Miyakogusa Predicted Gene

Lj1g3v2337900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2337900.1 Non Characterized Hit- tr|B9SI37|B9SI37_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,27.56,3e-16,VARLMGL,NULL; seg,NULL,CUFF.28909.1
         (420 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g015650.1 | ALC-interacting protein | HC | chr4:4717136-47...   346   2e-95
Medtr3g464300.1 | hypothetical protein | HC | chr3:25825954-2582...    57   5e-08

>Medtr4g015650.1 | ALC-interacting protein | HC |
           chr4:4717136-4719337 | 20130731
          Length = 385

 Score =  346 bits (888), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 212/423 (50%), Positives = 269/423 (63%), Gaps = 45/423 (10%)

Query: 1   MAKPENSKSGCFSGFLRVLLCAGSETSPPVYPSEHADEPEVEHQTKDRK-PVHAATTPGV 59
           M K ENS++GCFS F++VLLCA +ETSPPVYPSE+    E  H  KD+       TTPGV
Sbjct: 1   MEKQENSRNGCFSSFIKVLLCARNETSPPVYPSENV---ETIHHKKDKLFDDSITTTPGV 57

Query: 60  VARLMGLDSLPSTKWVVKGATPDLVPRSRSVNFVDYLLEFDPNHLNNHRRVKTSSSFREV 119
           VARLMGLDSLPSTK VV+G T D VPRS+SVNFVDYLLEFD N + +HRRVKTS+SFREV
Sbjct: 58  VARLMGLDSLPSTKRVVQGTTLDSVPRSKSVNFVDYLLEFDKN-MGSHRRVKTSASFREV 116

Query: 120 PALVQRQQKCDIFVLESDYNASKVQEERYNQVESREETGELXXXXXXXXXXXXXXXXXXX 179
           P++V++ +K  +FVL+ D    KVQEE  N    R ++                      
Sbjct: 117 PSMVEK-KKSFLFVLDIDDKKGKVQEE--NDANLRRKS---------------------- 151

Query: 180 IKETAVRERVSVKKERNNQGKSKKISKLKNEPRRVP----SSKQSSKVRNHNEARDFXXX 235
                 +E V VKKE+ NQGK+KKISKLK+EPRRVP    SSK  S+VR+ ++ +DF   
Sbjct: 152 ------KETVRVKKEK-NQGKNKKISKLKDEPRRVPFSSSSSKYKSRVRDCSKDKDFSSV 204

Query: 236 XXXXXXXXCRFNGDCXXXXXXXXXXXX-KRNNKGYVEPKIRNNMRNQQSPKKVEAEHSSE 294
                     + GD               R  KG+VEPK+RN ++   SPKK++ EHS E
Sbjct: 205 STRCNCSYYGYGGDAGSSSSSCSTSSLPNRQKKGFVEPKMRNKVKKHVSPKKIQTEHSME 264

Query: 295 NLSPVSVLDINDYPFLYGAEFLDGTSTIAXXXXXXXXXXXXXXFLEDGVEERKNNDKCLA 354
           NLSPVSVLD+NDY FLYGA+F   TST+                LE+ VEE+ NN+K  A
Sbjct: 265 NLSPVSVLDVNDYAFLYGADF-SVTSTLPLKSKRKSKSLLPVS-LEEDVEEKVNNNKGYA 322

Query: 355 -YTDSNSEAEYFSELMMKVCTLVEKDIRESDCTLKTENFEAICLEFEHKIFDHLLYEVVN 413
            +TD N EAEY+S+LM+K+ +L E+ IRESDCT KT++ E IC+ FE  IFDHL++E +N
Sbjct: 323 PHTDINREAEYYSDLMLKLRSLTEESIRESDCTSKTQSLEEICMVFEQTIFDHLVFEFLN 382

Query: 414 EIV 416
           E+V
Sbjct: 383 EVV 385


>Medtr3g464300.1 | hypothetical protein | HC |
           chr3:25825954-25824350 | 20130731
          Length = 409

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 7/133 (5%)

Query: 5   ENSKSGCFSGFLRVLLCAGSETSPPVYPSEHADEPEVEHQTKDRKPVHAATTPG--VVAR 62
           +++ +GC +  +R +LC+G+        +   D         D     +A TP   +VAR
Sbjct: 29  KSTTTGCLTAIMRKILCSGNLPKDSSNQTTEFDSANSVLSVNDHNLGVSAVTPPPPLVAR 88

Query: 63  LMGLDSLPSTKWVVKGATPDLVPRSRSVNFVDYLLEFDPNHLN-NHRRVKTSSSFREVPA 121
           LMGL+S+    +  K   P  + RS+S+N +DYL E +    + +H+RV ++ SFRE P 
Sbjct: 89  LMGLESMVEVPFASK---PGSLSRSKSMNSLDYLGESNGKIESLHHKRVGSTLSFREPPT 145

Query: 122 LVQRQQKCDIFVL 134
             Q  +    FVL
Sbjct: 146 F-QMSENESFFVL 157