Miyakogusa Predicted Gene
- Lj1g3v2253680.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2253680.1 Non Characterized Hit- tr|I1KZ71|I1KZ71_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38174
PE,33.52,0.0000000000002,seg,NULL; no
description,NULL,gene.g32824.t1.1
(220 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g045170.1 | F-box/RNI/FBD-like domain protein | LC | chr5:... 65 7e-11
Medtr1089s0010.1 | cyclin-like F-box protein | LC | scaffold1089... 64 8e-11
Medtr6g040270.1 | cyclin-like F-box protein | LC | chr6:14439367... 61 7e-10
Medtr3g099830.1 | F-box/RNI/FBD-like domain protein | HC | chr3:... 59 4e-09
Medtr3g099830.2 | F-box/RNI/FBD-like domain protein | HC | chr3:... 59 4e-09
Medtr0009s0080.1 | F-box/RNI/FBD-like domain protein | LC | scaf... 57 1e-08
Medtr2g007550.1 | F-box/RNI/FBD-like domain protein | LC | chr2:... 55 6e-08
Medtr6g022520.1 | FBD protein | LC | chr6:7871434-7872474 | 2013... 55 7e-08
Medtr7g026500.1 | F-box/RNI/FBD-like domain protein | LC | chr7:... 55 7e-08
Medtr7g055943.1 | F-box/RNI/FBD-like domain protein | LC | chr7:... 54 1e-07
Medtr5g007410.1 | F-box/RNI/FBD-like domain protein | LC | chr5:... 53 3e-07
Medtr4g039440.1 | F-box/RNI/FBD-like domain protein | LC | chr4:... 52 5e-07
Medtr5g054920.1 | F-box/RNI/FBD-like domain protein | HC | chr5:... 51 9e-07
Medtr3g026920.1 | F-box/RNI/FBD-like domain protein | LC | chr3:... 51 9e-07
Medtr7g033915.1 | cyclin-like F-box protein | LC | chr7:12485648... 50 2e-06
Medtr7g056420.1 | S-locus lectin kinase family protein | LC | ch... 50 2e-06
Medtr1g053025.1 | F-box/RNI/FBD-like domain protein | LC | chr1:... 50 2e-06
Medtr7g056430.1 | S-locus lectin kinase family protein | LC | ch... 50 2e-06
Medtr5g061680.1 | F-box/RNI superfamily protein | LC | chr5:2561... 50 2e-06
Medtr5g073420.1 | cyclin-like F-box protein | LC | chr5:31261407... 49 3e-06
Medtr1g085120.3 | F-box/RNI/FBD-like domain protein | HC | chr1:... 49 4e-06
Medtr2g008320.1 | F-box/RNI/FBD-like domain protein | LC | chr2:... 49 4e-06
Medtr1g085120.1 | F-box/RNI/FBD-like domain protein | HC | chr1:... 49 4e-06
Medtr1g085120.2 | F-box/RNI/FBD-like domain protein | HC | chr1:... 49 5e-06
Medtr7g056277.1 | F-box/RNI/FBD-like domain protein, putative | ... 48 6e-06
>Medtr5g045170.1 | F-box/RNI/FBD-like domain protein | LC |
chr5:19805236-19807353 | 20130731
Length = 398
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 46/180 (25%)
Query: 14 TIFTCTTLVVLKLQGLTLKELKPFSSVDLPLLKA-SQFLIN------------------- 53
T+F C TLVVL L G+ + L SVDLPLLK + F I+
Sbjct: 136 TVFCCKTLVVLGLTGIHIGTLF-HGSVDLPLLKTLTMFNIHLENIEDFMKLLSGCPILEN 194
Query: 54 -------------------TLPKLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFIYNLH 94
+L KL A+I + F + NV FL++HEM+ NL
Sbjct: 195 LKTRYVKTTTNVTTGGNFKSLSKLNNADIRLFDLPF---RAIYNVRFLRVHEME--TNLA 249
Query: 95 DDEGTEPY-VFPKFHNLTHIELVYRCCANDWLQVVELLKQCPKLRVLVINQELADVATLR 153
++E Y F F NLT ++L + A+DW +VV++L+ CPKL+ L I + + + T +
Sbjct: 250 NEEINLYYKGFSVFENLTDLQLSWCNGAHDWDEVVKMLQNCPKLQTLAIKKWIGSLKTTK 309
>Medtr1089s0010.1 | cyclin-like F-box protein | LC |
scaffold1089:1726-502 | 20130731
Length = 381
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 80/173 (46%), Gaps = 57/173 (32%)
Query: 14 TIFTCTTLVVLKLQGLTLKELKPFSSVDLPLLKASQF-------------LINTLP---- 56
TIFTC TLVVLKL+ L + E++ DLP LK Q L+N P
Sbjct: 130 TIFTCQTLVVLKLEWLQV-EVENLCR-DLPSLKTLQLRFVRFKNKNVLQQLLNASPNLED 187
Query: 57 ------------------------KLVRAEISMRRTRFLLMEVVNNVEFLQIHEM-DFIY 91
KLVRAE+ R + VVNNVEFL +++ D I+
Sbjct: 188 LNAYGTSKHDKNSAPVGVKSLSLAKLVRAEM---RAIDVPYNVVNNVEFLCVYQAEDIIF 244
Query: 92 NLHDDEGTEPYVFPKFHNLTHIELVYRCCANDWLQVVELLKQCPKLRVLVINQ 144
FP F NL HI+L + C + W +V+LL+QCPKL+++ I +
Sbjct: 245 K----------SFPVFRNLIHIKLQFYCFFHGWDGIVQLLQQCPKLQIVFIRK 287
>Medtr6g040270.1 | cyclin-like F-box protein | LC |
chr6:14439367-14438141 | 20130731
Length = 381
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 74/177 (41%), Gaps = 51/177 (28%)
Query: 14 TIFTCTTLVVLKLQGLTLKELKPFSSVDLPLLKA-------------SQFLINTLPKL-- 58
TIFTC TLV+LKL L L F VDLP LK Q L+N P L
Sbjct: 130 TIFTCQTLVILKLDMLQLNAENLF--VDLPKLKTLHLSFVRFKNQNVLQQLLNASPNLED 187
Query: 59 ----------------VRAEISMRRTRFLLME---------VVNNVEFLQIHEMDFIYNL 93
+ SM RF+ E VV NVEFL I
Sbjct: 188 LRTYDILHMEHYENSVLERVKSMSLARFVRTEIGAIDVPYNVVKNVEFLSI--------- 238
Query: 94 HDDEGTEPYVFPKFHNLTHIELVYRCCANDWLQVVELLKQCPKLRVLVINQELADVA 150
+D E FP F NL HI+L + W +V+ L+ CPKL++L IN+ + ++
Sbjct: 239 YDAERIIFKSFPMFQNLIHIKLQFYWFFPGWDGIVQFLQHCPKLQILYINKRSSSLS 295
>Medtr3g099830.1 | F-box/RNI/FBD-like domain protein | HC |
chr3:45811581-45808064 | 20130731
Length = 374
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 15/94 (15%)
Query: 53 NTLPKLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFIYNLHDDEGTEPYVFPKFHNLTH 112
NTL KL RA+I++ F M+ ++N+EFL+I E PY FP F+NLTH
Sbjct: 199 NTLTKLKRADITICYCYFP-MKALSNLEFLRIQL---------SEDYHPYDFPTFNNLTH 248
Query: 113 IELVYRCCANDWLQVVELLKQCPKLRVLVINQEL 146
+ + Y DW VV++L+ CPKL+ L + Q+L
Sbjct: 249 LVVNY-----DWDIVVQVLQHCPKLQSLDLYQKL 277
>Medtr3g099830.2 | F-box/RNI/FBD-like domain protein | HC |
chr3:45811559-45808858 | 20130731
Length = 374
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 15/94 (15%)
Query: 53 NTLPKLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFIYNLHDDEGTEPYVFPKFHNLTH 112
NTL KL RA+I++ F M+ ++N+EFL+I E PY FP F+NLTH
Sbjct: 199 NTLTKLKRADITICYCYFP-MKALSNLEFLRIQL---------SEDYHPYDFPTFNNLTH 248
Query: 113 IELVYRCCANDWLQVVELLKQCPKLRVLVINQEL 146
+ + Y DW VV++L+ CPKL+ L + Q+L
Sbjct: 249 LVVNY-----DWDIVVQVLQHCPKLQSLDLYQKL 277
>Medtr0009s0080.1 | F-box/RNI/FBD-like domain protein | LC |
scaffold0009:39657-41200 | 20130731
Length = 427
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 43/179 (24%)
Query: 14 TIFTCTTLVVLKLQGLTLKELKPFSSVDLPLLKASQF-------------LINTLPKL-- 58
TIF C TLVVLKL L + + F SVDLP LK L++ PKL
Sbjct: 141 TIFVCETLVVLKLDRLNVPSMSRF-SVDLPSLKTLDLCFVCFQNSDDYMKLLSGSPKLED 199
Query: 59 ---VRAEISMRRT----------------RFLLMEV----VNNVEFLQIHEMDFIYNLHD 95
+ ++++R T F L EV V NV+FL + +M L
Sbjct: 200 LKTLYIKLNVRSTAIENFEKPLLSNLIKANFRLFEVPFRAVYNVQFLNVLQMG--TRLPS 257
Query: 96 DEGTEPY-VFPKFHNLTHIELVYRC-CANDWLQVVELLKQCPKLRVLVINQELADVATL 152
+E T Y P F NL + L + +DW +V+++L+ CPKL+ L I + + T+
Sbjct: 258 EENTSYYKSLPIFENLIELRLSWTSRVTHDWSEVMKMLQNCPKLQTLSIKKWWGSITTI 316
>Medtr2g007550.1 | F-box/RNI/FBD-like domain protein | LC |
chr2:1026121-1023951 | 20130731
Length = 347
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 21/137 (15%)
Query: 14 TIFTCTTLVVLKLQGLTLKELKPFSSVDLPLLKASQFLINTLPKLVRAEISMRRTRFLLM 73
IFTC TLV L L+ + L + L K+ F P L+RA+I+ R+ +
Sbjct: 130 AIFTCKTLVSLDLRHFSDDSLT------IELFKSLSF-----PNLIRADITQSMCRYFPL 178
Query: 74 EVVNNVEFLQIHEMDFIYNLHD----DEGTEPY-VFPKFHNLTHIELVYRCCANDWLQVV 128
+ ++ FL + D + PY P FHNLT++EL N W ++
Sbjct: 179 KALSTSNFLCLDTFLLYTQARDVYQVSQPQSPYENIPIFHNLTYLEL-----HNSWHLIL 233
Query: 129 ELLKQCPKLRVLVINQE 145
++L CPKL+ L I +E
Sbjct: 234 QVLHHCPKLQNLKIYEE 250
>Medtr6g022520.1 | FBD protein | LC | chr6:7871434-7872474 |
20130731
Length = 318
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 14/94 (14%)
Query: 54 TLPKLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFIYNLHDDEGTEPYVFPKFHNLTHI 113
TL KLVRA IS L ++NVEFL+I + D E T + P F NL HI
Sbjct: 141 TLSKLVRASISSMDA---LFNGIDNVEFLRITK-----GFKDQEATFIAI-PLFPNLNHI 191
Query: 114 ELVYRCCAND---WLQVVELLKQCPKLRVLVINQ 144
ELV+ C + W + ELL+ CPKL++L+I +
Sbjct: 192 ELVF--CNSSFHCWDGIGELLRHCPKLQILIIKK 223
>Medtr7g026500.1 | F-box/RNI/FBD-like domain protein | LC |
chr7:8792946-8794320 | 20130731
Length = 400
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 54 TLPKLVRAEISMRRTRFLLMEVVNNVEFLQI---HEMDFIYNLHDDEGTEPYVFPKFHNL 110
L KLVRA I F + V ++ LQ+ H +D I + + D FP F L
Sbjct: 219 NLSKLVRASICPFDVPFKAVYNVKSLCILQLDSDHSVDIINSYYKD-------FPVFKKL 271
Query: 111 THIELVYRCCANDWLQVVELLKQCPKLRVLVINQELADVATLR 153
H+E+ +R C +DW + +LLK PKL+ L+I + + T R
Sbjct: 272 IHLEICFRHCDHDWDNLAKLLKHSPKLQTLLIRKRSSSYLTFR 314
>Medtr7g055943.1 | F-box/RNI/FBD-like domain protein | LC |
chr7:19318006-19316445 | 20130731
Length = 432
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 12/99 (12%)
Query: 54 TLPKLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFIYNLHDDEGTEPYVFPKFHNLTHI 113
TL KLVRA I R R ++ +NNV+FL++ ++L+ P F NL +
Sbjct: 245 TLSKLVRASI---RIRDGVVNGINNVKFLRVLICAKAFSLN--------AIPLFENLISM 293
Query: 114 ELVY-RCCANDWLQVVELLKQCPKLRVLVINQELADVAT 151
ELV+ RC W VVELL+ CPKL++L I + + ++
Sbjct: 294 ELVFPRCSYICWDDVVELLRHCPKLQILFIEKRWLNSSS 332
>Medtr5g007410.1 | F-box/RNI/FBD-like domain protein | LC |
chr5:1348975-1346561 | 20130731
Length = 451
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 49/175 (28%)
Query: 14 TIFTCTTLVVLKLQGLTLKELKPFSSVDLPLLK--------------------------- 46
TIF C TLVVLKL+ L + + SSV LP+LK
Sbjct: 148 TIFHCKTLVVLKLKNLRVNTMFR-SSVHLPMLKILCMCSVRFEDKKDLMKLLSGCPQLEN 206
Query: 47 ----ASQFLINT------------LPKLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFI 90
++ L N+ L KL++A+I + F V NVEFL + EM
Sbjct: 207 LKTRYTKALTNSMLKKAKTINFKPLSKLIKAKIHLFDIPF---RAVYNVEFLTVLEMGKF 263
Query: 91 YNLHDDEGTEPYVFPKFHNLTHIELVYRCCA-NDWLQVVELLKQCPKLRVLVINQ 144
+ D + FP F NL ++LV+ A DW ++V++L+ CPKL+ L I++
Sbjct: 264 VSF-DLLNSYYKGFPVFENLIQLQLVWFYDAIYDWGEIVKMLENCPKLQTLSISK 317
>Medtr4g039440.1 | F-box/RNI/FBD-like domain protein | LC |
chr4:14017184-14018901 | 20130731
Length = 417
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 13/134 (9%)
Query: 12 LSTIFTCTTLVVLKLQGLTLKELKPFSSVDLPLLKASQFLINTLPKLVRAEISMRRTRFL 71
++ ++ C L L+++ ++++ L ++P + TL KLVRA I + F
Sbjct: 198 INFLYGCPILEDLQVEDISIRTLTKHYENNVPDVGFKSL---TLAKLVRASIDSKDAHF- 253
Query: 72 LMEVVNNVEFLQIHEMDFIYNLHDDEGTEPYVFPKFHNLTHIELVYRCCA-NDWLQVVEL 130
++NVEFL+I I E ++ P F NL HIELV+ + + W VVEL
Sbjct: 254 --NGIDNVEFLRI-----IKGYGSKEECFEFI-PVFSNLVHIELVFWYHSIHSWDGVVEL 305
Query: 131 LKQCPKLRVLVINQ 144
L+ P+L++L I +
Sbjct: 306 LRHSPRLQILFIKK 319
>Medtr5g054920.1 | F-box/RNI/FBD-like domain protein | HC |
chr5:22620461-22621630 | 20130731
Length = 193
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 54 TLPKLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFIYNLHDDEGTEPYV--FPKFHNLT 111
L LVRA IS F + + NVEFL+I +MD + ++ Y FP F NL
Sbjct: 32 ALSNLVRATISPFDITF---KAIYNVEFLRIIKMD---EIDHNKNINAYYKDFPVFCNLI 85
Query: 112 HIELVYRCCANDWLQVVELLKQCPKLRVLVINQELADVATLR 153
H+E+++ + W V ++L+ PKL++L+I + ++ T R
Sbjct: 86 HLEILFSDYDHSWNNVAKVLQHSPKLQILLIRKRSSNYYTYR 127
>Medtr3g026920.1 | F-box/RNI/FBD-like domain protein | LC |
chr3:8315429-8318001 | 20130731
Length = 408
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 33/155 (21%)
Query: 14 TIFTCTTLVVLKLQGLTLKELKPFSSVDLPLL--------------------------KA 47
TIFTC TLV L L ++K +K + D LL +
Sbjct: 167 TIFTCRTLVSLDLHRFSVKAIKFATKRDFILLLFGCPVLEDLKLFRIYLRRGDDSVAIQH 226
Query: 48 SQFLINTLPKLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFIYNLHD-DEGTEPYV-FP 105
+ L + LPKL+RA+I+ R L++ ++ L++ +++ + PY P
Sbjct: 227 FKTLSSCLPKLIRADITQRVCYRFLLKALSTSNSLRLDTFKLYRSVYQVGQPQPPYDDIP 286
Query: 106 KFHNLTHIELVYRCCANDWLQVVELLKQCPKLRVL 140
F NLT++EL N W VV++L CPKL+ L
Sbjct: 287 IFQNLTNLEL-----CNRWRLVVQVLHHCPKLQNL 316
>Medtr7g033915.1 | cyclin-like F-box protein | LC |
chr7:12485648-12486970 | 20130731
Length = 365
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 30/161 (18%)
Query: 3 HWLLTQPTNLSTIFTCT-TLVVLKLQGLTLKE--LKPFSSV--DLPLL------------ 45
H+L+ LS++F C LVVLKL+ + ++ L+ F+ + P+L
Sbjct: 126 HFLIRLSPTLSSVFNCGRKLVVLKLKTIIVRVAILRDFNKLIEGCPILEELEIPSLLCRF 185
Query: 46 -KASQFLINTLPKLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFIYNLHDDEGTEPYVF 104
K LP LVRA IS + + + N +FL++ + +H
Sbjct: 186 SKDGIGEFKHLPNLVRANISKFVPKSIQFAWICNAKFLRLELRHSEHQVH---------- 235
Query: 105 PKFHNLTHIELVYRC-CANDWLQVVELLKQCPKLRVLVINQ 144
FHNLTH+EL++ W ++E+LK CPKL+ L +++
Sbjct: 236 -AFHNLTHMELIFTSNWRTKWKWLLEMLKNCPKLQNLTLHK 275
>Medtr7g056420.1 | S-locus lectin kinase family protein | LC |
chr7:19934346-19939785 | 20130731
Length = 1106
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 37/156 (23%)
Query: 14 TIFTCTTLVVLKLQGLTLKELKPFSSVDLPLL----------KASQFLIN---------T 54
++F+C TLVVL LQ +T+K+L P+L + ++L++ +
Sbjct: 127 SVFSCRTLVVLHLQWITVKDLSQLLLSGCPILEELHAESLIVRNKEWLVSLNFVRQKFPS 186
Query: 55 LPKLVRAEI---SMRRTRFLLMEVVNNVEFLQIHEMDFIYNLHDDEGTEPYVFPKFHNLT 111
LPKL+ A I S FL + + L+ E+D + +H KF NLT
Sbjct: 187 LPKLITANITKSSHSLALFLALLCRAKSQLLRA-ELDTSHLIH----------LKFRNLT 235
Query: 112 HIELVYR---CCANDWLQVVELLKQCPKLRVLVINQ 144
++EL+ + C +W +++ LK CPKL+ L I+Q
Sbjct: 236 NMELILKHNHCEKWNWW-LLKALKHCPKLQNLTIHQ 270
>Medtr1g053025.1 | F-box/RNI/FBD-like domain protein | LC |
chr1:22054473-22057503 | 20130731
Length = 389
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 30/122 (24%)
Query: 28 GLTLKELKPFSSVDLPLLKASQFLINTLPKLVRAEISMRRTRFLLMEVVNNVEFLQIHEM 87
LT++E+K FS PKL RA+++ + + M+ ++ E+L I
Sbjct: 205 SLTIQEVKSFS----------------FPKLTRAKVTRFWSSYFPMKALSKSEYLCIDAY 248
Query: 88 ---DFIYNLHDDEGTEPYV-FPKFHNLTHIELVYRCCANDWLQVVELLKQCPKLRVLVIN 143
DFIY E +PY P FHNLTH++L + W V ++L CPK++ L +
Sbjct: 249 WFEDFIY-----EVNQPYSNSPIFHNLTHLQL-----RDSWDWVAQVLLHCPKVQHLELY 298
Query: 144 QE 145
Q+
Sbjct: 299 QD 300
>Medtr7g056430.1 | S-locus lectin kinase family protein | LC |
chr7:19965485-19970988 | 20130731
Length = 1159
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 37/156 (23%)
Query: 14 TIFTCTTLVVLKLQGLTLKELKPFSSVDLPLL----------KASQFLIN---------T 54
++F+C TLVVL LQ +T+K+L P+L + ++L++ +
Sbjct: 127 SVFSCRTLVVLHLQWITVKDLSQLLLSGCPILEELHAESLIVRNKEWLVSLNFVRQKFPS 186
Query: 55 LPKLVRAEI---SMRRTRFLLMEVVNNVEFLQIHEMDFIYNLHDDEGTEPYVFPKFHNLT 111
LPKL+ A I S FL + + L+ E+D + +H KF NLT
Sbjct: 187 LPKLITANITKSSHSLALFLALLCRAKSQLLRA-ELDTSHLIH----------LKFRNLT 235
Query: 112 HIELVYR---CCANDWLQVVELLKQCPKLRVLVINQ 144
++EL+ + C +W +++ LK CPKL+ L I+Q
Sbjct: 236 NMELILKHNHCEKWNWW-LLKALKHCPKLQNLTIHQ 270
>Medtr5g061680.1 | F-box/RNI superfamily protein | LC |
chr5:25613253-25614498 | 20130731
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 64/147 (43%), Gaps = 27/147 (18%)
Query: 14 TIFTCTTLVVLKLQGLTLKELKPFSSVDLPLLKASQF-------------LINTLPKLVR 60
TIFT TLVVLKL+ L +K VDLP LK L+N P L
Sbjct: 135 TIFTSKTLVVLKLERLVVKAEN--LCVDLPSLKILSLKEICFTYNKDIMKLLNGCPVLED 192
Query: 61 AEISMRR-TRFLLMEVVNNVEFLQIHEMDFIYNLHDDEGTEPYV--FPKFHNLTHIELVY 117
R TRF VE + LH GT Y P F NL HI+L
Sbjct: 193 LHTFGREYTRF--------VEDNAAEGFKPLSKLHTC-GTRKYFQNHPLFQNLIHIKLWL 243
Query: 118 RCCANDWLQVVELLKQCPKLRVLVINQ 144
+ W VVELL+QCPKL+VL I +
Sbjct: 244 YGFIHGWNGVVELLQQCPKLQVLFIRR 270
>Medtr5g073420.1 | cyclin-like F-box protein | LC |
chr5:31261407-31262670 | 20130731
Length = 384
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 73/171 (42%), Gaps = 49/171 (28%)
Query: 14 TIFTCTTLVVLKLQGLTLKELKPFSSVDLPLLKASQF-------------LINTLP---- 56
TI T TLV+LKL+ L +K VDLP LK L+N P
Sbjct: 137 TILTSQTLVILKLERLVVKAENL--CVDLPSLKILHLVEICFKYKNDFMKLLNGCPVLED 194
Query: 57 ------------------KLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFIYNLHDDEG 98
KLVRA+I+ F + +NN+EFL I E
Sbjct: 195 LHTRVEENNAAEGFKPLSKLVRADINSYDVPF---DAINNLEFLCIRVA--------PEN 243
Query: 99 TEPYVFPKFHNLTHIELVYRCCANDWLQVVELLKQCPKLRVLVINQELADV 149
T + P F NL HI+L + W VVELL+ CPKL+VL + + ++ +
Sbjct: 244 TFKTI-PLFQNLIHIKLWLYDFIHGWDGVVELLQHCPKLQVLFVRRWISSL 293
>Medtr1g085120.3 | F-box/RNI/FBD-like domain protein | HC |
chr1:37999928-37996797 | 20130731
Length = 470
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 54 TLPKLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFIYNLHDDEGTEPYVFPKFHNLTHI 113
TL KL+RA IS + +L +NNVEFL+I ++ V P F NL HI
Sbjct: 386 TLSKLIRARIS---SMDVLFNGINNVEFLRITTES------RNQEASFKVIPVFPNLIHI 436
Query: 114 ELVYRCCAND---WLQVVELLKQCPKLRVLVINQ 144
+LV+ C + W VVELL+ C KL++L I +
Sbjct: 437 DLVF--CHHSFHCWDGVVELLRCCSKLQILSIRK 468
>Medtr2g008320.1 | F-box/RNI/FBD-like domain protein | LC |
chr2:1401961-1404001 | 20130731
Length = 445
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 18 CTTLVVLKLQGLTLKELKPFSSVDLPLLKASQFLINTLPKLVRAEISMRRTRFLLMEVVN 77
C L L+L + FSS L + Q ++L +L +A+I+ F++ + ++
Sbjct: 229 CPLLEDLQLSNIHFDPSARFSS----LYRKQQLRCSSLKRLNKADITDHGCYFMV-KSLS 283
Query: 78 NVEFLQIHEMDFIYNLHDDEGTEPYVFPKFHNLTHIELVYRCCANDWLQVVELLKQCPKL 137
NVEFL+I P FP FHNLTH+ L Y C +V++L CPKL
Sbjct: 284 NVEFLRIQLCK--------GYCPPNDFPTFHNLTHLVLNYNCDI-----IVQVLYHCPKL 330
Query: 138 RVLVINQEL 146
+ L ++L
Sbjct: 331 QNLDFYEDL 339
>Medtr1g085120.1 | F-box/RNI/FBD-like domain protein | HC |
chr1:37998507-37996378 | 20130731
Length = 473
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 54 TLPKLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFIYNLHDDEGTEPYVFPKFHNLTHI 113
TL KL+RA IS + +L +NNVEFL+I ++ V P F NL HI
Sbjct: 299 TLSKLIRARIS---SMDVLFNGINNVEFLRITTES------RNQEASFKVIPVFPNLIHI 349
Query: 114 ELVYRCCAND---WLQVVELLKQCPKLRVLVINQ 144
+LV+ C + W VVELL+ C KL++L I +
Sbjct: 350 DLVF--CHHSFHCWDGVVELLRCCSKLQILSIRK 381
>Medtr1g085120.2 | F-box/RNI/FBD-like domain protein | HC |
chr1:37999928-37996378 | 20130731
Length = 548
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 54 TLPKLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFIYNLHDDEGTEPYVFPKFHNLTHI 113
TL KL+RA IS + +L +NNVEFL+I ++ V P F NL HI
Sbjct: 374 TLSKLIRARIS---SMDVLFNGINNVEFLRITTES------RNQEASFKVIPVFPNLIHI 424
Query: 114 ELVYRCCAND---WLQVVELLKQCPKLRVLVINQ 144
+LV+ C + W VVELL+ C KL++L I +
Sbjct: 425 DLVF--CHHSFHCWDGVVELLRCCSKLQILSIRK 456
>Medtr7g056277.1 | F-box/RNI/FBD-like domain protein, putative | LC
| chr7:19751475-19745288 | 20130731
Length = 628
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 66/195 (33%)
Query: 15 IFTCTTLVVLKLQGLTLKELKPFSSVDLPLLKASQF-------------LINTLP----- 56
IF + LVVLKL+ + + P VD P LK L+N+ P
Sbjct: 385 IFGFSNLVVLKLKAIHVNYFLP---VDFPSLKTLHLNDVFIYEHWFLRELVNSCPILEDF 441
Query: 57 ----------------------KLVRAEISMRRTRFLLMEVVNNVEFLQIHEMDFIYNLH 94
LVRA+IS + + +E +NV+FL++ EM F +
Sbjct: 442 QAKNISIGYWSENYNGRFKRLTNLVRADISDLNSCDVPLEAFSNVQFLRVEEM-FGH--- 497
Query: 95 DDEGTEPYVFPKFHNLTHIELVYRCCANDWLQVVELLKQCPKLRVLVINQELADVATLRL 154
P F NL H+ELV++ DW V +L++ PKLR+LV +E+ +
Sbjct: 498 ---------VPVFRNLNHVELVFQRNV-DWCWVFGVLEKFPKLRILV--REMPQL----- 540
Query: 155 RTLTSPRGYHVVPLV 169
LTS R + +P V
Sbjct: 541 --LTSVRSFISIPSV 553