Miyakogusa Predicted Gene

Lj0g3v0203109.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0203109.1 Non Characterized Hit- tr|I1NFK6|I1NFK6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,44.83,1e-17,seg,NULL,CUFF.12936.1
         (142 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g110460.1 | myb transcription factor | HC | chr1:49849320-...   106   6e-24

>Medtr1g110460.1 | myb transcription factor | HC |
           chr1:49849320-49847994 | 20130731
          Length = 311

 Score =  106 bits (265), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/118 (52%), Positives = 78/118 (66%), Gaps = 6/118 (5%)

Query: 28  PSSPPQREFIDAAS--HLSTVXXXXXXXXXXXXXXXXLQEISQSPICAPNVFESNGYSYP 85
           PSS PQR FIDA++  HLST+                  E S+S   APNVFE+N Y+ P
Sbjct: 197 PSSYPQRGFIDASNGNHLSTMSTSFNNPSLDFFQFSQPLENSKS---APNVFENNFYNGP 253

Query: 86  NQESSYVDN-NSYGLEGLNLDPLPTMENYDISQFDFQSVGSGWMLENMAEALWNMDAM 142
            Q++  +D+ N+YGLEGLNLDP+ +ME YD SQFD Q+  SGWML+NMA  LWNMD+M
Sbjct: 254 IQDNFCIDDTNNYGLEGLNLDPMSSMETYDFSQFDLQTTESGWMLDNMANTLWNMDSM 311