        NQ S  +VLQ  KE  +P+     S+P LILMEL Q
Sbjct: 124 ETILNLGMSVCDQRLIVEEKEVKENQSSPSEVLQPMKECSMPSR---VSSPDLILMELKQ 180

Query: 182 AKLNLTKTTNDLADVRAAVESLNKKLE 208
           AKLNLTKTT+D+ADVRA VESLNKKLE
Sbjct: 181 AKLNLTKTTHDIADVRATVESLNKKLE 207


>Medtr4g029090.1 | WEB family plant protein | HC |
           chr4:10031265-10028211 | 20130731
          Length = 554

 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/201 (51%), Positives = 125/201 (62%), Gaps = 23/201 (11%)

Query: 16  NRADPGKQ--SFRTEIDTSAPFESVKEAVTMFGGVGYWKP-----SSNVITCVGSNSKHR 68
           NR +PG +    R EIDTSAPFESVKEAVT FGGVGYWKP     +SN I  +    ++ 
Sbjct: 10  NRVEPGSKENGLRAEIDTSAPFESVKEAVTRFGGVGYWKPVLNHNNSNAINLIIPQQQN- 68

Query: 69  IEELDGEKLEEQAAAMEKELILKERETLDVLKELESTKRLVED-XXXXXXXXXXXXXXXX 127
            EELD  KLEEQA  +EKELI+KERETLDVLKELESTKRLVE+                 
Sbjct: 69  TEELDAGKLEEQAVKLEKELIIKERETLDVLKELESTKRLVENLKSKLQAEEESEANLNI 128

Query: 128 XMNVSDQRSIAXXXXXXXNQESQLDVLQHSKEGFIPNHSMLSSAPGLILMELNQAKLNLT 187
            +N+ D +          N  S+           +P++   S++PGLIL EL QAKLNL 
Sbjct: 129 KLNLCDDKENEKKEEEKENHGSR-----------VPSN---SASPGLILRELKQAKLNLN 174

Query: 188 KTTNDLADVRAAVESLNKKLE 208
           +TTND+ADVR +VESLNKKL+
Sbjct: 175 RTTNDIADVRVSVESLNKKLQ 195


>Medtr3g072350.2 | WEB family plant protein | HC |
           chr3:32503779-32500280 | 20130731
          Length = 508

 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/207 (40%), Positives = 123/207 (59%), Gaps = 20/207 (9%)

Query: 3   AADTGSAVVKTTTNRADPGKQSFRTEIDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVG 62
            ADT S + K           ++R EIDTS PFESVKEAVT FGG G W P    +  +G
Sbjct: 10  GADTESGIRKV----------NYRAEIDTSPPFESVKEAVTRFGGSGPWIP----LYRLG 55

Query: 63  SNSKHRIEELDGEKLEEQAAAMEKELILKERETLDVLKELESTKRLVEDXXXXXXXXXXX 122
             + +  ++ D +K+EEQAA +EK+LI+KE ETLDVL+EL +TKR+VED           
Sbjct: 56  E-AFNNFDDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEALK 114

Query: 123 XXXXXXMNVSDQRSIAXXXXXXXNQESQLDVLQHSKE--GFIPNHSMLSSAPGLILMELN 180
                 +N ++Q  +        N+E+  + + +++E    IP+   +SS P +ILM+L 
Sbjct: 115 LSATPDLNSNEQ--VGTPVIKEMNKETNGNNVNNNQEQTSHIPSSCSMSS-PDMILMDLK 171

Query: 181 QAKLNLTKTTNDLADVRAAVESLNKKL 207
           QAK+NL  T N+L  ++++VESLN+K+
Sbjct: 172 QAKVNLGNTMNELEAIQSSVESLNEKM 198


>Medtr3g072350.1 | WEB family plant protein | HC |
           chr3:32503656-32500285 | 20130731
          Length = 579

 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 120/207 (57%), Gaps = 20/207 (9%)

Query: 3   AADTGSAVVKTTTNRADPGKQSFRTEIDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVG 62
            ADT S + K           ++R EIDTS PFESVKEAVT FGG G W P   +     
Sbjct: 10  GADTESGIRKV----------NYRAEIDTSPPFESVKEAVTRFGGSGPWIPLYRLGEAFN 59

Query: 63  SNSKHRIEELDGEKLEEQAAAMEKELILKERETLDVLKELESTKRLVEDXXXXXXXXXXX 122
           +      ++ D +K+EEQAA +EK+LI+KE ETLDVL+EL +TKR+VED           
Sbjct: 60  N-----FDDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEALK 114

Query: 123 XXXXXXMNVSDQRSIAXXXXXXXNQESQLDVLQHSKE--GFIPNHSMLSSAPGLILMELN 180
                 +N ++Q  +        N+E+  + + +++E    IP+   +SS P +ILM+L 
Sbjct: 115 LSATPDLNSNEQ--VGTPVIKEMNKETNGNNVNNNQEQTSHIPSSCSMSS-PDMILMDLK 171

Query: 181 QAKLNLTKTTNDLADVRAAVESLNKKL 207
           QAK+NL  T N+L  ++++VESLN+K+
Sbjct: 172 QAKVNLGNTMNELEAIQSSVESLNEKM 198


>Medtr5g083980.1 | WEB family plant protein | HC |
           chr5:36248011-36251401 | 20130731
          Length = 535

 Score =  117 bits (293), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 105/188 (55%), Gaps = 24/188 (12%)

Query: 24  SFRTEIDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAA 83
           S R E+DTS PFESVKEAVT FGG G W P   +     S     IE+ D +K+EEQAA 
Sbjct: 27  SSRAEVDTSMPFESVKEAVTRFGGSGPWLPLYKLGEAYNS-----IEDFDIKKIEEQAAK 81

Query: 84  MEKELILKERETLDVLKELESTKRLVEDXXXXXXXXXXXXXXXXXMNVSDQRSIAXXXXX 143
           +EK+LI+KE ETLDVL+EL S K ++E                  +  +  +S       
Sbjct: 82  LEKDLIMKELETLDVLEELGSAKTILE--------KLKQQLQSEALKCASTQSCENIGAL 133

Query: 144 XXNQES----QLDVLQHSKEGFIPNHSMLSSAPGLILMELNQAKLNLTKTTNDLADVRAA 199
             N E     Q  +LQ S     P H   +S+P ++L EL +AK+NL KT NDL  ++++
Sbjct: 134 VKNSEKIVHRQEKILQISS----PCH---TSSPNMLLTELKEAKMNLGKTINDLGTIQSS 186

Query: 200 VESLNKKL 207
           VE+LNKK+
Sbjct: 187 VETLNKKM 194


>Medtr1g019490.2 | WEAK movement UNDER BLUE LIGHT-like protein | HC
           | chr1:5891626-5887207 | 20130731
          Length = 919

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 5/83 (6%)

Query: 29  IDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKEL 88
           IDT+APFESVKEAV+ FGG+  WK    +       SK   ++L  EKL E+     K  
Sbjct: 274 IDTAAPFESVKEAVSKFGGIVDWKAHRMIAV---ERSKEVEQQL--EKLYEEIPEYRKRS 328

Query: 89  ILKERETLDVLKELESTKRLVED 111
              E+E + VL+EL+S KRL+E+
Sbjct: 329 EDSEQEKVQVLQELDSAKRLIEE 351


>Medtr1g019490.4 | WEAK movement UNDER BLUE LIGHT-like protein | HC
           | chr1:5891626-5887207 | 20130731
          Length = 919

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 5/83 (6%)

Query: 29  IDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKEL 88
           IDT+APFESVKEAV+ FGG+  WK    +       SK   ++L  EKL E+     K  
Sbjct: 274 IDTAAPFESVKEAVSKFGGIVDWKAHRMIAV---ERSKEVEQQL--EKLYEEIPEYRKRS 328

Query: 89  ILKERETLDVLKELESTKRLVED 111
              E+E + VL+EL+S KRL+E+
Sbjct: 329 EDSEQEKVQVLQELDSAKRLIEE 351


>Medtr1g019490.1 | WEAK movement UNDER BLUE LIGHT-like protein | HC
           | chr1:5891628-5887207 | 20130731
          Length = 919

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 5/83 (6%)

Query: 29  IDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKEL 88
           IDT+APFESVKEAV+ FGG+  WK    +       SK   ++L  EKL E+     K  
Sbjct: 274 IDTAAPFESVKEAVSKFGGIVDWKAHRMIAV---ERSKEVEQQL--EKLYEEIPEYRKRS 328

Query: 89  ILKERETLDVLKELESTKRLVED 111
              E+E + VL+EL+S KRL+E+
Sbjct: 329 EDSEQEKVQVLQELDSAKRLIEE 351


>Medtr1g019490.3 | WEAK movement UNDER BLUE LIGHT-like protein | HC
           | chr1:5891626-5887207 | 20130731
          Length = 919

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 5/83 (6%)

Query: 29  IDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKEL 88
           IDT+APFESVKEAV+ FGG+  WK    +       SK   ++L  EKL E+     K  
Sbjct: 274 IDTAAPFESVKEAVSKFGGIVDWKAHRMIAV---ERSKEVEQQL--EKLYEEIPEYRKRS 328

Query: 89  ILKERETLDVLKELESTKRLVED 111
              E+E + VL+EL+S KRL+E+
Sbjct: 329 EDSEQEKVQVLQELDSAKRLIEE 351


>Medtr3g101660.4 | WEAK movement UNDER BLUE LIGHT-like protein | HC
           | chr3:46801202-46807927 | 20130731
          Length = 947

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 21/91 (23%)

Query: 29  IDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKEL 88
           IDT+ PFESVKEAV+ FGG+  WK              HRI+ ++   L EQ      E 
Sbjct: 291 IDTTPPFESVKEAVSKFGGIVDWKA-------------HRIQTVERRNLVEQELDKANEE 337

Query: 89  I---LKERETLD-----VLKELESTKRLVED 111
           I    K+ ET +     VLKEL+STKRL+E+
Sbjct: 338 IPEYRKQAETAEQTKNQVLKELDSTKRLIEE 368


>Medtr3g101660.2 | WEAK movement UNDER BLUE LIGHT-like protein | HC
           | chr3:46801202-46807343 | 20130731
          Length = 947

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 21/91 (23%)

Query: 29  IDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKEL 88
           IDT+ PFESVKEAV+ FGG+  WK              HRI+ ++   L EQ      E 
Sbjct: 291 IDTTPPFESVKEAVSKFGGIVDWKA-------------HRIQTVERRNLVEQELDKANEE 337

Query: 89  I---LKERETLD-----VLKELESTKRLVED 111
           I    K+ ET +     VLKEL+STKRL+E+
Sbjct: 338 IPEYRKQAETAEQTKNQVLKELDSTKRLIEE 368


>Medtr3g101660.3 | WEAK movement UNDER BLUE LIGHT-like protein | HC
           | chr3:46801202-46807343 | 20130731
          Length = 947

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 21/91 (23%)

Query: 29  IDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKEL 88
           IDT+ PFESVKEAV+ FGG+  WK              HRI+ ++   L EQ      E 
Sbjct: 291 IDTTPPFESVKEAVSKFGGIVDWKA-------------HRIQTVERRNLVEQELDKANEE 337

Query: 89  I---LKERETLD-----VLKELESTKRLVED 111
           I    K+ ET +     VLKEL+STKRL+E+
Sbjct: 338 IPEYRKQAETAEQTKNQVLKELDSTKRLIEE 368


>Medtr3g101660.1 | WEAK movement UNDER BLUE LIGHT-like protein | HC
           | chr3:46801155-46807902 | 20130731
          Length = 947

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 21/91 (23%)

Query: 29  IDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKEL 88
           IDT+ PFESVKEAV+ FGG+  WK              HRI+ ++   L EQ      E 
Sbjct: 291 IDTTPPFESVKEAVSKFGGIVDWKA-------------HRIQTVERRNLVEQELDKANEE 337

Query: 89  I---LKERETLD-----VLKELESTKRLVED 111
           I    K+ ET +     VLKEL+STKRL+E+
Sbjct: 338 IPEYRKQAETAEQTKNQVLKELDSTKRLIEE 368