Miyakogusa Predicted Gene

Lj1g3v1355780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1355780.1 Non Characterized Hit- tr|I3T4G7|I3T4G7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.14,0,seg,NULL;
coiled-coil,NULL; SNF7 - RELATED,NULL; Snf7,Snf7,CUFF.27149.1
         (215 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g096680.1 | vacuolar sorting-associated-like protein | HC ...   321   4e-88
Medtr3g096680.3 | vacuolar sorting-associated-like protein | HC ...   308   3e-84
Medtr3g096680.2 | vacuolar sorting-associated-like protein | HC ...   201   3e-52

>Medtr3g096680.1 | vacuolar sorting-associated-like protein | HC |
           chr3:44247076-44243872 | 20130731
          Length = 217

 Score =  321 bits (822), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 169/217 (77%), Positives = 181/217 (83%), Gaps = 2/217 (0%)

Query: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIRXXXXXXXXX 60
           MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIR         
Sbjct: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIREKKKDRALL 60

Query: 61  XXXXXXXXXXXXXQVDAWLLNVEQQLADIELASKQKAVFDSLKAGNDAMKAIQSEINIED 120
                        QVD WL+NVEQQLADIEL SKQKAVF+SLKAG+ A++AIQSEINIED
Sbjct: 61  ALKKKKTQEELLKQVDTWLINVEQQLADIELTSKQKAVFESLKAGSKAIEAIQSEINIED 120

Query: 121 VQKLMDDTEEAKAYQDEISAILGEKLSAEDEEEILAEFDNLETQLTVEDLPEVPASVSEE 180
           VQKLMDDT EAKAYQDEI+AILGE+LSAEDEEEILAEF+NLETQ  VEDLPE P++V ++
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEQLSAEDEEEILAEFENLETQFAVEDLPEAPSTVPDK 180

Query: 181 TDEKLDLPDVPTKAP--ATSSAEVSTKRKVMEEPLAA 215
            DEKLDLPDVPTKAP   TS AEVS KRKVMEEPLAA
Sbjct: 181 VDEKLDLPDVPTKAPVTTTSDAEVSIKRKVMEEPLAA 217


>Medtr3g096680.3 | vacuolar sorting-associated-like protein | HC |
           chr3:44247076-44243872 | 20130731
          Length = 240

 Score =  308 bits (788), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 169/240 (70%), Positives = 181/240 (75%), Gaps = 25/240 (10%)

Query: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQK-----------------------LDA 37
           MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQK                       LDA
Sbjct: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKVTFFNTLNFISLIPFSLCTSNFLLDA 60

Query: 38  VIEAEKQAARDLIRXXXXXXXXXXXXXXXXXXXXXXQVDAWLLNVEQQLADIELASKQKA 97
           VIEAEKQAARDLIR                      QVD WL+NVEQQLADIEL SKQKA
Sbjct: 61  VIEAEKQAARDLIREKKKDRALLALKKKKTQEELLKQVDTWLINVEQQLADIELTSKQKA 120

Query: 98  VFDSLKAGNDAMKAIQSEINIEDVQKLMDDTEEAKAYQDEISAILGEKLSAEDEEEILAE 157
           VF+SLKAG+ A++AIQSEINIEDVQKLMDDT EAKAYQDEI+AILGE+LSAEDEEEILAE
Sbjct: 121 VFESLKAGSKAIEAIQSEINIEDVQKLMDDTAEAKAYQDEINAILGEQLSAEDEEEILAE 180

Query: 158 FDNLETQLTVEDLPEVPASVSEETDEKLDLPDVPTKAP--ATSSAEVSTKRKVMEEPLAA 215
           F+NLETQ  VEDLPE P++V ++ DEKLDLPDVPTKAP   TS AEVS KRKVMEEPLAA
Sbjct: 181 FENLETQFAVEDLPEAPSTVPDKVDEKLDLPDVPTKAPVTTTSDAEVSIKRKVMEEPLAA 240


>Medtr3g096680.2 | vacuolar sorting-associated-like protein | HC |
           chr3:44247076-44243872 | 20130731
          Length = 156

 Score =  201 bits (512), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 105/136 (77%), Positives = 110/136 (80%)

Query: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIRXXXXXXXXX 60
           MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIR         
Sbjct: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIREKKKDRALL 60

Query: 61  XXXXXXXXXXXXXQVDAWLLNVEQQLADIELASKQKAVFDSLKAGNDAMKAIQSEINIED 120
                        QVD WL+NVEQQLADIEL SKQKAVF+SLKAG+ A++AIQSEINIED
Sbjct: 61  ALKKKKTQEELLKQVDTWLINVEQQLADIELTSKQKAVFESLKAGSKAIEAIQSEINIED 120

Query: 121 VQKLMDDTEEAKAYQD 136
           VQKLMDDT EAKAYQD
Sbjct: 121 VQKLMDDTAEAKAYQD 136