Miyakogusa Predicted Gene

Lj0g3v0360289.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0360289.2 tr|Q2JMB8|Q2JMB8_SYNJB Hydrolase, alpha/beta fold
family OS=Synechococcus sp. (strain JA-2-3B'a(2-13,44,1e-18,no
description,NULL; seg,NULL; HYDROLASE,NULL; ALPHA/BETA HYDROLASE
FOLD-CONTAINING PROTEIN,NULL; al,CUFF.24805.2
         (394 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g036495.1 | deoxyribodipyrimidine photolyase | HC | chr4:1...   569   e-162
Medtr5g056200.1 | alpha/beta fold hydrolase | HC | chr5:23159941...    96   4e-20
Medtr8g077185.1 | alpha/beta fold hydrolase | HC | chr8:32821042...    94   2e-19
Medtr1g076920.1 | alpha/beta fold hydrolase | HC | chr1:34327795...    86   6e-17
Medtr3g034670.1 | alpha/beta fold hydrolase | HC | chr3:11254961...    68   1e-11

>Medtr4g036495.1 | deoxyribodipyrimidine photolyase | HC |
           chr4:13139480-13145090 | 20130731
          Length = 678

 Score =  569 bits (1467), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 289/382 (75%), Positives = 312/382 (81%)

Query: 1   MELDWGALPVYDDIKELMNKNSWKSGENWKLIKETSAETLLRRDILKXXXXXXXXXXFRQ 60
           MELDWG +PVYDDI   M KN  KS ++W LIKETSAETLL R  LK          FRQ
Sbjct: 205 MELDWGDIPVYDDIMGFMAKNRHKSRDDWNLIKETSAETLLGRKRLKSSENNARSYSFRQ 264

Query: 61  IQSREPNESVFVXXXXXXXXXXXXXXXXXXXXXXXXXEGTARNDWQEVHEKVRSYESRNG 120
           IQS EPNESVFV                         EGTAR+DWQEVHEK+R+ ESRNG
Sbjct: 265 IQSSEPNESVFVTQKGNVVGGGTYNVLNALAAYLRYLEGTARDDWQEVHEKLRASESRNG 324

Query: 121 ASFIGLFGPALSLGIISRRRVYYEAIKYEKERNAGFLSPFGYSAVTIAAAIDAVCSKEWY 180
           ASFI LFGPALSLGIISRRRV+YEAIKYEKERNAGFLSPFGYSA TIAAA++AVCSKEWY
Sbjct: 325 ASFIALFGPALSLGIISRRRVHYEAIKYEKERNAGFLSPFGYSAATIAAAVEAVCSKEWY 384

Query: 181 WLMALRNHLKNDGIHSTRIWRWNGFLVQYTLAGEDGPAVLLVHGFGAFGEHYRDNIHALA 240
           WL+ALRN + NDG  STR+W WNGFLVQYT+AGEDGPAVLLVHGFGAFGEHYRDNIH LA
Sbjct: 385 WLLALRNQINNDGKQSTRVWSWNGFLVQYTIAGEDGPAVLLVHGFGAFGEHYRDNIHGLA 444

Query: 241 GAWNRVWTITLLGFGESEKPNIVYTELLWAELLRDFIVDVVGEPVHLVGNSIGGYFVAIV 300
            A NRVW ITLLGFG+SEKPNIVYTELLWAELLRDFI+DVV +PVHLVGNSIGGY VAIV
Sbjct: 445 RAGNRVWAITLLGFGKSEKPNIVYTELLWAELLRDFIIDVVRDPVHLVGNSIGGYIVAIV 504

Query: 301 ARIWSVLIKSAVLINSAGNIIPTYTSIPLPRVSDRQTSGASWLGSRILLFYLRLRIQEIV 360
           AR+WSVLIKS VLINSAGN+I   +SIPL + SDRQTS ASWLGSRILLFYLRLRIQ+IV
Sbjct: 505 ARVWSVLIKSIVLINSAGNVISRNSSIPLSKPSDRQTSVASWLGSRILLFYLRLRIQDIV 564

Query: 361 KKCYPTKVERADHWLINEMLRA 382
           +KCYPTK+ERAD WLINEMLRA
Sbjct: 565 RKCYPTKIERADDWLINEMLRA 586


>Medtr5g056200.1 | alpha/beta fold hydrolase | HC |
           chr5:23159941-23166405 | 20130731
          Length = 351

 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 9/166 (5%)

Query: 158 SPFGYSAVTIAAAIDAVCSKEWYWLMALRNHLKNDGIH-STRIWRWNGFLVQYTLAGEDG 216
           +PF YS        + V    +   +  +  ++N+ +   T +W W G+ ++Y  +G +G
Sbjct: 16  TPFPYSKFRSPQPNNVVAFSSFSNQIVSKLSIQNEELQVQTSMWNWKGYNIRYQYSGNNG 75

Query: 217 PAVLLVHGFGAFGEHYRDNIHALAGAWNRVWTITLLGFGESEKPNI-------VYTELLW 269
           PA++LVHGFGA  +H+R NI  LA + +RV++I L+G+G S+KPN         YT   W
Sbjct: 76  PALVLVHGFGANSDHWRKNIPDLAKS-HRVYSIDLIGYGYSDKPNPRQIGDDSFYTFDTW 134

Query: 270 AELLRDFIVDVVGEPVHLVGNSIGGYFVAIVARIWSVLIKSAVLIN 315
           A  L +F +DVV +    + NSIGG      A     + K  +L+N
Sbjct: 135 AAQLNEFCLDVVKDEAFFICNSIGGVVGLQAAITEPQICKGILLLN 180


>Medtr8g077185.1 | alpha/beta fold hydrolase | HC |
           chr8:32821042-32816495 | 20130731
          Length = 374

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 2/121 (1%)

Query: 200 WRWNGFLVQYTLAGEDGPAVLLVHGFGAFGEHYRDNIHALAGAWNRVWTITLLGFGESEK 259
           W+W    + Y + GE GP ++L+HGFGA   H+R NI  LA   ++V+ + LLGFG S+K
Sbjct: 84  WKWKDHKIHYVVQGE-GPPLVLIHGFGASAFHWRYNIPELAKK-HKVYALDLLGFGWSDK 141

Query: 260 PNIVYTELLWAELLRDFIVDVVGEPVHLVGNSIGGYFVAIVARIWSVLIKSAVLINSAGN 319
             + Y  ++W + + DF+ ++V EP  LVGNS+GG+   I A      +   VL+NSAG 
Sbjct: 142 ALVDYDAMVWRDQVVDFMKEIVKEPAVLVGNSLGGFTALIAAAGLPESVTGVVLLNSAGQ 201

Query: 320 I 320
            
Sbjct: 202 F 202


>Medtr1g076920.1 | alpha/beta fold hydrolase | HC |
           chr1:34327795-34325139 | 20130731
          Length = 390

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 72/134 (53%), Gaps = 14/134 (10%)

Query: 200 WRWNG-----FLVQYTLAGEDGPAVLLVHGFGAFGEHYRDNIHALAGAWNRVWTITLLGF 254
           W+W G     + V    A  + P +LLVHGFGA   H+R NI  L+  +  V+ I LLGF
Sbjct: 94  WKWKGEYSINYFVSSDSAKSNNPPLLLVHGFGASIPHWRRNIKTLSENYT-VYAIDLLGF 152

Query: 255 GESEKP-NIVYTELLWAELLRDFIVDVVGEPVHLVGNSIGGYFVAIVARIW-------SV 306
           G S+KP    YT   WAEL+ DF+ +VV +P  L+GNS+G     I A            
Sbjct: 153 GASDKPPGFSYTMETWAELILDFLDEVVQKPTVLIGNSVGSLACVIAAASGIIRPDSSET 212

Query: 307 LIKSAVLINSAGNI 320
           L++  VL+N +G +
Sbjct: 213 LVRGIVLLNCSGGM 226


>Medtr3g034670.1 | alpha/beta fold hydrolase | HC |
           chr3:11254961-11251349 | 20130731
          Length = 519

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 41/189 (21%)

Query: 207 VQYTLAGE---DGPAVLLVHGFGAFGEHYRDNIHALAGAWNRVWTITLLG---------- 253
           V Y  AG    D P VL + GFG    HY   +  L   + RVW +  LG          
Sbjct: 139 VHYEKAGCENLDSPNVLFLPGFGVGSFHYEKQLMDLGRDF-RVWALDFLGQGMSLPFEDP 197

Query: 254 -------------------FGESEKP---NIVYTELLWAELLRDFIVDVVGEPVHLVGNS 291
                              FG+  +P    +VY+  LW + +R FI +V+GEPV++VGNS
Sbjct: 198 APSSKEGGVTSSGNVSPWGFGDETEPWANELVYSVDLWQDQVRYFIEEVIGEPVYIVGNS 257

Query: 292 IGGYFVAIVARIWSVLIKSAVLINSAGNIIPTYTSIPLPRVSDRQTSGASWLGSRILLFY 351
           +GGY     A  +  L+K   L+N+     P +  +P P  S        W G+  L   
Sbjct: 258 LGGYVALYFAACYPHLVKGVTLLNAT----PFWGFLPNPVKSPGLAKVFPWAGTFPLPSN 313

Query: 352 LRLRIQEIV 360
           ++ ++ E+V
Sbjct: 314 IK-KLTELV 321