Miyakogusa Predicted Gene

Lj0g3v0292639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0292639.1 CUFF.19573.1
         (83 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g072310.1 | nucleotide-diphospho-sugar transferase family ...   155   7e-39
Medtr5g025590.1 | nucleotide-diphospho-sugar transferase family ...   142   7e-35

>Medtr8g072310.1 | nucleotide-diphospho-sugar transferase family
           protein | HC | chr8:30559055-30566150 | 20130731
          Length = 637

 Score =  155 bits (393), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 72/82 (87%), Positives = 75/82 (91%)

Query: 1   MKVFSSFKDVKVIKFSSVLDAFTGFADKEREERFRNRVKRYVGIWCCVPDQDPGHIYYDM 60
           MKVFSSFKDVKVIK SSV DAFTGF +KERE+RFRNRVKRYVGIWCC+PD   GHIYYDM
Sbjct: 555 MKVFSSFKDVKVIKLSSVEDAFTGFTNKEREDRFRNRVKRYVGIWCCMPDTPIGHIYYDM 614

Query: 61  YWDEKPGWKAIPPQSPEEDRPP 82
           YWDEKPGWKAIPPQSPEED PP
Sbjct: 615 YWDEKPGWKAIPPQSPEEDHPP 636


>Medtr5g025590.1 | nucleotide-diphospho-sugar transferase family
           protein | HC | chr5:10393372-10386583 | 20130731
          Length = 688

 Score =  142 bits (358), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 64/82 (78%), Positives = 70/82 (85%)

Query: 1   MKVFSSFKDVKVIKFSSVLDAFTGFADKEREERFRNRVKRYVGIWCCVPDQDPGHIYYDM 60
           MKVFSSFKDVKVI+FSS+ DAFTGF DKERE+RFR RVK Y GIWCCV D  PGHIYYD+
Sbjct: 546 MKVFSSFKDVKVIQFSSMQDAFTGFKDKEREDRFRKRVKHYTGIWCCVTDHTPGHIYYDI 605

Query: 61  YWDEKPGWKAIPPQSPEEDRPP 82
           YWDEKPGWK IPPQ+  +D PP
Sbjct: 606 YWDEKPGWKPIPPQTSADDHPP 627