Miyakogusa Predicted Gene

Lj0g3v0293049.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0293049.1 Non Characterized Hit- tr|K4BGB7|K4BGB7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.74,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; coiled-coil,NULL,CUFF.19604.1
         (152 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g015285.1 | nuclear matrix constituent-like protein, putat...   134   3e-32
Medtr6g015285.2 | nuclear matrix constituent-like protein, putat...   134   4e-32
Medtr7g018610.1 | nuclear matrix constituent-like protein | HC |...    79   1e-15
Medtr7g018610.2 | nuclear matrix constituent-like protein | HC |...    79   2e-15

>Medtr6g015285.1 | nuclear matrix constituent-like protein, putative
           | HC | chr6:4963958-4955360 | 20130731
          Length = 1203

 Score =  134 bits (337), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/112 (66%), Positives = 89/112 (79%), Gaps = 11/112 (9%)

Query: 20  IKAEISQQELQICQETENLKLTEEERSEHSRLQLELQQEIEHTRLQKDFLMKEADSLREE 79
           IKAEISQQ+LQI QETENLKL ++ERSEHSRLQLEL+QEIEHTR+QKD +MKEA++LREE
Sbjct: 496 IKAEISQQKLQISQETENLKLIQDERSEHSRLQLELKQEIEHTRMQKDLIMKEAENLREE 555

Query: 80  RQRFEKEWEALDEKKAEVSK-----------EHNEINEEKERLKREKQDIQD 120
           R RFEKEWE LD+K+AE++                 N E+ERLKREKQD++D
Sbjct: 556 RLRFEKEWEELDKKRAEINGEQQEVEKEKEKLRKLKNSEEERLKREKQDMED 607


>Medtr6g015285.2 | nuclear matrix constituent-like protein, putative
           | HC | chr6:4963958-4958128 | 20130731
          Length = 1064

 Score =  134 bits (336), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/112 (66%), Positives = 89/112 (79%), Gaps = 11/112 (9%)

Query: 20  IKAEISQQELQICQETENLKLTEEERSEHSRLQLELQQEIEHTRLQKDFLMKEADSLREE 79
           IKAEISQQ+LQI QETENLKL ++ERSEHSRLQLEL+QEIEHTR+QKD +MKEA++LREE
Sbjct: 496 IKAEISQQKLQISQETENLKLIQDERSEHSRLQLELKQEIEHTRMQKDLIMKEAENLREE 555

Query: 80  RQRFEKEWEALDEKKAEVSK-----------EHNEINEEKERLKREKQDIQD 120
           R RFEKEWE LD+K+AE++                 N E+ERLKREKQD++D
Sbjct: 556 RLRFEKEWEELDKKRAEINGEQQEVEKEKEKLRKLKNSEEERLKREKQDMED 607


>Medtr7g018610.1 | nuclear matrix constituent-like protein | HC |
           chr7:6071545-6078552 | 20130731
          Length = 1177

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 71/104 (68%), Gaps = 13/104 (12%)

Query: 29  LQICQETENLKLTEEERSEHSRLQLELQQEIEHTRLQKDFLMKEADSLREERQRFEKEWE 88
           L+I +ET  L++TEEERSE+ RLQ +L+ EI+  R QK+ LMKEAD LR++++ FE+EW+
Sbjct: 463 LRIKEETNRLQVTEEERSEYIRLQSQLKHEIDQYRQQKELLMKEADDLRQQKETFEREWD 522

Query: 89  ALDEKKAEVSKEHNEI------------NEEKERLKREKQDIQD 120
            LD K+A+V KE   +            NEE ERLK+EKQ  +D
Sbjct: 523 ELDLKRADVEKELKNVLQQKEEILKLQQNEE-ERLKKEKQATED 565


>Medtr7g018610.2 | nuclear matrix constituent-like protein | HC |
           chr7:6071525-6078643 | 20130731
          Length = 1175

 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 71/104 (68%), Gaps = 13/104 (12%)

Query: 29  LQICQETENLKLTEEERSEHSRLQLELQQEIEHTRLQKDFLMKEADSLREERQRFEKEWE 88
           L+I +ET  L++TEEERSE+ RLQ +L+ EI+  R QK+ LMKEAD LR++++ FE+EW+
Sbjct: 463 LRIKEETNRLQVTEEERSEYIRLQSQLKHEIDQYRQQKELLMKEADDLRQQKETFEREWD 522

Query: 89  ALDEKKAEVSKEHNEI------------NEEKERLKREKQDIQD 120
            LD K+A+V KE   +            NEE ERLK+EKQ  +D
Sbjct: 523 ELDLKRADVEKELKNVLQQKEEILKLQQNEE-ERLKKEKQATED 565