Miyakogusa Predicted Gene

Lj0g3v0207399.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0207399.1 Non Characterized Hit- tr|I1JKV6|I1JKV6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,60.34,0,UbiA,UbiA prenyltransferase family; seg,NULL;
BACTERIOCHLOROPHYLL SYNTHASE,NULL; PRENYLTRANSFERASES,,CUFF.13290.1
         (239 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g127800.3 | homogentisate phytyltransferase | HC | chr4:53...   244   4e-65
Medtr4g127800.1 | homogentisate phytyltransferase | HC | chr4:53...   244   4e-65
Medtr4g127800.2 | homogentisate phytyltransferase | HC | chr4:53...   244   4e-65
Medtr1g054305.1 | homogentisate phytyltransferase | HC | chr1:23...    79   3e-15

>Medtr4g127800.3 | homogentisate phytyltransferase | HC |
           chr4:53138714-53131274 | 20130731
          Length = 411

 Score =  244 bits (624), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 130/237 (54%), Positives = 164/237 (69%)

Query: 1   MVGIISSTIATSLLTVEKLSDISPLFFTNVLKALVLYLPMCIYIGGVNQLFDVEIDKINK 60
           ++G   S I+ SLL  EKLSDISPLFFT VL+A+V  L M IYI G+NQL DVEIDKINK
Sbjct: 127 VIGTALSIISVSLLAAEKLSDISPLFFTGVLEAVVAALFMNIYIVGLNQLSDVEIDKINK 186

Query: 61  PYLPLASGKLSYSAGVIIVAFSLIMSFXXXXXXXXXXXXXXXVAYSTVGFVYSANVPLLR 120
           PYLPLASG+ S++ G IIV  S I+SF                    +G  YS NVPLLR
Sbjct: 187 PYLPLASGEYSFATGAIIVVSSSILSFWLAWIVGSWPLFWALFISFVLGTAYSINVPLLR 246

Query: 121 WKGHPVLAAICLVSLTALILPITIFFHFQTYVFKRTTIFWRPLIFVVAFTSVYFVGVSLG 180
           WK   VLAA+C++S+ A+I+ +  F H QT+V+KR  +F RPLIF  AF S + V ++L 
Sbjct: 247 WKRFAVLAAMCILSVRAVIVQLAFFLHMQTFVYKRPVVFSRPLIFATAFMSFFSVVIALF 306

Query: 181 KDIPDMEGDKAFGVNSFAVRFGTKRAFWLSVTLIETAFGIALFTAATSSYLWSKVIT 237
           KDIPD+EGDK FG+ SF+VR G KR FW+ VTL+E A+G++L   ATSS LWSK++T
Sbjct: 307 KDIPDIEGDKIFGIQSFSVRLGQKRVFWICVTLLELAYGVSLVVGATSSCLWSKIVT 363


>Medtr4g127800.1 | homogentisate phytyltransferase | HC |
           chr4:53139111-53131266 | 20130731
          Length = 411

 Score =  244 bits (624), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 130/237 (54%), Positives = 164/237 (69%)

Query: 1   MVGIISSTIATSLLTVEKLSDISPLFFTNVLKALVLYLPMCIYIGGVNQLFDVEIDKINK 60
           ++G   S I+ SLL  EKLSDISPLFFT VL+A+V  L M IYI G+NQL DVEIDKINK
Sbjct: 127 VIGTALSIISVSLLAAEKLSDISPLFFTGVLEAVVAALFMNIYIVGLNQLSDVEIDKINK 186

Query: 61  PYLPLASGKLSYSAGVIIVAFSLIMSFXXXXXXXXXXXXXXXVAYSTVGFVYSANVPLLR 120
           PYLPLASG+ S++ G IIV  S I+SF                    +G  YS NVPLLR
Sbjct: 187 PYLPLASGEYSFATGAIIVVSSSILSFWLAWIVGSWPLFWALFISFVLGTAYSINVPLLR 246

Query: 121 WKGHPVLAAICLVSLTALILPITIFFHFQTYVFKRTTIFWRPLIFVVAFTSVYFVGVSLG 180
           WK   VLAA+C++S+ A+I+ +  F H QT+V+KR  +F RPLIF  AF S + V ++L 
Sbjct: 247 WKRFAVLAAMCILSVRAVIVQLAFFLHMQTFVYKRPVVFSRPLIFATAFMSFFSVVIALF 306

Query: 181 KDIPDMEGDKAFGVNSFAVRFGTKRAFWLSVTLIETAFGIALFTAATSSYLWSKVIT 237
           KDIPD+EGDK FG+ SF+VR G KR FW+ VTL+E A+G++L   ATSS LWSK++T
Sbjct: 307 KDIPDIEGDKIFGIQSFSVRLGQKRVFWICVTLLELAYGVSLVVGATSSCLWSKIVT 363


>Medtr4g127800.2 | homogentisate phytyltransferase | HC |
           chr4:53138796-53131274 | 20130731
          Length = 411

 Score =  244 bits (624), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 130/237 (54%), Positives = 164/237 (69%)

Query: 1   MVGIISSTIATSLLTVEKLSDISPLFFTNVLKALVLYLPMCIYIGGVNQLFDVEIDKINK 60
           ++G   S I+ SLL  EKLSDISPLFFT VL+A+V  L M IYI G+NQL DVEIDKINK
Sbjct: 127 VIGTALSIISVSLLAAEKLSDISPLFFTGVLEAVVAALFMNIYIVGLNQLSDVEIDKINK 186

Query: 61  PYLPLASGKLSYSAGVIIVAFSLIMSFXXXXXXXXXXXXXXXVAYSTVGFVYSANVPLLR 120
           PYLPLASG+ S++ G IIV  S I+SF                    +G  YS NVPLLR
Sbjct: 187 PYLPLASGEYSFATGAIIVVSSSILSFWLAWIVGSWPLFWALFISFVLGTAYSINVPLLR 246

Query: 121 WKGHPVLAAICLVSLTALILPITIFFHFQTYVFKRTTIFWRPLIFVVAFTSVYFVGVSLG 180
           WK   VLAA+C++S+ A+I+ +  F H QT+V+KR  +F RPLIF  AF S + V ++L 
Sbjct: 247 WKRFAVLAAMCILSVRAVIVQLAFFLHMQTFVYKRPVVFSRPLIFATAFMSFFSVVIALF 306

Query: 181 KDIPDMEGDKAFGVNSFAVRFGTKRAFWLSVTLIETAFGIALFTAATSSYLWSKVIT 237
           KDIPD+EGDK FG+ SF+VR G KR FW+ VTL+E A+G++L   ATSS LWSK++T
Sbjct: 307 KDIPDIEGDKIFGIQSFSVRLGQKRVFWICVTLLELAYGVSLVVGATSSCLWSKIVT 363


>Medtr1g054305.1 | homogentisate phytyltransferase | HC |
           chr1:23377123-23369732 | 20130731
          Length = 392

 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 5/164 (3%)

Query: 43  YIGGVNQLFDVEIDKINKPYLPLASGKLSYSAGVIIVAFSLIMSFXXXXXXXXXXXXXXX 102
           YI G+NQ++D+ IDK+NKPYLP+A+G LS  +   +V F                     
Sbjct: 152 YIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWYLVIFFAAAGLLTVGLNFGSFIFSLY 211

Query: 103 VAYSTVGFVYSANVPLLRWKGHPVLAAICLVSLTALILPITIFFHFQTYVFKRTTIFW-R 161
                +G +YS  VP LR K  PV A + + ++   +L   ++  + T         W  
Sbjct: 212 SFGLFLGTIYS--VPPLRMKRFPVAAFLIIATVRGFLLNFGVY--YATRAALGLAFEWSS 267

Query: 162 PLIFVVAFTSVYFVGVSLGKDIPDMEGDKAFGVNSFAVRFGTKR 205
           P++F+  F + + + +++ KD+PD+EGD+ + +++FA + G + 
Sbjct: 268 PVVFITTFVTFFALVIAITKDLPDVEGDRRYQISTFATKLGVRN 311