Miyakogusa Predicted Gene

Lj0g3v0206449.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0206449.2 Non Characterized Hit- tr|B6VCR9|B6VCR9_TRIMO
Putative expressed protein (Fragment) OS=Triticum
mono,64.94,3e-18,coiled-coil,NULL; seg,NULL,CUFF.13214.2
         (461 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g046350.1 | heavy meromyosin-like protein, putative | HC |...   658   0.0  

>Medtr1g046350.1 | heavy meromyosin-like protein, putative | HC |
           chr1:17474020-17462195 | 20130731
          Length = 766

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/469 (73%), Positives = 387/469 (82%), Gaps = 20/469 (4%)

Query: 2   ESSSRRSRPSFLDSLNVTKPSSGSPFPQPLQDSSMYNNLESRSNYLPGSNYFHKPSEETK 61
           ESSSR+ RPSFLDSLNV +PS GSPF QP QD+S +++LES SN   GS YFHKPSE+TK
Sbjct: 309 ESSSRKLRPSFLDSLNVARPSMGSPFYQPEQDASKFSHLESSSNDTSGSTYFHKPSEDTK 368

Query: 62  IVGHLSDLTTSSPFEHLTDPSVLNSNSQDTLMTNARENGMEKKHDYYSPSQNEDFAALEQ 121
             G  S+LT++  F          SN+QDT M +A+ENGMEKKHD+YS SQNEDF+ LEQ
Sbjct: 369 SGGLFSNLTSAPVF----------SNNQDTPMISAKENGMEKKHDFYSSSQNEDFSTLEQ 418

Query: 122 HIEDLTQEKFSLQXXXXXXXXXXXXXXTENSSLTDNYNQQRSVVNQLKADMEVLQEDIKT 181
           HIEDLTQEKFSLQ              TENSSLT+NYN QRSVVNQLK++ME L+++IK+
Sbjct: 419 HIEDLTQEKFSLQRALEASRVLAESLATENSSLTENYNHQRSVVNQLKSEMENLKQEIKS 478

Query: 182 HLDQFESIRSEYANAQLECNAADERAKLLASEVIGLEEKALRLRSSELKLEKQLENAQAE 241
            L + E+I+SEY N QLECNAADERAKLLASEVIGLEEKALRLRS+ELKLEKQLE  QAE
Sbjct: 479 QLVELEAIKSEYTNVQLECNAADERAKLLASEVIGLEEKALRLRSNELKLEKQLEIEQAE 538

Query: 242 LSSYRKKMSTLDKERRDLQSTIDALQEEKKVLLSKLRKASGIGKSIESQTSKRDVSTSTE 301
           +SSYRKKMS+L+K+RRDLQSTIDALQEEKK+LLSK+RK SG GK  E++TSKRD STSTE
Sbjct: 539 ISSYRKKMSSLEKDRRDLQSTIDALQEEKKMLLSKVRKGSGFGKP-ENKTSKRDGSTSTE 597

Query: 302 DIASEDPALNTSGSGINDN-----AEPSS-SLVAETRHSSFGVSPVNIPHDQMRMIENIN 355
           D+ SEDPA N+S + INDN     AEPSS S+V ET HSSFGVSPVNIPHDQMR+IENIN
Sbjct: 598 DLVSEDPASNSSNTEINDNAAVRDAEPSSLSVVPETTHSSFGVSPVNIPHDQMRVIENIN 657

Query: 356 ALISELASEKEELVKALASESSECSRMKEINRELSRKLEVQTQRLELLTAQNMVT---EN 412
           ALISELA EKEEL+K+LA ESSE SRMKEIN+ELSRKLEVQTQRLELLT QNMV    EN
Sbjct: 658 ALISELALEKEELMKSLAFESSESSRMKEINKELSRKLEVQTQRLELLTTQNMVNGNIEN 717

Query: 413 ISAKEPDSRVMYENTPYADEGDEVVERVLGWIMKLFPGGPSKRRTSKLL 461
           IS K+PDSRV YEN PYADEGDEVVERVLGWIMKLFPGGPSKRRTSKLL
Sbjct: 718 ISTKQPDSRVTYENIPYADEGDEVVERVLGWIMKLFPGGPSKRRTSKLL 766