Miyakogusa Predicted Gene

Lj0g3v0237279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0237279.1 Non Characterized Hit- tr|J3MXE3|J3MXE3_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB09G1,46.36,5e-17,
,CUFF.15565.1
         (153 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g108590.1 | transcription regulator/zinc ion-binding prote...   219   8e-58

>Medtr4g108590.1 | transcription regulator/zinc ion-binding protein
           | HC | chr4:44992689-44988489 | 20130731
          Length = 433

 Score =  219 bits (558), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 113/158 (71%), Positives = 126/158 (79%), Gaps = 7/158 (4%)

Query: 1   MESAGEWLEKALVELCSKIETGLGLGLDEEIIKGLVSYCNLAEPRDAKEYLDNIIGQEAG 60
           ME+AG+WLEKALVELC+KIETGLGLGLDEEIIKGLVSYC+LA+PRDAKEYLDNIIGQE G
Sbjct: 1   METAGQWLEKALVELCAKIETGLGLGLDEEIIKGLVSYCDLAQPRDAKEYLDNIIGQEVG 60

Query: 61  KAVIEEYLQKRGYSESSASSNVPTTKLSAYVKPSSADISAIGSKKSNRAPKAVAVRGQDA 120
           K+VIEEYL++RG+SE S  SNVPTT L AYVKP S + S  GSKK  R PK V VRG  A
Sbjct: 61  KSVIEEYLRRRGHSEFSTKSNVPTTTLHAYVKPPSVETSTSGSKK--RTPKTVTVRGDHA 118

Query: 121 VPNKNEV-----NQTPASGSESRASQNGNQVSSKKKKA 153
            PNK  V     ++ PA+ SESR S   NQVSSKKKKA
Sbjct: 119 EPNKIAVGSSQGSEIPATSSESRTSHKVNQVSSKKKKA 156