Miyakogusa Predicted Gene

Lj1g3v0715520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0715520.1 Non Characterized Hit- tr|I0YKX0|I0YKX0_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,36.8,3e-18,seg,NULL,CUFF.26201.1
         (206 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g075110.1 | universal stress family protein | HC | chr8:31...   273   9e-74

>Medtr8g075110.1 | universal stress family protein | HC |
           chr8:31750807-31754475 | 20130731
          Length = 201

 Score =  273 bits (698), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 134/151 (88%), Positives = 140/151 (92%), Gaps = 2/151 (1%)

Query: 56  AKATPQEPEVSAGAAIDAFTQFKHLLLPITDRNPYLSEGTRQAISTTTALAKKYGADITV 115
            KA PQEPEV+   A D+FTQFKHLLLPITDR PYLSEGT+QAI+TT ALA KYGADITV
Sbjct: 53  VKAKPQEPEVAI--ATDSFTQFKHLLLPITDRKPYLSEGTKQAIATTIALANKYGADITV 110

Query: 116 VVIDEQQKESLPEHETQLSSIRWHISEGGFKDYNLLERLGEGSKPTAIIGDVADELNLDL 175
           VVIDEQQKESLPEHETQLSSIRWH+SEGG KDY LLERLG+GSKPTAIIGDVADELNLDL
Sbjct: 111 VVIDEQQKESLPEHETQLSSIRWHLSEGGLKDYKLLERLGDGSKPTAIIGDVADELNLDL 170

Query: 176 VVISMEAIHTKHIDANLLAEFIPCPVMLLPL 206
           VVISMEAIHTKHIDANLLAEFIPCPVMLLPL
Sbjct: 171 VVISMEAIHTKHIDANLLAEFIPCPVMLLPL 201