Miyakogusa Predicted Gene

Lj0g3v0231269.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0231269.1 tr|Q8S9I4|Q8S9I4_ARATH AT4g02720/T10P11_1
OS=Arabidopsis thaliana GN=At4g02720 PE=2 SV=1,58.14,2e-18,seg,NULL;
NF-KAPPA B ACTIVATING PROTEIN,Protein of unknown function DUF926;
SynMuv_product,Protein o,CUFF.15245.1
         (463 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028640.1 | Ras-induced vulval development antagonist prot...   173   3e-43

>Medtr8g028640.1 | Ras-induced vulval development antagonist protein
           | HC | chr8:10997568-10992334 | 20130731
          Length = 486

 Score =  173 bits (439), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/133 (72%), Positives = 106/133 (79%), Gaps = 8/133 (6%)

Query: 339 SEGLEE----NDSGDAKGKAVVDEVQVTDI--INAEG-KLKESFDSQEIPDLDN-EPVVG 390
           SEG EE    +DS  AK    +D+V    +  +NAE  KLKE F+SQ+ P LD+ EP VG
Sbjct: 296 SEGSEEIELGSDSAVAKINEEIDDVDEEKMAEMNAEALKLKELFESQKKPALDDDEPPVG 355

Query: 391 PMPLPKPEGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSADEIQKFESLGYVMSG 450
           PMPLP+ EGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSA+EI KFE LGYVMSG
Sbjct: 356 PMPLPRAEGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSAEEISKFEELGYVMSG 415

Query: 451 SRHQRMNAIRIRK 463
           SRHQRMNAIRIRK
Sbjct: 416 SRHQRMNAIRIRK 428



 Score =  173 bits (438), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/174 (60%), Positives = 120/174 (68%), Gaps = 18/174 (10%)

Query: 1   MGRPSSTIEIPNDRHR----RRTPDSDISDDYRPR-RRSPNYDSYDXXXXXXXXXXXXXX 55
           M R SSTIE P  RHR    RRTPDSD+S+D RPR RRSP+YDSYD              
Sbjct: 1   MARLSSTIETPYQRHRHNDRRRTPDSDVSND-RPRYRRSPSYDSYDDRHTDRHRRRSISP 59

Query: 56  XXXT-----NGNTNDNALPKKFGRRN-GSYLDRDGKDWQRSESESDEELKGLSFEEYRRL 109
                    NGN+N N LPKKFG RN GSYLDR+  D +R+ESESDEELKGLS+EEYRRL
Sbjct: 60  ENRNPRHHDNGNSNGNHLPKKFGHRNNGSYLDRN--DSRRNESESDEELKGLSYEEYRRL 117

Query: 110 KRQKMRKALKHCIWNVTPSPPRNENEDAEDDFKAEEVPEKFGDGGDLKIEKEVK 163
           KRQKMRK+LKHCIWNVTPSPPR EN+D ED  K EE+ E      D+K +KE+K
Sbjct: 118 KRQKMRKSLKHCIWNVTPSPPRRENDDLEDYGKPEEISEII----DVKKDKEIK 167