Miyakogusa Predicted Gene

Lj1g3v0873000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0873000.1 Non Characterized Hit- tr|I3T9F0|I3T9F0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,74.19,7e-19,
,CUFF.26470.1
         (62 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g088440.1 | NRAMP metal ion transporter 6 | HC | chr3:4014...   102   5e-23
Medtr3g088460.1 | NRAMP metal ion transporter 6 | HC | chr3:4013...   102   9e-23

>Medtr3g088440.1 | NRAMP metal ion transporter 6 | HC |
           chr3:40141672-40136599 | 20130731
          Length = 531

 Score =  102 bits (255), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/62 (74%), Positives = 55/62 (88%)

Query: 1   MAIYILSVIYLIFRKDSVQIYVETKSDPMMQTHVEKGFMNNGQLELSQVPYREDLADIPL 60
           MAIYI SVIYL FRKD+V++++ETK+D +MQ  VEKG ++NGQLELS VPYREDLADIPL
Sbjct: 470 MAIYIASVIYLTFRKDTVEMFIETKNDTVMQNQVEKGIVDNGQLELSHVPYREDLADIPL 529

Query: 61  PE 62
           PE
Sbjct: 530 PE 531


>Medtr3g088460.1 | NRAMP metal ion transporter 6 | HC |
           chr3:40130339-40124722 | 20130731
          Length = 542

 Score =  102 bits (253), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 46/62 (74%), Positives = 52/62 (83%)

Query: 1   MAIYILSVIYLIFRKDSVQIYVETKSDPMMQTHVEKGFMNNGQLELSQVPYREDLADIPL 60
           MA+YI+SVIYL FRKD+V  +VE K DP MQTHVEKGF+N+GQLELS  PYREDLADI  
Sbjct: 477 MALYIVSVIYLTFRKDTVVTFVEVKDDPSMQTHVEKGFVNDGQLELSYTPYREDLADITR 536

Query: 61  PE 62
           PE
Sbjct: 537 PE 538