Miyakogusa Predicted Gene

Lj0g3v0307759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307759.1 tr|I0Z7Y5|I0Z7Y5_9CHLO Tocopherol cyclase
OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,40.17,2e-17,Tocopherol_cycl,Tocopherol cyclase,CUFF.20774.1
         (117 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g110160.1 | tocopherol cyclase | HC | chr3:51129466-511341...   207   1e-54

>Medtr3g110160.1 | tocopherol cyclase | HC | chr3:51129466-51134136
           | 20130731
          Length = 479

 Score =  207 bits (528), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 97/117 (82%), Positives = 109/117 (93%)

Query: 1   MSADNGSYLVELEAKTDDPGTPLRAPTSEAGLSQACKDTCFGILTLKIWERRYDGSKGKI 60
           MSADNG+Y+VELEA T+DPGT LRAPTSEAGLSQACKDTCFGIL LK+WERRYDGSKGKI
Sbjct: 363 MSADNGNYVVELEATTEDPGTTLRAPTSEAGLSQACKDTCFGILKLKLWERRYDGSKGKI 422

Query: 61  ILDVSSDMAALEVGGGPWFSTWKGKTTMPPVIGPALGLPVDLDGIFNAVPLFKPPGL 117
           ILDV+SDMAALEVGGGPWF+TWKGKT+ PPV+  A+GLPVD+DG++N  PLFKPPGL
Sbjct: 423 ILDVTSDMAALEVGGGPWFNTWKGKTSTPPVLSRAIGLPVDVDGLYNLFPLFKPPGL 479