Miyakogusa Predicted Gene

Lj1g3v1650140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1650140.1 Non Characterized Hit- tr|D7KXQ9|D7KXQ9_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,75.61,0.00000000002,seg,NULL; SUBFAMILY NOT NAMED,NULL;
THIOREDOXIN-RELATED,Thioredoxin;
Thioredoxin-like,Thioredoxin-li,CUFF.27639.1
         (213 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g101740.1 | thioredoxin | HC | chr3:46836481-46838376 | 20...   270   9e-73
Medtr3g112410.1 | thioredoxin H-type 1 protein | HC | chr3:52668...    59   3e-09
Medtr6g092700.1 | thioredoxin | HC | chr6:34911727-34907245 | 20...    59   4e-09
Medtr5g021180.1 | thioredoxin | HC | chr5:8133780-8136379 | 2013...    55   5e-08
Medtr8g107460.1 | tetratricopeptide domain thioredoxin | HC | ch...    50   1e-06
Medtr1g023140.1 | thioredoxin H-type 1 protein | HC | chr1:73547...    49   3e-06

>Medtr3g101740.1 | thioredoxin | HC | chr3:46836481-46838376 |
           20130731
          Length = 218

 Score =  270 bits (689), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 151/221 (68%), Positives = 166/221 (75%), Gaps = 13/221 (5%)

Query: 1   MPLIAIHTQNHL---SFASIKLLLDPCLHGESRTRISHVPFSLVHNRHSHGKLCLGGINI 57
           M L+ I  QN L   SF S++L  D  L+ + ++RIS++ FSLV N HSH KL LGG  +
Sbjct: 1   MSLVVIQQQNILHTKSFLSVRL--DLYLNKQPQSRISNLVFSLVSN-HSHRKLYLGGTKM 57

Query: 58  EPSIKIRGIRSVAGEYQQ------XXXXXXXXXVCPVECVREFKTDEEFCKILDKAKRAG 111
            P  KIR       E QQ               VCPVECVREFKTD+EF KILDK+K  G
Sbjct: 58  VPINKIRH-SFYPVECQQGLPDEDEDDDDDDDDVCPVECVREFKTDDEFLKILDKSKGTG 116

Query: 112 SLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVIDEYDEESEVAERLRIR 171
           SLVVVDFFRTSCGSCKYIEQGFAKLC+KSG+HD PVIFLKHNVIDEYDEESEVAERLRIR
Sbjct: 117 SLVVVDFFRTSCGSCKYIEQGFAKLCKKSGSHDVPVIFLKHNVIDEYDEESEVAERLRIR 176

Query: 172 AVPLFHFYKDGILLEAFPTRDKARIVEAILKYSSLEAEDIL 212
           AVPLFHFYKDG LLEAFPTRDK RI+ AILKYSSLEAEDIL
Sbjct: 177 AVPLFHFYKDGKLLEAFPTRDKERILAAILKYSSLEAEDIL 217


>Medtr3g112410.1 | thioredoxin H-type 1 protein | HC |
           chr3:52668561-52666226 | 20130731
          Length = 117

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 8/113 (7%)

Query: 96  TDEEFCKILDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVI 155
           T E + + L+K   +  L+VVDF  + CG C++I    A++ +K  N    V FLK +V 
Sbjct: 13  TVEAWKEHLEKGNGSKKLIVVDFTASWCGPCRFIAPILAEIAKKLPN----VTFLKVDV- 67

Query: 156 DEYDEESEVAERLRIRAVPLFHFYKDGILLEAFPTRDKARIVEAILKYSSLEA 208
              DE   VAE   + A+P F F K+G L++      K ++  AI K+++ +A
Sbjct: 68  ---DELKTVAEEWAVDAMPTFLFLKEGKLVDKVVGAQKEQLQAAITKHATTDA 117


>Medtr6g092700.1 | thioredoxin | HC | chr6:34911727-34907245 |
           20130731
          Length = 214

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 13/113 (11%)

Query: 96  TDEEFCKILDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVI 155
           + +EF   L +A+    LV+V+F+ T C SC+ +   F KLCR +  H   +IFLK N  
Sbjct: 82  STQEFLNALSQAE--DRLVIVEFYGTWCASCRAL---FPKLCRTAEEHPE-IIFLKVN-- 133

Query: 156 DEYDEESEVAERLRIRAVPLFHFYKDGI-LLEAFPTR--DKARIVEAILKYSS 205
             +DE   + + L ++ +P FHFY+     LE+F        +I EAILK+++
Sbjct: 134 --FDENKPMCKSLNVKVLPYFHFYRGAEGQLESFSCSLAKFQKIKEAILKHNT 184


>Medtr5g021180.1 | thioredoxin | HC | chr5:8133780-8136379 |
           20130731
          Length = 120

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 8/106 (7%)

Query: 98  EEFCKILDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVIDE 157
           + +  IL +   +  L+VVDF  + CG C++I    A+L +K  N     IFLK +V   
Sbjct: 17  DAWNDILHRGNESKKLIVVDFTASWCGPCRFIAPFLAELAKKYTN----AIFLKVDV--- 69

Query: 158 YDEESEVAERLRIRAVPLFHFYKDGILLEAFPTRDKARIVEAILKY 203
            DE   VA+   I A+P F F K+G +L       K  + + I K+
Sbjct: 70  -DELKSVAQDWAIEAMPTFVFVKEGTILGKVVGAKKDELTQTIEKH 114


>Medtr8g107460.1 | tetratricopeptide domain thioredoxin | HC |
           chr8:45433683-45430136 | 20130731
          Length = 364

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 8/101 (7%)

Query: 104 LDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVIDEYDEESE 163
           L  A +   L+V+ F  T CG C+YI   +  L  K       V+FLK ++    DE  +
Sbjct: 269 LSAASKTSRLLVLYFTATWCGPCRYISPLYTSLAEKYQR----VVFLKVDI----DEAVD 320

Query: 164 VAERLRIRAVPLFHFYKDGILLEAFPTRDKARIVEAILKYS 204
           VA R  + +VP F F K+G  +++    DK  +   I ++S
Sbjct: 321 VAARWNVSSVPTFFFVKNGKEVDSVVGADKNTLERKIAQHS 361


>Medtr1g023140.1 | thioredoxin H-type 1 protein | HC |
           chr1:7354715-7352554 | 20130731
          Length = 120

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 8/108 (7%)

Query: 96  TDEEFCKILDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVI 155
           T E++ + + K   +  L+VVDF  + CG C++I    A++ +K       VIFLK ++ 
Sbjct: 13  TVEQWKEEIQKGNDSKKLIVVDFTASWCGPCRFIAPILAEIAKKIPE----VIFLKVDI- 67

Query: 156 DEYDEESEVAERLRIRAVPLFHFYKDGILLEAFPTRDKARIVEAILKY 203
              DE   VA+   + A+P F F K+G  ++      K  +  AI K+
Sbjct: 68  ---DEVKSVAKEWSVEAMPTFLFLKEGKEVDKVVGARKEELENAITKH 112