Miyakogusa Predicted Gene

Lj0g3v0360189.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0360189.1 Non Characterized Hit- tr|F1Q514|F1Q514_DANRE
Uncharacterized protein OS=Danio rerio GN=zgc:123272
P,28.99,1e-18,seg,NULL; coiled-coil,NULL; Morph_protein1,Exonuclease
V; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,CUFF.24916.1
         (375 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g060790.1 | defects in morphology protein 1 precursor | HC...   463   e-130
Medtr1g062090.1 | defects in morphology protein 1 precursor | HC...   293   2e-79

>Medtr4g060790.1 | defects in morphology protein 1 precursor | HC |
           chr4:22365929-22370030 | 20130731
          Length = 407

 Score =  463 bits (1191), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 236/380 (62%), Positives = 278/380 (73%), Gaps = 15/380 (3%)

Query: 1   MAETSS-DHTPHIPIEIITDDEMALIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 59
           MAETSS ++  +IPIEI++++EMA IE                                 
Sbjct: 1   MAETSSSNNVNNIPIEIVSEEEMAFIEAAYASVSSSSSSSILSRCSSSSSPTRLLHNNAI 60

Query: 60  XXXXXXXXXIKSITVLSKRSFSHATGSGTSTHHPDIED----SSPKLKTLLPDSFLHRFR 115
                    I SIT++SKR  S ++ S +     DIED    SS + K  + DSFL RFR
Sbjct: 61  S--------INSITLVSKRRLSSSSSSSSCAG--DIEDTVVNSSSQKKPNISDSFLRRFR 110

Query: 116 KNRGLSVTDITSTEWCSKQMEFALTLGGRKTNQVMRAGIARHAKLEEEVIKRVEVNIKSK 175
           K R LSVTD+TSTEWC KQMEF L LGGRK NQ M+AGIARHAKLE EVI R+EV ++S+
Sbjct: 111 KKRALSVTDLTSTEWCPKQMEFTLLLGGRKVNQFMKAGIARHAKLEAEVITRMEVKVQSQ 170

Query: 176 EDQWALKFLNFINGVNQLFFEGLTRELPIMGFAEDTWIVGVIDEIRMPSTENDHNPILID 235
           ED+ ALKFLNFI GVNQL FEGLTRELPI+GFAED W+VG+IDE+RMP TENDHNPILID
Sbjct: 171 EDRMALKFLNFIAGVNQLLFEGLTRELPIIGFAEDIWMVGIIDEVRMPLTENDHNPILID 230

Query: 236 TKTRARDTLPSEPQRRNGRLQLMCYKYLWDSLLADDFPSEKFFTKFGLYPEQTLCEDLKV 295
           TKTRARDTLP+EPQRRNGRLQLMCYKY+WD+L+AD+FPS+ FFT FGL P+  LCEDL+V
Sbjct: 231 TKTRARDTLPAEPQRRNGRLQLMCYKYMWDNLVADNFPSKDFFTYFGLNPQSILCEDLRV 290

Query: 296 KSSDPKYSALTLDDVVRYYKNTCSMLLPAHDQLLLRYEYQKDHSLIGEDKFAYDSEWLKS 355
            S+D  +SA TLDDVVRYY+NT  ML PA+DQLLLRYEYQKDHSL+ EDKFAYD+ WLK+
Sbjct: 291 LSADSGFSATTLDDVVRYYRNTYMMLSPANDQLLLRYEYQKDHSLLCEDKFAYDAVWLKN 350

Query: 356 QMHRCIEVWLGKRETTYVPE 375
           Q+  CIE WLG+RE  YV E
Sbjct: 351 QIRSCIEFWLGEREAAYVHE 370


>Medtr1g062090.1 | defects in morphology protein 1 precursor | HC |
           chr1:49017211-49018744 | 20130731
          Length = 388

 Score =  293 bits (750), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 146/288 (50%), Positives = 188/288 (65%), Gaps = 39/288 (13%)

Query: 108 DSFLHRFRKNRGLSVTDITSTEWCSKQMEFALTL------------------GGRKTNQV 149
           ++ LHRFR  RGL VTDIT TEWC KQMEF+L                    GG   ++ 
Sbjct: 79  NTLLHRFRSKRGLFVTDITKTEWCDKQMEFSLLFEEWKNHEAKPDLAFVYGGGGSWKSKA 138

Query: 150 MRAGIARHAKLEEEVIKRVEVNIKSKEDQWALKFLNFINGVNQLFFEGLTRELPIMGF-- 207
           M+AGI RH +LE+EV++ +EVN+KS ED  ALK ++FINGVNQL FEGLTRELPI+ F  
Sbjct: 139 MKAGIDRHFQLEQEVLEPMEVNVKSSEDYMALKLVDFINGVNQLLFEGLTRELPIISFDF 198

Query: 208 AEDTWIVGVIDEIRMPSTENDHNPILIDTKTRARDTLPSEPQRRNGRLQLMCYKYLWDSL 267
           A+  W+VG IDEIRMP  + DHNPI                   NGR+QLMCYKYLWD+L
Sbjct: 199 AQGIWMVGKIDEIRMPKAKKDHNPI-------------------NGRIQLMCYKYLWDNL 239

Query: 268 LADDFPSEKFFTKFGLYPEQTLCEDLKVKSSDPKYSALTLDDVVRYYKNTCSMLLPAHDQ 327
           +  DFPS++ F  F L P + LC+DL+    D   SALT+ DVV  Y+N C +L  A+D+
Sbjct: 240 VVRDFPSKRLFEYFELNPRRNLCKDLRTACVDSGISALTIADVVICYQNMCKLLPRANDK 299

Query: 328 LLLRYEYQKDHSLIGEDKFAYDSEWLKSQMHRCIEVWLGKRETTYVPE 375
           L+LRYE Q+DHSL+ E+KF Y+  W+K+++  C+E WLGKRE + V E
Sbjct: 300 LVLRYESQRDHSLLEEEKFVYEGSWIKNEIRICLEFWLGKREASSVDE 347