Miyakogusa Predicted Gene

Lj0g3v0332639.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0332639.1 Non Characterized Hit- tr|D6WW85|D6WW85_TRICA
Putative uncharacterized protein OS=Tribolium
castaneu,26.02,4e-17,TPR-like,NULL; HAT (Half-A-TPR)
repeats,RNA-processing protein, HAT helix; no
description,Tetratrico,CUFF.22682.1
         (724 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g068630.1 | pre-mRNA splicing factor-like protein | HC | c...   762   0.0  
Medtr7g068630.2 | pre-mRNA splicing factor-like protein | HC | c...   762   0.0  
Medtr7g068630.3 | pre-mRNA splicing factor-like protein | HC | c...   762   0.0  
Medtr1g011710.1 | pre-mRNA splicing factor-like protein | HC | c...   733   0.0  

>Medtr7g068630.1 | pre-mRNA splicing factor-like protein | HC |
            chr7:25167319-25162067 | 20130731
          Length = 1054

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/691 (59%), Positives = 487/691 (70%), Gaps = 68/691 (9%)

Query: 81   VEKTNPQHALSWVAAAKQAKLDGKLGEARELIKKGCEKCPRNDHVWL------------- 127
            V +TNP+H   W+AAA+  +L GKL  AR+LI+KGCE+CP+N+ VWL             
Sbjct: 380  VTQTNPKHPPGWIAAARLEELAGKLQAARQLIQKGCEECPKNEDVWLEACRLANPDDAKA 439

Query: 128  -----------------LAAKLAPDKKEKRRLLSKGLQYVRDSFRLWKSAVEVADKYNAR 170
                              A+KL  D   + R+L KGL+++ DS RLWK+ VE+A++ +AR
Sbjct: 440  VIAQGVKSIPTSVKLWMQASKLENDDMNRSRVLRKGLEHIPDSVRLWKAVVELANEEDAR 499

Query: 171  CLLHSAVDDCPLEVELWLALAKLETYAGAKAVLIRARERLPHERALWILDAELEEANGDS 230
             LLH AV+ CPL VELWLALA+LETY  AK VL +ARE LP E A+WI  A+LEEANG +
Sbjct: 500  LLLHRAVEFCPLHVELWLALARLETYDNAKKVLNKAREGLPKEPAIWITAAKLEEANGGA 559

Query: 231  SKIGVIIQFALRCEGL-VSDTEYWMLRGIEY---------REAWVKREREMFDXXXXXXX 280
                   +F    +G  V+  E    RGI           REAW+K              
Sbjct: 560  K------EFITLADGTKVNKVETITRRGIRALQNGNMVIDREAWMKE------------- 600

Query: 281  XXXXXXGGYVETCKEIIRHTIGIGVEEADRKRTWVSEAEECKKRGSVNTARAIYAHALTF 340
                   G V TC+ II+ TIGIGVE+ DRKRTWV++AEECKKRGS+ TARAIY HAL+ 
Sbjct: 601  AEAAERAGSVATCQAIIKCTIGIGVEKEDRKRTWVADAEECKKRGSIETARAIYDHALSV 660

Query: 341  LMSKKSVWVKAAYLEKSHGTTESLEVLLRKAVLYRPRAEVPWLMGGKEKWLAGDVPSXXX 400
             ++KKS+W+KAA LE+SHGT E+L+ LLRKAV YRP+AEV WLMG KEKWLAGDVP+   
Sbjct: 661  FLTKKSIWIKAAQLERSHGTRETLDSLLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARA 720

Query: 401  XXXXXXXXXPDSEDIWLAAAKLEFENNEHEAARLLLSQARTEVNTERVWMKSAIVERELG 460
                     P+SE+IWLAA KLEFEN+E E AR+LL++AR    TERVWMKSAIVERELG
Sbjct: 721  ILQEAYAAIPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELG 780

Query: 461  NIESENTLLKEGLVQFPSFFKLWLMLGQLEERLAAA-----QPEKYFDHLKEARNAYDSG 515
            NIE E  LL EGL QFPSFFKLWLMLGQLEERLA A     Q EK   H  EA+  YDSG
Sbjct: 781  NIEEERKLLNEGLKQFPSFFKLWLMLGQLEERLAEAAKQQDQTEKQHSHKMEAKKVYDSG 840

Query: 516  LKECVNCVPLWLSRANLEEE----TKAREVLKMAQEKNPKNPELLLAAVRLESKHGHQEE 571
            LK C N VPLWLS ANLEEE    +KAR  L MA+++NP+NPEL LAAVR E KHG+++E
Sbjct: 841  LKSCPNSVPLWLSLANLEEEMSGLSKARAALTMARKRNPQNPELWLAAVRAELKHGYKKE 900

Query: 572  ADILMAKALQECPNSGILWAASIEMVPHPLRKTKSMDALKKCDDDPHVIAAVAKLFCHDG 631
            ADILMAKALQECPNSGILWAASIEM P P RK+KSMDALKKC+ DPHVIAAVAKLF  D 
Sbjct: 901  ADILMAKALQECPNSGILWAASIEMAPRPQRKSKSMDALKKCEHDPHVIAAVAKLFWIDR 960

Query: 632  KVDIARTWLNRLVTLAPDIGDFWALCYQFEMHHGTEENREDVLKRCVAAKPKYGEIWQAN 691
            KVD AR WLN+ VTLAPD+GDFWAL Y+FE+ HGTEEN++DVLKRCVAA+PK+GE WQ  
Sbjct: 961  KVDKARNWLNKAVTLAPDVGDFWALLYKFELQHGTEENQKDVLKRCVAAEPKHGEKWQPV 1020

Query: 692  SKAGENAHQPTEIILKKVEDALGKKENAAKN 722
            SKA EN+HQPTE ILKKV  ALGK+E AA++
Sbjct: 1021 SKAVENSHQPTESILKKVVIALGKEEKAAED 1051



 Score = 73.9 bits (180), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 142/352 (40%), Gaps = 43/352 (12%)

Query: 366 VLLRKAVLYRPRAEVPWLMGGKEKWLAGDVPSXXXXXXXXXXXXPDSEDIWLAAAKLEFE 425
           +LL+      P+    W+   + + LAG + +            P +ED+WL A +L   
Sbjct: 375 LLLKSVTQTNPKHPPGWIAAARLEELAGKLQAARQLIQKGCEECPKNEDVWLEACRLA-- 432

Query: 426 NNEHEAARLLLSQARTEVNTERVWMKSAIVERELGNIESENTLLKEGLVQFPSFFKLWLM 485
            N  +A  ++    ++   + ++WM+++ +E +  N    + +L++GL   P   +LW  
Sbjct: 433 -NPDDAKAVIAQGVKSIPTSVKLWMQASKLENDDMN---RSRVLRKGLEHIPDSVRLWKA 488

Query: 486 LGQLEERLAAAQPEKYFDHLKEARNAYDSGLKECVNCVPLWLSRANLEEETKAREVLKMA 545
           + +L                ++AR      ++ C   V LWL+ A LE    A++VL  A
Sbjct: 489 VVELANE-------------EDARLLLHRAVEFCPLHVELWLALARLETYDNAKKVLNKA 535

Query: 546 QEKNPKNPELLLAAVRLESKHGHQEE----ADILMAKALQECPNSGILWAASIEMV---- 597
           +E  PK P + + A +LE  +G  +E    AD      ++     GI    +  MV    
Sbjct: 536 REGLPKEPAIWITAAKLEEANGGAKEFITLADGTKVNKVETITRRGIRALQNGNMVIDRE 595

Query: 598 --------PHPLRKTKSMDALKKC--------DDDPHVIAAVAKLFCHDGKVDIARTWLN 641
                           +  A+ KC        +D      A A+     G ++ AR   +
Sbjct: 596 AWMKEAEAAERAGSVATCQAIIKCTIGIGVEKEDRKRTWVADAEECKKRGSIETARAIYD 655

Query: 642 RLVTLAPDIGDFWALCYQFEMHHGTEENREDVLKRCVAAKPKYGEIWQANSK 693
             +++       W    Q E  HGT E  + +L++ V  +P+   +W   +K
Sbjct: 656 HALSVFLTKKSIWIKAAQLERSHGTRETLDSLLRKAVTYRPQAEVLWLMGAK 707


>Medtr7g068630.2 | pre-mRNA splicing factor-like protein | HC |
            chr7:25167319-25161996 | 20130731
          Length = 1054

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/691 (59%), Positives = 487/691 (70%), Gaps = 68/691 (9%)

Query: 81   VEKTNPQHALSWVAAAKQAKLDGKLGEARELIKKGCEKCPRNDHVWL------------- 127
            V +TNP+H   W+AAA+  +L GKL  AR+LI+KGCE+CP+N+ VWL             
Sbjct: 380  VTQTNPKHPPGWIAAARLEELAGKLQAARQLIQKGCEECPKNEDVWLEACRLANPDDAKA 439

Query: 128  -----------------LAAKLAPDKKEKRRLLSKGLQYVRDSFRLWKSAVEVADKYNAR 170
                              A+KL  D   + R+L KGL+++ DS RLWK+ VE+A++ +AR
Sbjct: 440  VIAQGVKSIPTSVKLWMQASKLENDDMNRSRVLRKGLEHIPDSVRLWKAVVELANEEDAR 499

Query: 171  CLLHSAVDDCPLEVELWLALAKLETYAGAKAVLIRARERLPHERALWILDAELEEANGDS 230
             LLH AV+ CPL VELWLALA+LETY  AK VL +ARE LP E A+WI  A+LEEANG +
Sbjct: 500  LLLHRAVEFCPLHVELWLALARLETYDNAKKVLNKAREGLPKEPAIWITAAKLEEANGGA 559

Query: 231  SKIGVIIQFALRCEGL-VSDTEYWMLRGIEY---------REAWVKREREMFDXXXXXXX 280
                   +F    +G  V+  E    RGI           REAW+K              
Sbjct: 560  K------EFITLADGTKVNKVETITRRGIRALQNGNMVIDREAWMKE------------- 600

Query: 281  XXXXXXGGYVETCKEIIRHTIGIGVEEADRKRTWVSEAEECKKRGSVNTARAIYAHALTF 340
                   G V TC+ II+ TIGIGVE+ DRKRTWV++AEECKKRGS+ TARAIY HAL+ 
Sbjct: 601  AEAAERAGSVATCQAIIKCTIGIGVEKEDRKRTWVADAEECKKRGSIETARAIYDHALSV 660

Query: 341  LMSKKSVWVKAAYLEKSHGTTESLEVLLRKAVLYRPRAEVPWLMGGKEKWLAGDVPSXXX 400
             ++KKS+W+KAA LE+SHGT E+L+ LLRKAV YRP+AEV WLMG KEKWLAGDVP+   
Sbjct: 661  FLTKKSIWIKAAQLERSHGTRETLDSLLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARA 720

Query: 401  XXXXXXXXXPDSEDIWLAAAKLEFENNEHEAARLLLSQARTEVNTERVWMKSAIVERELG 460
                     P+SE+IWLAA KLEFEN+E E AR+LL++AR    TERVWMKSAIVERELG
Sbjct: 721  ILQEAYAAIPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELG 780

Query: 461  NIESENTLLKEGLVQFPSFFKLWLMLGQLEERLAAA-----QPEKYFDHLKEARNAYDSG 515
            NIE E  LL EGL QFPSFFKLWLMLGQLEERLA A     Q EK   H  EA+  YDSG
Sbjct: 781  NIEEERKLLNEGLKQFPSFFKLWLMLGQLEERLAEAAKQQDQTEKQHSHKMEAKKVYDSG 840

Query: 516  LKECVNCVPLWLSRANLEEE----TKAREVLKMAQEKNPKNPELLLAAVRLESKHGHQEE 571
            LK C N VPLWLS ANLEEE    +KAR  L MA+++NP+NPEL LAAVR E KHG+++E
Sbjct: 841  LKSCPNSVPLWLSLANLEEEMSGLSKARAALTMARKRNPQNPELWLAAVRAELKHGYKKE 900

Query: 572  ADILMAKALQECPNSGILWAASIEMVPHPLRKTKSMDALKKCDDDPHVIAAVAKLFCHDG 631
            ADILMAKALQECPNSGILWAASIEM P P RK+KSMDALKKC+ DPHVIAAVAKLF  D 
Sbjct: 901  ADILMAKALQECPNSGILWAASIEMAPRPQRKSKSMDALKKCEHDPHVIAAVAKLFWIDR 960

Query: 632  KVDIARTWLNRLVTLAPDIGDFWALCYQFEMHHGTEENREDVLKRCVAAKPKYGEIWQAN 691
            KVD AR WLN+ VTLAPD+GDFWAL Y+FE+ HGTEEN++DVLKRCVAA+PK+GE WQ  
Sbjct: 961  KVDKARNWLNKAVTLAPDVGDFWALLYKFELQHGTEENQKDVLKRCVAAEPKHGEKWQPV 1020

Query: 692  SKAGENAHQPTEIILKKVEDALGKKENAAKN 722
            SKA EN+HQPTE ILKKV  ALGK+E AA++
Sbjct: 1021 SKAVENSHQPTESILKKVVIALGKEEKAAED 1051



 Score = 73.9 bits (180), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 142/352 (40%), Gaps = 43/352 (12%)

Query: 366 VLLRKAVLYRPRAEVPWLMGGKEKWLAGDVPSXXXXXXXXXXXXPDSEDIWLAAAKLEFE 425
           +LL+      P+    W+   + + LAG + +            P +ED+WL A +L   
Sbjct: 375 LLLKSVTQTNPKHPPGWIAAARLEELAGKLQAARQLIQKGCEECPKNEDVWLEACRLA-- 432

Query: 426 NNEHEAARLLLSQARTEVNTERVWMKSAIVERELGNIESENTLLKEGLVQFPSFFKLWLM 485
            N  +A  ++    ++   + ++WM+++ +E +  N    + +L++GL   P   +LW  
Sbjct: 433 -NPDDAKAVIAQGVKSIPTSVKLWMQASKLENDDMN---RSRVLRKGLEHIPDSVRLWKA 488

Query: 486 LGQLEERLAAAQPEKYFDHLKEARNAYDSGLKECVNCVPLWLSRANLEEETKAREVLKMA 545
           + +L                ++AR      ++ C   V LWL+ A LE    A++VL  A
Sbjct: 489 VVELANE-------------EDARLLLHRAVEFCPLHVELWLALARLETYDNAKKVLNKA 535

Query: 546 QEKNPKNPELLLAAVRLESKHGHQEE----ADILMAKALQECPNSGILWAASIEMV---- 597
           +E  PK P + + A +LE  +G  +E    AD      ++     GI    +  MV    
Sbjct: 536 REGLPKEPAIWITAAKLEEANGGAKEFITLADGTKVNKVETITRRGIRALQNGNMVIDRE 595

Query: 598 --------PHPLRKTKSMDALKKC--------DDDPHVIAAVAKLFCHDGKVDIARTWLN 641
                           +  A+ KC        +D      A A+     G ++ AR   +
Sbjct: 596 AWMKEAEAAERAGSVATCQAIIKCTIGIGVEKEDRKRTWVADAEECKKRGSIETARAIYD 655

Query: 642 RLVTLAPDIGDFWALCYQFEMHHGTEENREDVLKRCVAAKPKYGEIWQANSK 693
             +++       W    Q E  HGT E  + +L++ V  +P+   +W   +K
Sbjct: 656 HALSVFLTKKSIWIKAAQLERSHGTRETLDSLLRKAVTYRPQAEVLWLMGAK 707


>Medtr7g068630.3 | pre-mRNA splicing factor-like protein | HC |
            chr7:25167319-25162067 | 20130731
          Length = 1054

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/691 (59%), Positives = 487/691 (70%), Gaps = 68/691 (9%)

Query: 81   VEKTNPQHALSWVAAAKQAKLDGKLGEARELIKKGCEKCPRNDHVWL------------- 127
            V +TNP+H   W+AAA+  +L GKL  AR+LI+KGCE+CP+N+ VWL             
Sbjct: 380  VTQTNPKHPPGWIAAARLEELAGKLQAARQLIQKGCEECPKNEDVWLEACRLANPDDAKA 439

Query: 128  -----------------LAAKLAPDKKEKRRLLSKGLQYVRDSFRLWKSAVEVADKYNAR 170
                              A+KL  D   + R+L KGL+++ DS RLWK+ VE+A++ +AR
Sbjct: 440  VIAQGVKSIPTSVKLWMQASKLENDDMNRSRVLRKGLEHIPDSVRLWKAVVELANEEDAR 499

Query: 171  CLLHSAVDDCPLEVELWLALAKLETYAGAKAVLIRARERLPHERALWILDAELEEANGDS 230
             LLH AV+ CPL VELWLALA+LETY  AK VL +ARE LP E A+WI  A+LEEANG +
Sbjct: 500  LLLHRAVEFCPLHVELWLALARLETYDNAKKVLNKAREGLPKEPAIWITAAKLEEANGGA 559

Query: 231  SKIGVIIQFALRCEGL-VSDTEYWMLRGIEY---------REAWVKREREMFDXXXXXXX 280
                   +F    +G  V+  E    RGI           REAW+K              
Sbjct: 560  K------EFITLADGTKVNKVETITRRGIRALQNGNMVIDREAWMKE------------- 600

Query: 281  XXXXXXGGYVETCKEIIRHTIGIGVEEADRKRTWVSEAEECKKRGSVNTARAIYAHALTF 340
                   G V TC+ II+ TIGIGVE+ DRKRTWV++AEECKKRGS+ TARAIY HAL+ 
Sbjct: 601  AEAAERAGSVATCQAIIKCTIGIGVEKEDRKRTWVADAEECKKRGSIETARAIYDHALSV 660

Query: 341  LMSKKSVWVKAAYLEKSHGTTESLEVLLRKAVLYRPRAEVPWLMGGKEKWLAGDVPSXXX 400
             ++KKS+W+KAA LE+SHGT E+L+ LLRKAV YRP+AEV WLMG KEKWLAGDVP+   
Sbjct: 661  FLTKKSIWIKAAQLERSHGTRETLDSLLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARA 720

Query: 401  XXXXXXXXXPDSEDIWLAAAKLEFENNEHEAARLLLSQARTEVNTERVWMKSAIVERELG 460
                     P+SE+IWLAA KLEFEN+E E AR+LL++AR    TERVWMKSAIVERELG
Sbjct: 721  ILQEAYAAIPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELG 780

Query: 461  NIESENTLLKEGLVQFPSFFKLWLMLGQLEERLAAA-----QPEKYFDHLKEARNAYDSG 515
            NIE E  LL EGL QFPSFFKLWLMLGQLEERLA A     Q EK   H  EA+  YDSG
Sbjct: 781  NIEEERKLLNEGLKQFPSFFKLWLMLGQLEERLAEAAKQQDQTEKQHSHKMEAKKVYDSG 840

Query: 516  LKECVNCVPLWLSRANLEEE----TKAREVLKMAQEKNPKNPELLLAAVRLESKHGHQEE 571
            LK C N VPLWLS ANLEEE    +KAR  L MA+++NP+NPEL LAAVR E KHG+++E
Sbjct: 841  LKSCPNSVPLWLSLANLEEEMSGLSKARAALTMARKRNPQNPELWLAAVRAELKHGYKKE 900

Query: 572  ADILMAKALQECPNSGILWAASIEMVPHPLRKTKSMDALKKCDDDPHVIAAVAKLFCHDG 631
            ADILMAKALQECPNSGILWAASIEM P P RK+KSMDALKKC+ DPHVIAAVAKLF  D 
Sbjct: 901  ADILMAKALQECPNSGILWAASIEMAPRPQRKSKSMDALKKCEHDPHVIAAVAKLFWIDR 960

Query: 632  KVDIARTWLNRLVTLAPDIGDFWALCYQFEMHHGTEENREDVLKRCVAAKPKYGEIWQAN 691
            KVD AR WLN+ VTLAPD+GDFWAL Y+FE+ HGTEEN++DVLKRCVAA+PK+GE WQ  
Sbjct: 961  KVDKARNWLNKAVTLAPDVGDFWALLYKFELQHGTEENQKDVLKRCVAAEPKHGEKWQPV 1020

Query: 692  SKAGENAHQPTEIILKKVEDALGKKENAAKN 722
            SKA EN+HQPTE ILKKV  ALGK+E AA++
Sbjct: 1021 SKAVENSHQPTESILKKVVIALGKEEKAAED 1051



 Score = 73.9 bits (180), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 142/352 (40%), Gaps = 43/352 (12%)

Query: 366 VLLRKAVLYRPRAEVPWLMGGKEKWLAGDVPSXXXXXXXXXXXXPDSEDIWLAAAKLEFE 425
           +LL+      P+    W+   + + LAG + +            P +ED+WL A +L   
Sbjct: 375 LLLKSVTQTNPKHPPGWIAAARLEELAGKLQAARQLIQKGCEECPKNEDVWLEACRLA-- 432

Query: 426 NNEHEAARLLLSQARTEVNTERVWMKSAIVERELGNIESENTLLKEGLVQFPSFFKLWLM 485
            N  +A  ++    ++   + ++WM+++ +E +  N    + +L++GL   P   +LW  
Sbjct: 433 -NPDDAKAVIAQGVKSIPTSVKLWMQASKLENDDMN---RSRVLRKGLEHIPDSVRLWKA 488

Query: 486 LGQLEERLAAAQPEKYFDHLKEARNAYDSGLKECVNCVPLWLSRANLEEETKAREVLKMA 545
           + +L                ++AR      ++ C   V LWL+ A LE    A++VL  A
Sbjct: 489 VVELANE-------------EDARLLLHRAVEFCPLHVELWLALARLETYDNAKKVLNKA 535

Query: 546 QEKNPKNPELLLAAVRLESKHGHQEE----ADILMAKALQECPNSGILWAASIEMV---- 597
           +E  PK P + + A +LE  +G  +E    AD      ++     GI    +  MV    
Sbjct: 536 REGLPKEPAIWITAAKLEEANGGAKEFITLADGTKVNKVETITRRGIRALQNGNMVIDRE 595

Query: 598 --------PHPLRKTKSMDALKKC--------DDDPHVIAAVAKLFCHDGKVDIARTWLN 641
                           +  A+ KC        +D      A A+     G ++ AR   +
Sbjct: 596 AWMKEAEAAERAGSVATCQAIIKCTIGIGVEKEDRKRTWVADAEECKKRGSIETARAIYD 655

Query: 642 RLVTLAPDIGDFWALCYQFEMHHGTEENREDVLKRCVAAKPKYGEIWQANSK 693
             +++       W    Q E  HGT E  + +L++ V  +P+   +W   +K
Sbjct: 656 HALSVFLTKKSIWIKAAQLERSHGTRETLDSLLRKAVTYRPQAEVLWLMGAK 707


>Medtr1g011710.1 | pre-mRNA splicing factor-like protein | HC |
           chr1:2191122-2188299 | 20130731
          Length = 895

 Score =  733 bits (1893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/669 (58%), Positives = 472/669 (70%), Gaps = 64/669 (9%)

Query: 81  VEKTNPQHALSWVAAAKQAKLDGKLGEARELIKKGCEKCPRNDHVWLLAAKLA-PDKKE- 138
           V +TNP++A  W+AAA+  +L GK+ EAR LIKKGCE+CP+N+ VWL A +L  PD+ + 
Sbjct: 244 VTRTNPKYACGWIAAARLEELAGKVKEARLLIKKGCEECPKNEDVWLEACRLVNPDETKG 303

Query: 139 ----------------------------KRRLLSKGLQYVRDSFRLWKSAVEVADKYNAR 170
                                       K R+L KGL+ V +S RLWK+ VE+A++ +AR
Sbjct: 304 VIAKGVKFIPNSVKLWMRASDLEDDDVNKSRVLRKGLECVPNSVRLWKAVVELANEEDAR 363

Query: 171 CLLHSAVDDCPLEVELWLALAKLETYAGAKAVLIRARERLPHERALWILDAELEEANGDS 230
            LLH AV+ CPL  ELWLALA+LETY  AK VL +A  RLP E  +WI  A+LEEANG++
Sbjct: 364 LLLHRAVECCPLHAELWLALARLETYDNAKIVLNKALSRLPKEATIWIAMAKLEEANGNT 423

Query: 231 SKIGVIIQFALRCEGLVSDTEYWMLRGIEYREAWVKREREMFDXXXXXXXXXXXXXGGYV 290
            K+G  IQ AL   G+V + E WM      +EA V                     GG +
Sbjct: 424 DKVGKRIQKALEEGGVVINRETWM------KEAEV------------------AERGGSI 459

Query: 291 ETCKEIIRHTIGIGVEEADRKRTWVSEAEECKKRGSVNTARAIYAHALTFLMSKKSVWVK 350
           ETC+ II++TIGIGVEE DRKRTWV++AEEC+KR S+ TARAIY HAL   ++KKS+W+K
Sbjct: 460 ETCRAIIKNTIGIGVEEEDRKRTWVADAEECEKRDSIETARAIYDHALNVFLTKKSIWIK 519

Query: 351 AAYLEKSHGTTESLEVLLRKAVLYRPRAEVPWLMGGKEKWLAGDVPSXXXXXXXXXXXXP 410
           AA LE+SHGT ES + LLR+AV Y P+ EV WLM  KEKWLAGDVP+            P
Sbjct: 520 AAQLERSHGTRESFDGLLRRAVTYIPQVEVLWLMLAKEKWLAGDVPAARALLQEAYAAIP 579

Query: 411 DSEDIWLAAAKLEFENNEHEAARLLLSQARTEVN-TERVWMKSAIVERELGNIESENTLL 469
           +SE++WLAA KLEFEN+E E AR+LL++AR ++  TERVWMKSAIVERELGN+E E  +L
Sbjct: 580 NSEELWLAAFKLEFENHEPERARMLLAKARDQIGGTERVWMKSAIVERELGNVEEERRML 639

Query: 470 KEGLVQFPSFFKLWLMLGQLEERLAAA-----QPEKYFDHLKEARNAYDSGLKECVNCVP 524
            EGL QFPSF+KLWLMLGQLEERLA       QPEK   H+  A+  Y+SG K C N VP
Sbjct: 640 NEGLKQFPSFYKLWLMLGQLEERLAKTTKRQDQPEKRHSHMMTAKKVYESGQKNCPNSVP 699

Query: 525 LWLSRANLEEE----TKAREVLKMAQEKNPKNPELLLAAVRLESKHGHQEEADILMAKAL 580
           LWLS ANLEEE    +K R +  MA++KNP+NPEL LAA+R E KHG+++EAD LMAKAL
Sbjct: 700 LWLSLANLEEEMNGLSKVRVIFTMARKKNPQNPELWLAAIRAELKHGYKKEADTLMAKAL 759

Query: 581 QECPNSGILWAASIEMVPHPLRKTKSMDALKKCDDDPHVIAAVAKLFCHDGKVDIARTWL 640
           QECPNSGILWAASIEM PHP RKTKS DALKKC+ DPHVIA  AKL  H  KV+ ART L
Sbjct: 760 QECPNSGILWAASIEMAPHPQRKTKSKDALKKCNSDPHVIAGTAKLLWHHRKVEKARTLL 819

Query: 641 NRLVTLAPDIGDFWALCYQFEMHHGTEENREDVLKRCVAAKPKYGEIWQANSKAGENAHQ 700
           N  VTLAPDIGDFW LCY+FE+ HGTEEN++DVLKRCVAA+PK+GE WQA SKA ENAHQ
Sbjct: 820 NTAVTLAPDIGDFWVLCYKFELQHGTEENQKDVLKRCVAAEPKHGEKWQAVSKALENAHQ 879

Query: 701 PTEIILKKV 709
           PTE ILKKV
Sbjct: 880 PTESILKKV 888



 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 139/341 (40%), Gaps = 46/341 (13%)

Query: 366 VLLRKAVLYRPRAEVPWLMGGKEKWLAGDVPSXXXXXXXXXXXXPDSEDIWLAAAKLEFE 425
           +LL+      P+    W+   + + LAG V              P +ED+WL A +L   
Sbjct: 239 LLLKSVTRTNPKYACGWIAAARLEELAGKVKEARLLIKKGCEECPKNEDVWLEACRLV-- 296

Query: 426 NNEHEAARLLLSQARTEVNTERVWMKSAIVERELGNIESENTLLKEGLVQFPSFFKLWLM 485
            N  E   ++    +   N+ ++WM+++ +E +  N   ++ +L++GL   P+  +LW  
Sbjct: 297 -NPDETKGVIAKGVKFIPNSVKLWMRASDLEDDDVN---KSRVLRKGLECVPNSVRLWKA 352

Query: 486 LGQLEERLAAAQPEKYFDHLKEARNAYDSGLKECVNCVP----LWLSRANLEEETKAREV 541
           + +    LA  +  +   H               V C P    LWL+ A LE    A+ V
Sbjct: 353 VVE----LANEEDARLLLH-------------RAVECCPLHAELWLALARLETYDNAKIV 395

Query: 542 LKMAQEKNPKNPELLLAAVRLESKHGHQEEADILMAKALQECPNSGIL-----W------ 590
           L  A  + PK   + +A  +LE  +G+ ++    + KAL+E    G++     W      
Sbjct: 396 LNKALSRLPKEATIWIAMAKLEEANGNTDKVGKRIQKALEE---GGVVINRETWMKEAEV 452

Query: 591 ---AASIEMVPHPLRKTKSMDALKKCDDDPHVIAAVAKLFCHDGKVDIARTWLNRLVTLA 647
                SIE     ++ T  +   +  +D      A A+       ++ AR   +  + + 
Sbjct: 453 AERGGSIETCRAIIKNTIGIGVEE--EDRKRTWVADAEECEKRDSIETARAIYDHALNVF 510

Query: 648 PDIGDFWALCYQFEMHHGTEENREDVLKRCVAAKPKYGEIW 688
                 W    Q E  HGT E+ + +L+R V   P+   +W
Sbjct: 511 LTKKSIWIKAAQLERSHGTRESFDGLLRRAVTYIPQVEVLW 551



 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 21/215 (9%)

Query: 423 EFENNEHEAARLLL-SQARTEVNTERVWMKSAIVERELGNIESENTLLKEGLVQFPSFFK 481
           + E ++   ARLLL S  RT       W+ +A +E   G ++    L+K+G  + P    
Sbjct: 228 DTEVSDFNKARLLLKSVTRTNPKYACGWIAAARLEELAGKVKEARLLIKKGCEECPKNED 287

Query: 482 LWLMLGQLEERLAAAQPEKYFDHLKEARNAYDSGLKECVNCVPLWLSRANLEEE--TKAR 539
           +WL   +L        P+       E +     G+K   N V LW+  ++LE++   K+R
Sbjct: 288 VWLEACRL------VNPD-------ETKGVIAKGVKFIPNSVKLWMRASDLEDDDVNKSR 334

Query: 540 EVLKMAQEKNPKNPELLLAAVRLESKHGHQEEADILMAKALQECPNSGILWAASIEMVPH 599
            VL+   E  P +  L  A V L     ++E+A +L+ +A++ CP    LW A   +  +
Sbjct: 335 -VLRKGLECVPNSVRLWKAVVEL----ANEEDARLLLHRAVECCPLHAELWLALARLETY 389

Query: 600 PLRKTKSMDALKKCDDDPHVIAAVAKLFCHDGKVD 634
              K     AL +   +  +  A+AKL   +G  D
Sbjct: 390 DNAKIVLNKALSRLPKEATIWIAMAKLEEANGNTD 424



 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 36/223 (16%)

Query: 520 VNCVPLWLSRANLEEETKAREVLKMAQEKNPKNPELLLAAVRLESKHGHQEEADILMAKA 579
           V C  +  S   + +  KAR +LK     NPK     +AA RLE   G  +EA +L+ K 
Sbjct: 219 VLCNNVIASDTEVSDFNKARLLLKSVTRTNPKYACGWIAAARLEELAGKVKEARLLIKKG 278

Query: 580 LQECPNSGILW----------------AASIEMVPHPLRKTKSMDALKKCDDDPHVIAAV 623
            +ECP +  +W                A  ++ +P+ ++       L+  DDD +    +
Sbjct: 279 CEECPKNEDVWLEACRLVNPDETKGVIAKGVKFIPNSVKLWMRASDLE--DDDVNKSRVL 336

Query: 624 AK-LFCHDGKVDI------------ARTWLNRLVTLAPDIGDFWALCYQFEMHHGTEENR 670
            K L C    V +            AR  L+R V   P   + W    + E    T +N 
Sbjct: 337 RKGLECVPNSVRLWKAVVELANEEDARLLLHRAVECCPLHAELWLALARLE----TYDNA 392

Query: 671 EDVLKRCVAAKPKYGEIWQANSKAGENAHQPTEIILKKVEDAL 713
           + VL + ++  PK   IW A +K  E A+  T+ + K+++ AL
Sbjct: 393 KIVLNKALSRLPKEATIWIAMAKL-EEANGNTDKVGKRIQKAL 434