Miyakogusa Predicted Gene

Lj1g3v1526180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1526180.1 Non Characterized Hit- tr|A5ALW2|A5ALW2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.49,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; DUF659,Domain of unknow,CUFF.27455.1
         (711 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g078930.1 | hypothetical protein | LC | chr7:29889325-2989...    67   7e-11
Medtr7g078980.1 | hypothetical protein | HC | chr7:29902007-2990...    65   2e-10
Medtr3g028350.1 | hypothetical protein | LC | chr3:8989418-89888...    63   9e-10

>Medtr7g078930.1 | hypothetical protein | LC |
           chr7:29889325-29890440 | 20130731
          Length = 129

 Score = 66.6 bits (161), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/55 (60%), Positives = 43/55 (78%)

Query: 287 QRGITLVGFIYSNSSSLNMLMKFTKKIELVRQGVTRFATTVLTLQRLYKQKSNLK 341
           Q GI+L+ +IY+++SSLN++ K T  +ELVR GVTRFATT L LQRL K KS L+
Sbjct: 75  QGGISLLCYIYNHTSSLNLMRKKTINVELVRHGVTRFATTFLMLQRLPKLKSKLR 129


>Medtr7g078980.1 | hypothetical protein | HC |
           chr7:29902007-29902458 | 20130731
          Length = 111

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/55 (60%), Positives = 43/55 (78%)

Query: 287 QRGITLVGFIYSNSSSLNMLMKFTKKIELVRQGVTRFATTVLTLQRLYKQKSNLK 341
           Q GI+L+G+IY+++SSLN++ K T  +ELVR GVT FAT  LTLQRL K KS L+
Sbjct: 57  QGGISLLGYIYNHTSSLNLMRKKTINVELVRHGVTSFATKFLTLQRLPKLKSKLR 111


>Medtr3g028350.1 | hypothetical protein | LC | chr3:8989418-8988833
           | 20130731
          Length = 139

 Score = 63.2 bits (152), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 25/99 (25%)

Query: 361 KRATNIVLMPRFWKDVVYSLKVMGPVAHALRVVCNEKNPGMGHIYQVMNSAKEAIQQSFN 420
           K   N++L   FWKD+V  L+ +             K P M  IY+ M+ AK+       
Sbjct: 32  KALKNMILDKVFWKDIVICLRGI-------------KKPAMRFIYEAMDQAKD------- 71

Query: 421 GNEDEYKDIFAIIDKRWECQLHHPLHAAGYFLNPEFFYG 459
                YK I  IID RW+   H PLH A Y+LNP+  Y 
Sbjct: 72  -----YKPILNIIDDRWDKIFHRPLHVAAYYLNPQLHYA 105