Miyakogusa Predicted Gene

Lj0g3v0278599.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0278599.2 Non Characterized Hit- tr|G8A2L6|G8A2L6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,41.22,0.0000000000003,seg,NULL,CUFF.18527.2
         (131 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g446520.1 | hypothetical protein | HC | chr8:18201282-1820...    57   4e-09

>Medtr8g446520.1 | hypothetical protein | HC |
           chr8:18201282-18201885 | 20130731
          Length = 104

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 60/131 (45%), Gaps = 27/131 (20%)

Query: 1   MYXXXXXXXXXXXXXACSARPLAEAEEASSSTQINTSVNVSAENVKKQLLKSNGGVTTED 60
           MY              C++R L   ++    TQIN S    +ENV+K  LKSNG   T D
Sbjct: 1   MYLQLCIFILLLSLNVCTSRTLLGVKD----TQINIS-EKESENVEKLPLKSNGATKT-D 54

Query: 61  IKVKNDFGAEREDRSKHMKKVNVKSTEFEDLVPMKLADSVSWTVPHSKKDHDPDQFYSDY 120
           IKV+N+               N+   +        +   +S   PH K+  +P  FYSDY
Sbjct: 55  IKVRNN---------------NIGVVQVH-----HIKQEISDHDPHRKEGKNPG-FYSDY 93

Query: 121 SRPTTRPPSHN 131
           SRP TRPPSHN
Sbjct: 94  SRPRTRPPSHN 104