Miyakogusa Predicted Gene
- Lj1g3v2416500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2416500.1 tr|G7JDC6|G7JDC6_MEDTR TMV resistance protein N
OS=Medicago truncatula GN=MTR_4g023400 PE=4 SV=1,60,0.00004,
,NODE_81081_length_230_cov_21.200001.path5.1
(42 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g015405.1 | disease resistance protein (TIR-NBS-LRR class)... 59 1e-09
Medtr6g015505.1 | disease resistance protein (TIR-NBS-LRR class)... 57 4e-09
Medtr6g016000.1 | disease resistance protein (TIR-NBS-LRR class)... 52 9e-08
Medtr4g023400.1 | disease resistance protein (TIR-NBS-LRR class)... 52 9e-08
Medtr6g016000.2 | disease resistance protein (TIR-NBS-LRR class)... 52 9e-08
Medtr4g015030.1 | disease resistance protein (TIR-NBS-LRR class)... 51 3e-07
Medtr4g015030.2 | disease resistance protein (TIR-NBS-LRR class)... 51 3e-07
Medtr4g014570.1 | disease resistance protein (TIR-NBS-LRR class)... 50 4e-07
Medtr4g014570.2 | disease resistance protein (TIR-NBS-LRR class)... 50 4e-07
Medtr6g015455.1 | disease resistance protein (TIR-NBS-LRR class)... 50 4e-07
Medtr6g015595.1 | hypothetical protein | LC | chr6:5279482-52802... 48 2e-06
Medtr4g014990.2 | disease resistance protein (TIR-NBS-LRR class)... 48 2e-06
Medtr4g014990.1 | disease resistance protein (TIR-NBS-LRR class)... 48 2e-06
>Medtr6g015405.1 | disease resistance protein (TIR-NBS-LRR class) | LC
| chr6:5070929-5064885 | 20130731
Length = 1138
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 33/44 (75%), Gaps = 3/44 (6%)
Query: 2 VVVFENGFTVKKTTVYLVYDE---EKMEPCNAPYKNEIVFGGDE 42
VVVFENGF VK+TTVYL+YDE EK E C+A KN IV GDE
Sbjct: 1034 VVVFENGFVVKRTTVYLIYDEPIAEKGEECHAQDKNVIVSSGDE 1077
>Medtr6g015505.1 | disease resistance protein (TIR-NBS-LRR class) |
HC | chr6:5173811-5178578 | 20130731
Length = 917
Score = 57.0 bits (136), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/45 (68%), Positives = 33/45 (73%), Gaps = 5/45 (11%)
Query: 1 MVVVFENGFTVKKTTVYLVYDE---EKMEPCNAPYKNEIVFGGDE 42
+VVVFENGF VKKTTVYLVYDE EKME C + EIV GDE
Sbjct: 808 VVVVFENGFIVKKTTVYLVYDEPIGEKMEQCQE--QEEIVCSGDE 850
>Medtr6g016000.1 | disease resistance protein (TIR-NBS-LRR class) | LC
| chr6:5693431-5688215 | 20130731
Length = 1125
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 32/46 (69%), Gaps = 4/46 (8%)
Query: 1 MVVVFENGFTVKKTTVYLVYDE---EKMEPCNAPYKNEIV-FGGDE 42
+V VFENGF VKKTTVYLVYDE E ME C +N+IV GDE
Sbjct: 1076 VVSVFENGFIVKKTTVYLVYDEPIRENMEQCQEQEENDIVCSSGDE 1121
>Medtr4g023400.1 | disease resistance protein (TIR-NBS-LRR class) | LC
| chr4:7891960-7882332 | 20130731
Length = 1626
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Query: 1 MVVVFENGFTVKKTTVYLVYD---EEKMEPCNAPYKNEIVFGGDE 42
+VVVF N F VKKTT+YLVYD EEK C+ P +N IV GDE
Sbjct: 1501 VVVVFTNEFIVKKTTIYLVYDEPIEEKTNHCHEPDENGIVSSGDE 1545
>Medtr6g016000.2 | disease resistance protein (TIR-NBS-LRR class) | LC
| chr6:5693431-5688215 | 20130731
Length = 1107
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 32/46 (69%), Gaps = 4/46 (8%)
Query: 1 MVVVFENGFTVKKTTVYLVYDE---EKMEPCNAPYKNEIV-FGGDE 42
+V VFENGF VKKTTVYLVYDE E ME C +N+IV GDE
Sbjct: 1058 VVSVFENGFIVKKTTVYLVYDEPIRENMEQCQEQEENDIVCSSGDE 1103
>Medtr4g015030.1 | disease resistance protein (TIR-NBS-LRR class) | HC
| chr4:4332186-4338889 | 20130731
Length = 1116
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 1 MVVVFENGFTVKKTTVYLVYDEEKMEPCNAPYKNEIVFGGDE 42
+VVVF N + V +TTVYL+Y +EK E C+AP +N +V GD+
Sbjct: 1047 IVVVFGNSYIVMRTTVYLIYHDEKFEQCHAPDENVLVESGDK 1088
>Medtr4g015030.2 | disease resistance protein (TIR-NBS-LRR class) | HC
| chr4:4332186-4338958 | 20130731
Length = 1116
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 1 MVVVFENGFTVKKTTVYLVYDEEKMEPCNAPYKNEIVFGGDE 42
+VVVF N + V +TTVYL+Y +EK E C+AP +N +V GD+
Sbjct: 1047 IVVVFGNSYIVMRTTVYLIYHDEKFEQCHAPDENVLVESGDK 1088
>Medtr4g014570.1 | disease resistance protein (TIR-NBS-LRR class) | HC
| chr4:4130085-4120596 | 20130731
Length = 1137
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 32/45 (71%), Gaps = 5/45 (11%)
Query: 1 MVVVFENGFTVKKTTVYLVYDE---EKMEPCNAPYKNEIVFGGDE 42
+VVVF N F V KT+VYL+YDE EK+E C+AP KN V GG E
Sbjct: 1068 IVVVFGNSFIVMKTSVYLIYDEPIGEKIEQCHAPNKN--VVGGAE 1110
>Medtr4g014570.2 | disease resistance protein (TIR-NBS-LRR class) | HC
| chr4:4130119-4120596 | 20130731
Length = 1137
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 32/45 (71%), Gaps = 5/45 (11%)
Query: 1 MVVVFENGFTVKKTTVYLVYDE---EKMEPCNAPYKNEIVFGGDE 42
+VVVF N F V KT+VYL+YDE EK+E C+AP KN V GG E
Sbjct: 1068 IVVVFGNSFIVMKTSVYLIYDEPIGEKIEQCHAPNKN--VVGGAE 1110
>Medtr6g015455.1 | disease resistance protein (TIR-NBS-LRR class),
putative | LC | chr6:5138191-5126272 | 20130731
Length = 1513
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 4/46 (8%)
Query: 1 MVVVFENGFTVKKTTVYLVYDE---EKMEPCNA-PYKNEIVFGGDE 42
+VVVF+NGF VKKT VYL+YDE E M+ C+A YKN V GD+
Sbjct: 1375 IVVVFKNGFIVKKTAVYLIYDEPIGETMKQCHARTYKNVNVCSGDK 1420
>Medtr6g015595.1 | hypothetical protein | LC | chr6:5279482-5280288
| 20130731
Length = 235
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 32/45 (71%), Gaps = 4/45 (8%)
Query: 1 MVVVFENGFTVKKTTVYLVYDE---EKMEPCNAPYKNEIVFGGDE 42
+VVVFENGF VKKTTVYLVYDE EKME + EIV GDE
Sbjct: 106 VVVVFENGFIVKKTTVYLVYDEPIGEKMEQ-YCQEQEEIVCSGDE 149
>Medtr4g014990.2 | disease resistance protein (TIR-NBS-LRR class) | HC
| chr4:4324381-4318012 | 20130731
Length = 1098
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 1 MVVVFENGFTVKKTTVYLVYDE---EKMEPCNAPYKNEIVFGGDE 42
+VVVF N F V KT VYL+YDE E +E C+ P KN +V GDE
Sbjct: 1026 IVVVFGNSFIVMKTAVYLIYDEPVVEILEQCHTPDKNVLVDIGDE 1070
>Medtr4g014990.1 | disease resistance protein (TIR-NBS-LRR class) | HC
| chr4:4324381-4318012 | 20130731
Length = 1098
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 1 MVVVFENGFTVKKTTVYLVYDE---EKMEPCNAPYKNEIVFGGDE 42
+VVVF N F V KT VYL+YDE E +E C+ P KN +V GDE
Sbjct: 1026 IVVVFGNSFIVMKTAVYLIYDEPVVEILEQCHTPDKNVLVDIGDE 1070