Miyakogusa Predicted Gene

Lj0g3v0259039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0259039.1 Non Characterized Hit- tr|K3Y8P8|K3Y8P8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si010590,38.89,0.0000001,seg,NULL,CUFF.17053.1
         (436 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0007s0220.1 | kinase superfamily protein | HC | scaffold000...   411   e-115
Medtr7g020870.1 | myb/SANT-like DNA-binding domain protein | HC ...    50   4e-06
Medtr7g020870.2 | myb/SANT-like DNA-binding domain protein | HC ...    50   5e-06

>Medtr0007s0220.1 | kinase superfamily protein | HC |
           scaffold0007:149553-154087 | 20130731
          Length = 1008

 Score =  411 bits (1056), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/393 (60%), Positives = 265/393 (67%), Gaps = 23/393 (5%)

Query: 54  SGGSPFISSPLYVPSG-ASSSPFEQQFET-LNSKRPRYSGQWXXXXXXXXXXXXXXXXMA 111
           SG +PFIS+PLYV SG ASSSPFE QFET L +KRPRYSGQW                  
Sbjct: 60  SGTNPFISTPLYVSSGGASSSPFETQFETSLTTKRPRYSGQWKLLPSPTQQQKQPQITNI 119

Query: 112 MLPV-EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSVGSGQEGNNKQEGEQ-V 169
           + P  E                                    S    QEGN  QE EQ V
Sbjct: 120 LNPTTESKSTTPSPSNLPQQQPQTTPLAASSSETTSSQSHDHSPMPCQEGNRLQELEQQV 179

Query: 170 HQQLRKGKYVSPVWKPNEMLWLARAWKDQYQGGSDGSTSSRAEQQQQAEFGIGITRGKTR 229
           HQQLRKGKYVSPVWKPNEMLWLARAWK+QYQ  S+  TSSR EQ+      +G++RGKTR
Sbjct: 180 HQQLRKGKYVSPVWKPNEMLWLARAWKEQYQTSSE--TSSRTEQE------MGMSRGKTR 231

Query: 230 ADKDREVADFLRRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGERDHIGKSYFRLSPYE 289
           ADKD+EVA+FL +HGVNRDAKTAGTKWDNMLGEFRKVYEWERGGER+ +GKSYFRLSPYE
Sbjct: 232 ADKDKEVAEFLNKHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQVGKSYFRLSPYE 291

Query: 290 RKLHRLPASFDEEVFEELSQFMGSRMRSSTHGRAGSSF------GDEAXXXXXXXXXXXF 343
           RKLHRLPASFDEEVFEELSQFMGSRMRSS  G  G          DEA           F
Sbjct: 292 RKLHRLPASFDEEVFEELSQFMGSRMRSSHGGGGGGRVGSSFVSCDEA-RTRSLPPPRPF 350

Query: 344 KEDEMTPFSGRTKQISMTSGGDQAFFHGHRGSSFLGLDTLLDIXXXXXXXXCKELRRIGK 403
           K+D++ P S RTKQ++MTSGG + FFHGHRG + LGLD+L++I         KELRRIGK
Sbjct: 351 KDDDL-PLSARTKQLAMTSGGGEPFFHGHRG-NILGLDSLMEISTPSSSS--KELRRIGK 406

Query: 404 IRMTWEESVSLWGEEGEIHRGRVRLQGLSFLNA 436
           IRM WEESVSLWGEEGE+HRGR+R+Q  SFL+A
Sbjct: 407 IRMVWEESVSLWGEEGEVHRGRIRVQNSSFLHA 439


>Medtr7g020870.1 | myb/SANT-like DNA-binding domain protein | HC |
           chr7:6527508-6523213 | 20130731
          Length = 341

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)

Query: 236 VADFLRRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGERDHIGKSYFRLSPYERKLHRL 295
           V+ + ++HGVNR       +W N+ G+++K+ EWE    RD   +S++ +    R+  +L
Sbjct: 79  VSSYCKKHGVNRGPIQCRKRWSNLAGDYKKIKEWE-SQVRDET-ESFWLMRNDLRRERKL 136

Query: 296 PASFDEEVFEEL 307
           P  FD+EV+E L
Sbjct: 137 PGYFDKEVYEIL 148


>Medtr7g020870.2 | myb/SANT-like DNA-binding domain protein | HC |
           chr7:6527499-6523901 | 20130731
          Length = 245

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)

Query: 236 VADFLRRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGERDHIGKSYFRLSPYERKLHRL 295
           V+ + ++HGVNR       +W N+ G+++K+ EWE    RD   +S++ +    R+  +L
Sbjct: 79  VSSYCKKHGVNRGPIQCRKRWSNLAGDYKKIKEWE-SQVRDET-ESFWLMRNDLRRERKL 136

Query: 296 PASFDEEVFEEL 307
           P  FD+EV+E L
Sbjct: 137 PGYFDKEVYEIL 148