Miyakogusa Predicted Gene

Lj0g3v0330209.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0330209.1 NODE_22403_length_1831_cov_33.394867.path1.1
         (473 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g132910.3 | integrator complex subunit 3 | HC | chr4:55604...   696   0.0  
Medtr4g132910.2 | integrator complex subunit 3 | HC | chr4:55604...   696   0.0  
Medtr4g132910.1 | integrator complex subunit 3 | HC | chr4:55604...   692   0.0  
Medtr4g132950.1 | integrator complex subunit 3 | HC | chr4:55616...    79   1e-14
Medtr8g106110.1 | transmembrane protein, putative | LC | chr8:44...    51   3e-06

>Medtr4g132910.3 | integrator complex subunit 3 | HC |
           chr4:55604499-55608717 | 20130731
          Length = 481

 Score =  696 bits (1797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/470 (71%), Positives = 390/470 (82%), Gaps = 1/470 (0%)

Query: 1   MVLKLTLTSPHEAETQIEISLRQAFISLEPSLKPPFSLAIPNSDDYTHLNRAILHGVLAE 60
           MV  LTLT+PHEAE QIEISL+Q+  SL+PSLKPPFSL IPN D+Y  LN AILH +L +
Sbjct: 1   MVPNLTLTAPHEAENQIEISLKQSLQSLQPSLKPPFSLTIPNPDEYIQLNHAILHAILTQ 60

Query: 61  PHLAKTHIKHLHGIVTDGYSTFINLLLDIVHTLYPKLLAPVKTQLLWVTEEMVHVSAIGF 120
           PH +KTH+KHLH I+TDGY+TF+NLL +IVH LYPKLL  VK QL+WVT+EM+ VS IG+
Sbjct: 61  PHFSKTHVKHLHAIITDGYATFLNLLFNIVHHLYPKLLGSVKHQLIWVTDEMIQVSGIGY 120

Query: 121 EPXXXXXXRQILGGDFSDGNLWLCSKMVTLFLENWECFLDEAPSVLCSALYVFLRVLHDH 180
           +       RQI+GGDFSD NLWLC K+VTL L+ W+C L+E P VLCS LYVFLRVL DH
Sbjct: 121 DALLISLLRQIVGGDFSDDNLWLCEKLVTLLLDKWDCLLEEMPHVLCSGLYVFLRVLADH 180

Query: 181 CSVNVEKLKTLRRLEIHFCVKVVREEFHLCLKIGRDFIRLLQDLVHVPEFQAIWKDLMVN 240
           C VN EK ++L+RLE+HFCVK+VREEFHLC+KIGRDFIRLLQDLVHVPEF++IWKDLM+N
Sbjct: 181 CRVNGEKFESLKRLEVHFCVKIVREEFHLCMKIGRDFIRLLQDLVHVPEFKSIWKDLMLN 240

Query: 241 PSSFNTPEFVGVSQFYHTRTSSKYALLRISPEMETQLRFLLTYVKFGNHKRHQLWFGRKF 300
           PSSFNT  F GVSQ Y TRTSS+YALLRI+P METQLRFLLT+VK GN KRH +WF RKF
Sbjct: 241 PSSFNTLGFSGVSQIYLTRTSSRYALLRITPAMETQLRFLLTHVKLGNQKRHLMWFARKF 300

Query: 301 LNEPDKETVIVDMVKFICCAHHPPNEIIQSDIVPRWAVIGWLLKCCRKNH-VENSVKLAL 359
           LNEPDKETV+VD+V+FICCAHHPPNEIIQSDIVPRWAVIGWLL   RK   VE + KLAL
Sbjct: 301 LNEPDKETVVVDIVRFICCAHHPPNEIIQSDIVPRWAVIGWLLTTFRKKSCVEANAKLAL 360

Query: 360 FYDWLFFDGRVDNIMNIEPAMLLMVHCIPKYIDITNALLGFLLHLLDTYDVQHKDVIVKG 419
           FYDWLFFD +VDNIMNIEPA+LLMVH I +Y+++TN LL FLL L+D YD++HKD+IVKG
Sbjct: 361 FYDWLFFDEKVDNIMNIEPAILLMVHSITQYVEMTNTLLEFLLLLVDNYDMEHKDIIVKG 420

Query: 420 VGSAFHSLASKGVIQSLDVLTSCPALSPLLRECLGRLLSDLKLGSSNGFL 469
           V  AF  L SKGVIQSLD+LTSCP LSP L+E L RLLS  K  SS  FL
Sbjct: 421 VSLAFRFLESKGVIQSLDILTSCPTLSPSLKEGLSRLLSSGKPESSKEFL 470


>Medtr4g132910.2 | integrator complex subunit 3 | HC |
           chr4:55604499-55608717 | 20130731
          Length = 481

 Score =  696 bits (1797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/470 (71%), Positives = 390/470 (82%), Gaps = 1/470 (0%)

Query: 1   MVLKLTLTSPHEAETQIEISLRQAFISLEPSLKPPFSLAIPNSDDYTHLNRAILHGVLAE 60
           MV  LTLT+PHEAE QIEISL+Q+  SL+PSLKPPFSL IPN D+Y  LN AILH +L +
Sbjct: 1   MVPNLTLTAPHEAENQIEISLKQSLQSLQPSLKPPFSLTIPNPDEYIQLNHAILHAILTQ 60

Query: 61  PHLAKTHIKHLHGIVTDGYSTFINLLLDIVHTLYPKLLAPVKTQLLWVTEEMVHVSAIGF 120
           PH +KTH+KHLH I+TDGY+TF+NLL +IVH LYPKLL  VK QL+WVT+EM+ VS IG+
Sbjct: 61  PHFSKTHVKHLHAIITDGYATFLNLLFNIVHHLYPKLLGSVKHQLIWVTDEMIQVSGIGY 120

Query: 121 EPXXXXXXRQILGGDFSDGNLWLCSKMVTLFLENWECFLDEAPSVLCSALYVFLRVLHDH 180
           +       RQI+GGDFSD NLWLC K+VTL L+ W+C L+E P VLCS LYVFLRVL DH
Sbjct: 121 DALLISLLRQIVGGDFSDDNLWLCEKLVTLLLDKWDCLLEEMPHVLCSGLYVFLRVLADH 180

Query: 181 CSVNVEKLKTLRRLEIHFCVKVVREEFHLCLKIGRDFIRLLQDLVHVPEFQAIWKDLMVN 240
           C VN EK ++L+RLE+HFCVK+VREEFHLC+KIGRDFIRLLQDLVHVPEF++IWKDLM+N
Sbjct: 181 CRVNGEKFESLKRLEVHFCVKIVREEFHLCMKIGRDFIRLLQDLVHVPEFKSIWKDLMLN 240

Query: 241 PSSFNTPEFVGVSQFYHTRTSSKYALLRISPEMETQLRFLLTYVKFGNHKRHQLWFGRKF 300
           PSSFNT  F GVSQ Y TRTSS+YALLRI+P METQLRFLLT+VK GN KRH +WF RKF
Sbjct: 241 PSSFNTLGFSGVSQIYLTRTSSRYALLRITPAMETQLRFLLTHVKLGNQKRHLMWFARKF 300

Query: 301 LNEPDKETVIVDMVKFICCAHHPPNEIIQSDIVPRWAVIGWLLKCCRKNH-VENSVKLAL 359
           LNEPDKETV+VD+V+FICCAHHPPNEIIQSDIVPRWAVIGWLL   RK   VE + KLAL
Sbjct: 301 LNEPDKETVVVDIVRFICCAHHPPNEIIQSDIVPRWAVIGWLLTTFRKKSCVEANAKLAL 360

Query: 360 FYDWLFFDGRVDNIMNIEPAMLLMVHCIPKYIDITNALLGFLLHLLDTYDVQHKDVIVKG 419
           FYDWLFFD +VDNIMNIEPA+LLMVH I +Y+++TN LL FLL L+D YD++HKD+IVKG
Sbjct: 361 FYDWLFFDEKVDNIMNIEPAILLMVHSITQYVEMTNTLLEFLLLLVDNYDMEHKDIIVKG 420

Query: 420 VGSAFHSLASKGVIQSLDVLTSCPALSPLLRECLGRLLSDLKLGSSNGFL 469
           V  AF  L SKGVIQSLD+LTSCP LSP L+E L RLLS  K  SS  FL
Sbjct: 421 VSLAFRFLESKGVIQSLDILTSCPTLSPSLKEGLSRLLSSGKPESSKEFL 470


>Medtr4g132910.1 | integrator complex subunit 3 | HC |
           chr4:55604521-55608396 | 20130731
          Length = 620

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/470 (71%), Positives = 390/470 (82%), Gaps = 1/470 (0%)

Query: 1   MVLKLTLTSPHEAETQIEISLRQAFISLEPSLKPPFSLAIPNSDDYTHLNRAILHGVLAE 60
           MV  LTLT+PHEAE QIEISL+Q+  SL+PSLKPPFSL IPN D+Y  LN AILH +L +
Sbjct: 1   MVPNLTLTAPHEAENQIEISLKQSLQSLQPSLKPPFSLTIPNPDEYIQLNHAILHAILTQ 60

Query: 61  PHLAKTHIKHLHGIVTDGYSTFINLLLDIVHTLYPKLLAPVKTQLLWVTEEMVHVSAIGF 120
           PH +KTH+KHLH I+TDGY+TF+NLL +IVH LYPKLL  VK QL+WVT+EM+ VS IG+
Sbjct: 61  PHFSKTHVKHLHAIITDGYATFLNLLFNIVHHLYPKLLGSVKHQLIWVTDEMIQVSGIGY 120

Query: 121 EPXXXXXXRQILGGDFSDGNLWLCSKMVTLFLENWECFLDEAPSVLCSALYVFLRVLHDH 180
           +       RQI+GGDFSD NLWLC K+VTL L+ W+C L+E P VLCS LYVFLRVL DH
Sbjct: 121 DALLISLLRQIVGGDFSDDNLWLCEKLVTLLLDKWDCLLEEMPHVLCSGLYVFLRVLADH 180

Query: 181 CSVNVEKLKTLRRLEIHFCVKVVREEFHLCLKIGRDFIRLLQDLVHVPEFQAIWKDLMVN 240
           C VN EK ++L+RLE+HFCVK+VREEFHLC+KIGRDFIRLLQDLVHVPEF++IWKDLM+N
Sbjct: 181 CRVNGEKFESLKRLEVHFCVKIVREEFHLCMKIGRDFIRLLQDLVHVPEFKSIWKDLMLN 240

Query: 241 PSSFNTPEFVGVSQFYHTRTSSKYALLRISPEMETQLRFLLTYVKFGNHKRHQLWFGRKF 300
           PSSFNT  F GVSQ Y TRTSS+YALLRI+P METQLRFLLT+VK GN KRH +WF RKF
Sbjct: 241 PSSFNTLGFSGVSQIYLTRTSSRYALLRITPAMETQLRFLLTHVKLGNQKRHLMWFARKF 300

Query: 301 LNEPDKETVIVDMVKFICCAHHPPNEIIQSDIVPRWAVIGWLLKCCRKNH-VENSVKLAL 359
           LNEPDKETV+VD+V+FICCAHHPPNEIIQSDIVPRWAVIGWLL   RK   VE + KLAL
Sbjct: 301 LNEPDKETVVVDIVRFICCAHHPPNEIIQSDIVPRWAVIGWLLTTFRKKSCVEANAKLAL 360

Query: 360 FYDWLFFDGRVDNIMNIEPAMLLMVHCIPKYIDITNALLGFLLHLLDTYDVQHKDVIVKG 419
           FYDWLFFD +VDNIMNIEPA+LLMVH I +Y+++TN LL FLL L+D YD++HKD+IVKG
Sbjct: 361 FYDWLFFDEKVDNIMNIEPAILLMVHSITQYVEMTNTLLEFLLLLVDNYDMEHKDIIVKG 420

Query: 420 VGSAFHSLASKGVIQSLDVLTSCPALSPLLRECLGRLLSDLKLGSSNGFL 469
           V  AF  L SKGVIQSLD+LTSCP LSP L+E L RLLS  K  SS  FL
Sbjct: 421 VSLAFRFLESKGVIQSLDILTSCPTLSPSLKEGLSRLLSSGKPESSKEFL 470


>Medtr4g132950.1 | integrator complex subunit 3 | HC |
           chr4:55616459-55618437 | 20130731
          Length = 86

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 17/79 (21%)

Query: 318 CCAHHPPNEIIQSDIVPRWAVIGWLLKCC-RKNHVENSVKLALFYDWLFFDGRVDNIMNI 376
           C AHHPPNEII SD+VPRWAVIGWLL    RKN+V+ + +L                M I
Sbjct: 18  CSAHHPPNEIILSDVVPRWAVIGWLLTTFRRKNYVDANAEL----------------MKI 61

Query: 377 EPAMLLMVHCIPKYIDITN 395
           EPA+LL VH I +Y D+++
Sbjct: 62  EPAILLTVHSISQYFDMSH 80


>Medtr8g106110.1 | transmembrane protein, putative | LC |
           chr8:44800922-44801146 | 20130731
          Length = 74

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 28/43 (65%)

Query: 112 MVHVSAIGFEPXXXXXXRQILGGDFSDGNLWLCSKMVTLFLEN 154
           M+ VS IG+        RQI+G DFSD NLWLC KMVTL + +
Sbjct: 1   MIRVSWIGYIALLISLLRQIIGSDFSDDNLWLCEKMVTLIITD 43