Miyakogusa Predicted Gene
- Lj0g3v0185899.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0185899.2 tr|A9TLG3|A9TLG3_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,48.31,3e-18,seg,NULL; mTERF,Mitochodrial transcription
termination factor-related; SUBFAMILY NOT NAMED,NULL; CGI,CUFF.11831.2
(297 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g034600.1 | transcription termination factor family protei... 393 e-109
Medtr2g034600.3 | transcription termination factor family protei... 392 e-109
Medtr2g034600.2 | transcription termination factor family protei... 391 e-109
Medtr1g115415.1 | transcription termination factor family protei... 69 5e-12
Medtr8g105560.1 | transcription termination factor family protei... 67 1e-11
Medtr5g094610.1 | transcription termination factor family protei... 66 3e-11
Medtr4g070060.1 | transcription termination factor family protei... 65 1e-10
Medtr5g068860.1 | transcription termination factor family protei... 64 1e-10
Medtr4g084630.1 | transcription termination factor family protei... 62 6e-10
Medtr6g003960.1 | transcription termination factor family protei... 54 2e-07
Medtr4g119580.1 | mTERF protein | HC | chr4:49563660-49561008 | ... 50 2e-06
>Medtr2g034600.1 | transcription termination factor family protein |
HC | chr2:13233091-13236843 | 20130731
Length = 557
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/295 (68%), Positives = 228/295 (77%), Gaps = 3/295 (1%)
Query: 2 MKAFSSFQPPQHFPCXXXXXXXXXXXXQLSFHAKAFYCQAKSGIDGSLNLRVMPPTLLXX 61
MK FSS QPP +F QL + F+ Q KS D SL+++++PPTLL
Sbjct: 85 MKTFSSIQPPHNFHSTLFFSYTSIRT-QLPSSTRVFFSQEKSDTDESLSVKLLPPTLLAA 143
Query: 62 XXXXXXXVLCLFFKKQGLSNAVAARTINKSDLFIDHLVSKLHSKHKSRYLAGRELTTLEI 121
VL LF KK+GLSNA AARTINKSD FIDHL+SKLHSKHK+ YL+GRELTTLEI
Sbjct: 144 EKEEAKAVLTLFLKKRGLSNANAARTINKSDPFIDHLLSKLHSKHKTWYLSGRELTTLEI 203
Query: 122 RDALIPYLESLLEEHGDVLGDLVESYPNPPVKEKS--TLAIPTTSNVVDSKKLKAVSRVD 179
RDALI YLESL EEHG++L D VE+YPNPPVK+KS + P S VDSKK+KAVSRV
Sbjct: 204 RDALISYLESLYEEHGEILVDAVENYPNPPVKDKSDAPIPPPNPSPAVDSKKVKAVSRVS 263
Query: 180 EIDPAAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKE 239
IDPA G LRPHI YLMELGM+ +QVRSI+RRFPAFAYYSLEGKIKPVVEFFLELGVPKE
Sbjct: 264 GIDPAEGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKE 323
Query: 240 NIATILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRR 294
I ILTKRPQLCGISLS+NLKPTMKF ES G+DK+QW KVIYRFPALLTYS ++
Sbjct: 324 KIIIILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQK 378
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 187 KLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILT 246
L+P + + LG+D EQ +I RFPA YS + KI ++F E GV +ENI ILT
Sbjct: 343 NLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQ-KINESLDFLREFGVSEENIGKILT 401
Query: 247 KRPQLCGISLSENLKPTMKFLESFGID 273
+ P + S+ +NL+PT + S G+D
Sbjct: 402 RCPTIVSYSVEDNLRPTAMYFRSLGVD 428
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 184 AAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIAT 243
+ K+ + +L E G+ E + I+ R P YS+E ++P +F LGV ++
Sbjct: 375 STQKINESLDFLREFGVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGV---DVGL 431
Query: 244 ILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
+L PQ G+S+ N+KP +F G ++ +I R+ L T+SL
Sbjct: 432 LLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIKRYGMLYTFSL 480
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 187 KLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILT 246
LRP +Y LG+D V ++ P S+E IKPV +FFLE G E I ++
Sbjct: 414 NLRPTAMYFRSLGVD---VGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIK 470
Query: 247 KRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRREYR 297
+ L SL+ENL P + + K + + +FP YSL + +
Sbjct: 471 RYGMLYTFSLTENLMPKWDYFLTMDYPKSE----LVKFPQFFGYSLEQRIK 517
>Medtr2g034600.3 | transcription termination factor family protein |
HC | chr2:13233799-13236843 | 20130731
Length = 496
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/298 (67%), Positives = 228/298 (76%), Gaps = 5/298 (1%)
Query: 2 MKAFSSFQPPQHFPCXXXXXXXXX---XXXQLSFHAKAFYCQAKSGIDGSLNLRVMPPTL 58
MK FSS QPP +F QL + F+ Q KS D SL+++++PPTL
Sbjct: 20 MKTFSSIQPPHNFHSTLFFSYTSIRFCIRTQLPSSTRVFFSQEKSDTDESLSVKLLPPTL 79
Query: 59 LXXXXXXXXXVLCLFFKKQGLSNAVAARTINKSDLFIDHLVSKLHSKHKSRYLAGRELTT 118
L VL LF KK+GLSNA AARTINKSD FIDHL+SKLHSKHK+ YL+GRELTT
Sbjct: 80 LAAEKEEAKAVLTLFLKKRGLSNANAARTINKSDPFIDHLLSKLHSKHKTWYLSGRELTT 139
Query: 119 LEIRDALIPYLESLLEEHGDVLGDLVESYPNPPVKEKS--TLAIPTTSNVVDSKKLKAVS 176
LEIRDALI YLESL EEHG++L D VE+YPNPPVK+KS + P S VDSKK+KAVS
Sbjct: 140 LEIRDALISYLESLYEEHGEILVDAVENYPNPPVKDKSDAPIPPPNPSPAVDSKKVKAVS 199
Query: 177 RVDEIDPAAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGV 236
RV IDPA G LRPHI YLMELGM+ +QVRSI+RRFPAFAYYSLEGKIKPVVEFFLELGV
Sbjct: 200 RVSGIDPAEGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGV 259
Query: 237 PKENIATILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRR 294
PKE I ILTKRPQLCGISLS+NLKPTMKF ES G+DK+QW KVIYRFPALLTYS ++
Sbjct: 260 PKEKIIIILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQK 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 185 AGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATI 244
+ L+P + + LG+D EQ +I RFPA YS + KI ++F E GV +ENI I
Sbjct: 280 SKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQ-KINESLDFLREFGVSEENIGKI 338
Query: 245 LTKRPQLCGISLSENLKPTMKFLESFGID 273
LT+ P + S+ +NL+PT + S G+D
Sbjct: 339 LTRCPTIVSYSVEDNLRPTAMYFRSLGVD 367
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 184 AAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIAT 243
+ K+ + +L E G+ E + I+ R P YS+E ++P +F LGV ++
Sbjct: 314 STQKINESLDFLREFGVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGV---DVGL 370
Query: 244 ILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
+L PQ G+S+ N+KP +F G ++ +I R+ L T+SL
Sbjct: 371 LLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIKRYGMLYTFSL 419
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 188 LRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTK 247
LRP +Y LG+D V ++ P S+E IKPV +FFLE G E I ++ +
Sbjct: 354 LRPTAMYFRSLGVD---VGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIKR 410
Query: 248 RPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRREYR 297
L SL+ENL P + + K + + +FP YSL + +
Sbjct: 411 YGMLYTFSLTENLMPKWDYFLTMDYPKSE----LVKFPQFFGYSLEQRIK 456
>Medtr2g034600.2 | transcription termination factor family protein |
HC | chr2:13233091-13236856 | 20130731
Length = 561
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/298 (67%), Positives = 228/298 (76%), Gaps = 5/298 (1%)
Query: 2 MKAFSSFQPPQHFPCXXXXXXXXX---XXXQLSFHAKAFYCQAKSGIDGSLNLRVMPPTL 58
MK FSS QPP +F QL + F+ Q KS D SL+++++PPTL
Sbjct: 85 MKTFSSIQPPHNFHSTLFFSYTSIRFCIRTQLPSSTRVFFSQEKSDTDESLSVKLLPPTL 144
Query: 59 LXXXXXXXXXVLCLFFKKQGLSNAVAARTINKSDLFIDHLVSKLHSKHKSRYLAGRELTT 118
L VL LF KK+GLSNA AARTINKSD FIDHL+SKLHSKHK+ YL+GRELTT
Sbjct: 145 LAAEKEEAKAVLTLFLKKRGLSNANAARTINKSDPFIDHLLSKLHSKHKTWYLSGRELTT 204
Query: 119 LEIRDALIPYLESLLEEHGDVLGDLVESYPNPPVKEKS--TLAIPTTSNVVDSKKLKAVS 176
LEIRDALI YLESL EEHG++L D VE+YPNPPVK+KS + P S VDSKK+KAVS
Sbjct: 205 LEIRDALISYLESLYEEHGEILVDAVENYPNPPVKDKSDAPIPPPNPSPAVDSKKVKAVS 264
Query: 177 RVDEIDPAAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGV 236
RV IDPA G LRPHI YLMELGM+ +QVRSI+RRFPAFAYYSLEGKIKPVVEFFLELGV
Sbjct: 265 RVSGIDPAEGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGV 324
Query: 237 PKENIATILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRR 294
PKE I ILTKRPQLCGISLS+NLKPTMKF ES G+DK+QW KVIYRFPALLTYS ++
Sbjct: 325 PKEKIIIILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQK 382
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 187 KLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILT 246
L+P + + LG+D EQ +I RFPA YS + KI ++F E GV +ENI ILT
Sbjct: 347 NLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQ-KINESLDFLREFGVSEENIGKILT 405
Query: 247 KRPQLCGISLSENLKPTMKFLESFGID 273
+ P + S+ +NL+PT + S G+D
Sbjct: 406 RCPTIVSYSVEDNLRPTAMYFRSLGVD 432
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 184 AAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIAT 243
+ K+ + +L E G+ E + I+ R P YS+E ++P +F LGV ++
Sbjct: 379 STQKINESLDFLREFGVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGV---DVGL 435
Query: 244 ILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
+L PQ G+S+ N+KP +F G ++ +I R+ L T+SL
Sbjct: 436 LLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIKRYGMLYTFSL 484
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 187 KLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILT 246
LRP +Y LG+D V ++ P S+E IKPV +FFLE G E I ++
Sbjct: 418 NLRPTAMYFRSLGVD---VGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIK 474
Query: 247 KRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRREYR 297
+ L SL+ENL P + + K + + +FP YSL + +
Sbjct: 475 RYGMLYTFSLTENLMPKWDYFLTMDYPKSE----LVKFPQFFGYSLEQRIK 521
>Medtr1g115415.1 | transcription termination factor family protein |
HC | chr1:52109146-52107512 | 20130731
Length = 501
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 62/108 (57%)
Query: 186 GKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATIL 245
G + + YL+ +G++ + ++ ++P F + IKP+V++ + LG+PK +A +L
Sbjct: 209 GTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTMIKPLVDYLVNLGLPKRILARML 268
Query: 246 TKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLR 293
KR L G L E +KP + L SFG+ K+ P VI ++P ++ L+
Sbjct: 269 EKRAYLLGYDLEETVKPNVDCLISFGLRKEYLPSVIAQYPLIIGLPLK 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 54/99 (54%)
Query: 190 PHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTKRP 249
P + YL ++G+ ++ I+ +P + S+ ++ PV++F L V K++I +L K P
Sbjct: 141 PVLGYLEKIGISRSKLGEFIKNYPQVLHASVIVELAPVIKFLRGLDVEKDDIGFVLQKYP 200
Query: 250 QLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALL 288
+L G L + ++ +L S G++ + ++ ++P L
Sbjct: 201 ELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFL 239
>Medtr8g105560.1 | transcription termination factor family protein |
HC | chr8:44520352-44517998 | 20130731
Length = 560
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 60/103 (58%)
Query: 186 GKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATIL 245
G + + YL+ +G++ + ++ ++P F + IKP V++ + LG+PK+ +A +L
Sbjct: 156 GTMSTSVAYLVSIGVNPRDIGPMVAQYPYFLGMRVGTMIKPFVDYLVNLGLPKKILARML 215
Query: 246 TKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALL 288
KR L G L E +KP + L SFG+ K+ P VI ++P ++
Sbjct: 216 EKRAYLLGYVLEETMKPNVDCLISFGLRKECLPSVIAQYPQII 258
>Medtr5g094610.1 | transcription termination factor family protein |
HC | chr5:41344877-41348219 | 20130731
Length = 503
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 192 IVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTKRPQL 251
I YLM LG+ + +R I+ R P Y++E +K V F + LGVP I I+ P L
Sbjct: 230 IDYLMSLGVKHKDIRRILLRQPQILEYTVENNLKTHVAFLMGLGVPSTKIGQIIASTPSL 289
Query: 252 CGISLSENLKPTMKFL-ESFGIDKKQWPKVIYRFPALL 288
S+ ++LKPT+++L E GI +K KVI P +L
Sbjct: 290 FSYSVEKSLKPTVRYLIEEVGIKEKDLGKVIQLSPQIL 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 38/145 (26%)
Query: 186 GKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFL------------- 232
L+ H+ +LM LG+ ++ II P+ YS+E +KP V + +
Sbjct: 260 NNLKTHVAFLMGLGVPSTKIGQIIASTPSLFSYSVEKSLKPTVRYLIEEVGIKEKDLGKV 319
Query: 233 -------------------------ELGVPKENIATILTKRPQLCGISLSENLKPTMKFL 267
EL PKE+I ++TK PQL S+ + L P + FL
Sbjct: 320 IQLSPQILVQRIDISWNTRLMFLNKELDAPKESIVKMVTKHPQLLHYSIDDGLLPRINFL 379
Query: 268 ESFGIDKKQWPKVIYRFPALLTYSL 292
S G+ K++ +L+ SL
Sbjct: 380 RSIGMKNADILKILTSLTQVLSLSL 404
>Medtr4g070060.1 | transcription termination factor family protein |
HC | chr4:26370303-26365871 | 20130731
Length = 617
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 190 PHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFL-ELGVPKENIATILTKR 248
P + + +LG+ + + ++ +FP YSL KI+PVV F + + GV +ENI ++
Sbjct: 419 PKVKFFQDLGVRNDGIAKMLVKFPTLLTYSLYKKIRPVVIFLMTKAGVTEENIPKVIALG 478
Query: 249 PQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
P+L G S+ L+ +K+ S GI +Q ++I FP LL Y++
Sbjct: 479 PELLGCSIVHKLEGNVKYYLSLGIRLQQLGEMIADFPMLLRYNI 522
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%)
Query: 194 YLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTKRPQLCG 253
YL E G++ + V ++ P S+E + KP+V++ G+ ++ + +LT +P +
Sbjct: 351 YLKEFGLESKDVGKLLAFRPQLMACSIEEQWKPLVKYLYYYGITRDGMRRMLTIKPMVFC 410
Query: 254 ISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRREYR 297
+ L + P +KF + G+ K++ +FP LLTYSL ++ R
Sbjct: 411 VDLEMTIVPKVKFFQDLGVRNDGIAKMLVKFPTLLTYSLYKKIR 454
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 187 KLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILT 246
+ +P + YL G+ + +R ++ P LE I P V+FF +LGV + IA +L
Sbjct: 380 QWKPLVKYLYYYGITRDGMRRMLTIKPMVFCVDLEMTIVPKVKFFQDLGVRNDGIAKMLV 439
Query: 247 KRPQLCGISLSENLKPTMKFLES-FGIDKKQWPKVIYRFPALLTYSL 292
K P L SL + ++P + FL + G+ ++ PKVI P LL S+
Sbjct: 440 KFPTLLTYSLYKKIRPVVIFLMTKAGVTEENIPKVIALGPELLGCSI 486
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 184 AAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIAT 243
+ G+L + YL G+ E + ++ R P YSLE ++K V+F+L++G+ ++ T
Sbjct: 270 SDGELDEIVDYLEFNGVRREWMGYVVSRCPKLLSYSLE-EVKTRVQFYLDMGLDAKDFGT 328
Query: 244 ILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRREYR 297
++ P+ G E + + +L+ FG++ K K++ P L+ S+ +++
Sbjct: 329 MVFDFPKALGHYTLEEMNRKVDYLKEFGLESKDVGKLLAFRPQLMACSIEEQWK 382
>Medtr5g068860.1 | transcription termination factor family protein |
HC | chr5:29165945-29163659 | 20130731
Length = 530
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 186 GKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATIL 245
G + + YL+ +G+ ++ I+ RFP + IKP VE+ LG+P+ IA ++
Sbjct: 241 GTMSTSVAYLIGIGVGRRELGGILTRFPEILGMRVGRVIKPFVEYLESLGIPRLAIARLI 300
Query: 246 TKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
+P + G L E +KP +K LE F + + +I ++P ++ L
Sbjct: 301 ETQPYILGFDLDEKVKPNVKSLEEFNVRETSLASIIAQYPDIIGTDL 347
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 199 GMDI--EQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTKRPQLCGISL 256
GMDI + + ++ R+P + LEG + V + + +GV + + ILT+ P++ G+ +
Sbjct: 216 GMDIKPDDIPRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRRELGGILTRFPEILGMRV 275
Query: 257 SENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
+KP +++LES GI + ++I P +L + L
Sbjct: 276 GRVIKPFVEYLESLGIPRLAIARLIETQPYILGFDL 311
>Medtr4g084630.1 | transcription termination factor family protein |
HC | chr4:32962573-32960937 | 20130731
Length = 332
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 187 KLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILT 246
K+ P + L L +V S I +FP S+E K+ P++ FF LGVP+++I IL
Sbjct: 76 KIVPMVECLNTLATKPHEVASAIAKFPQILSCSVEEKLCPLLAFFQTLGVPEKHIGKILL 135
Query: 247 KRPQLCGISLSENLKPTMKFLESFGIDKKQW-PKVIYRFPALLTYSLRREYR 297
P+L S+ + +KFL S G+DK K++ + P ++ YS+ + R
Sbjct: 136 LNPRLISYSIETKMTEIVKFLASVGLDKNGMIGKIMVKDPYIMGYSVDKRLR 187
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 105/221 (47%), Gaps = 21/221 (9%)
Query: 73 FFKKQGLSNAVAARTINKSDLFIDHLVSKLHSKHKSRYLAGRE-LTTLEIRDALIPYLES 131
FFK +G + + + K +L + H+ R + L T+ I++ +P S
Sbjct: 12 FFKHRGFDDTIIQKMFTKC--------KRLETAHRERADENWDYLKTIGIQERKLP---S 60
Query: 132 LLEEHGDVLGDLVESYPNPPVKEKSTLAIPTTSNVVDSKKLKAVSRVDEIDPAA--GKLR 189
++ + +L + P V+ +TLA T + V S A+++ +I + KL
Sbjct: 61 IVSKCPKILVLGLNEKIVPMVECLNTLA--TKPHEVAS----AIAKFPQILSCSVEEKLC 114
Query: 190 PHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKEN-IATILTKR 248
P + + LG+ + + I+ P YS+E K+ +V+F +G+ K I I+ K
Sbjct: 115 PLLAFFQTLGVPEKHIGKILLLNPRLISYSIETKMTEIVKFLASVGLDKNGMIGKIMVKD 174
Query: 249 PQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLT 289
P + G S+ + L+PT +FL+S G+ + + FP++L+
Sbjct: 175 PYIMGYSVDKRLRPTSEFLKSIGLTEHDLQVLALNFPSILS 215
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 194 YLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTKRPQLCG 253
YL +G+ ++ SI+ + P L KI P+VE L +A+ + K PQ+
Sbjct: 47 YLKTIGIQERKLPSIVSKCPKILVLGLNEKIVPMVECLNTLATKPHEVASAIAKFPQILS 106
Query: 254 ISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
S+ E L P + F ++ G+ +K K++ P L++YS+
Sbjct: 107 CSVEEKLCPLLAFFQTLGVPEKHIGKILLLNPRLISYSI 145
>Medtr6g003960.1 | transcription termination factor family protein |
HC | chr6:35948-29152 | 20130731
Length = 609
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 184 AAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIAT 243
+ KL+ + ELG+ +++ +I R P E ++ VV FF +G KENI
Sbjct: 380 STSKLKLMVDQFAELGVQRKKLYQVITRSPQLLLQKPEDFLQ-VVMFFENMGFDKENIGR 438
Query: 244 ILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRR 294
IL + P++ S+S+ L+ ++FL + K P VI ++P LL + +
Sbjct: 439 ILARCPEIFATSISKTLQSKIEFLSRIEVSKAYIPLVIRKYPELLVSDINK 489
>Medtr4g119580.1 | mTERF protein | HC | chr4:49563660-49561008 |
20130731
Length = 377
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%)
Query: 192 IVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTKRPQL 251
I + G I+Q++SIIRR P + I P ++F GV E+I + + P+
Sbjct: 81 IAFFKTHGFSIDQIQSIIRRDPLVFVSNPIKSILPKLQFLASKGVSPEHIIVTVARNPRF 140
Query: 252 CGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLT 289
+SL++++ PT + + SF K+ + FPA ++
Sbjct: 141 LRVSLNKHIIPTFELVRSFCPSDKKAIDCVIAFPATIS 178