Miyakogusa Predicted Gene

Lj1g3v1697880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1697880.1 tr|C4T9C1|C4T9C1_LOTJA SLEEPY1a OS=Lotus
japonicus GN=SLY1a PE=2 SV=1,100,4e-17,seg,NULL,CUFF.27690.1
         (104 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g102470.1 | F-box GID2-like protein | HC | chr3:47222449-4...    81   2e-16

>Medtr3g102470.1 | F-box GID2-like protein | HC |
           chr3:47222449-47221292 | 20130731
          Length = 174

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/42 (92%), Positives = 40/42 (95%), Gaps = 1/42 (2%)

Query: 61  WGPIPPPVIRSKPLPRLGKDEVHLSLSLLSIRYYEKMNFNNR 102
           WGPIP  VI+SKPLPRLGKDEVHLSLSLLSIRYYEKMNFNNR
Sbjct: 132 WGPIPQ-VIKSKPLPRLGKDEVHLSLSLLSIRYYEKMNFNNR 172



 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 8/62 (12%)

Query: 1  MKRSLPS--GEDRKMKKVKLAETXXXXXXXXXVCGKIHGPGLGCFDDNLLFEVLKHVDAK 58
          MKRSL S   EDRKMK+VK  E+         VC K    GL  FD+N+LFEVLKHVDA+
Sbjct: 1  MKRSLSSEANEDRKMKRVKEEESEKIDG----VCEK--NRGLASFDENMLFEVLKHVDAR 54

Query: 59 SL 60
          +L
Sbjct: 55 TL 56