Miyakogusa Predicted Gene

Lj0g3v0349259.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0349259.1 Non Characterized Hit- tr|I1M579|I1M579_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,60.26,0.00000000000009, ,CUFF.23986.1
         (61 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g099125.1 | RNA-binding ASCH domain protein | HC | chr2:42...    84   3e-17

>Medtr2g099125.1 | RNA-binding ASCH domain protein | HC |
           chr2:42499656-42495967 | 20130731
          Length = 387

 Score = 84.0 bits (206), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 55/96 (57%), Gaps = 35/96 (36%)

Query: 1   MLEAESLEKVLPGVESVEEGNK-----------------------------------YRG 25
           ML  ESL +VLPG+ESVEEG K                                   + G
Sbjct: 187 MLTTESLGEVLPGIESVEEGVKIYRRFYTEQMEQTNGVLAITVSKLPVQPYTSLASLFSG 246

Query: 26  LKYEGVQGLLGIIHTTGTVPNALPPPRSSLLASFNL 61
           L YEGVQGLLG++HTTGTVPNALPPPRS+LLASFN+
Sbjct: 247 LSYEGVQGLLGLMHTTGTVPNALPPPRSTLLASFNI 282