Miyakogusa Predicted Gene

Lj0g3v0341049.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341049.3 tr|Q60DX1|Q60DX1_ORYSJ Os05g0367400 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0090H02.18
PE=2,55.84,3e-19,Thiamin pyrophosphokinase, catalytic domain,Thiamin
pyrophosphokinase, catalytic domain; TPK_catalyt,CUFF.23346.3
         (92 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g108680.1 | thiaminepyrophosphokinase | HC | chr7:44272644...   139   5e-34
Medtr8g058563.1 | thiaminepyrophosphokinase | HC | chr8:20190407...   109   5e-25

>Medtr7g108680.1 | thiaminepyrophosphokinase | HC |
           chr7:44272644-44276924 | 20130731
          Length = 260

 Score =  139 bits (351), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 64/77 (83%), Positives = 67/77 (87%)

Query: 1   MPLFFPHEQPSHVRSRYKPDLIKGDMDSIRREVLDFYATLGTKIIDESQDQDTTDLHKCV 60
           MPLFFPH+ PSHVR+RYKPD IKGDMDSIR EVLDFYA LGTKIIDESQDQDTTDLHKCV
Sbjct: 65  MPLFFPHQNPSHVRTRYKPDAIKGDMDSIRTEVLDFYANLGTKIIDESQDQDTTDLHKCV 124

Query: 61  AYIRDSTPNVDKSSVSF 77
           AYIRD  PN DKS +  
Sbjct: 125 AYIRDLIPNTDKSELCI 141


>Medtr8g058563.1 | thiaminepyrophosphokinase | HC |
          chr8:20190407-20191939 | 20130731
          Length = 189

 Score =  109 bits (273), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 52/62 (83%), Positives = 53/62 (85%)

Query: 16 RYKPDLIKGDMDSIRREVLDFYATLGTKIIDESQDQDTTDLHKCVAYIRDSTPNVDKSSV 75
          RYKPD IKGDMDSIR EVLDFYA LGTKIIDESQDQDTTDLHKCVAYIRD  PN DKS +
Sbjct: 9  RYKPDAIKGDMDSIRTEVLDFYANLGTKIIDESQDQDTTDLHKCVAYIRDLIPNTDKSEL 68

Query: 76 SF 77
            
Sbjct: 69 CI 70