Miyakogusa Predicted Gene

Lj0g3v0185899.2
Show Alignment: 
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0185899.2 tr|A9TLG3|A9TLG3_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,48.31,3e-18,seg,NULL; mTERF,Mitochodrial transcription
termination factor-related; SUBFAMILY NOT NAMED,NULL; CGI,CUFF.11831.2
         (297 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g034600.1 | transcription termination factor family protei...   393   e-109
Medtr2g034600.3 | transcription termination factor family protei...   392   e-109
Medtr2g034600.2 | transcription termination factor family protei...   391   e-109
Medtr1g115415.1 | transcription termination factor family protei...    69   5e-12
Medtr8g105560.1 | transcription termination factor family protei...    67   1e-11
Medtr5g094610.1 | transcription termination factor family protei...    66   3e-11
Medtr4g070060.1 | transcription termination factor family protei...    65   1e-10
Medtr5g068860.1 | transcription termination factor family protei...    64   1e-10
Medtr4g084630.1 | transcription termination factor family protei...    62   6e-10
Medtr6g003960.1 | transcription termination factor family protei...    54   2e-07
Medtr4g119580.1 | mTERF protein | HC | chr4:49563660-49561008 | ...    50   2e-06

>Medtr2g034600.1 | transcription termination factor family protein |
           HC | chr2:13233091-13236843 | 20130731
          Length = 557

 Score =  393 bits (1009), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 202/295 (68%), Positives = 228/295 (77%), Gaps = 3/295 (1%)

Query: 2   MKAFSSFQPPQHFPCXXXXXXXXXXXXQLSFHAKAFYCQAKSGIDGSLNLRVMPPTLLXX 61
           MK FSS QPP +F              QL    + F+ Q KS  D SL+++++PPTLL  
Sbjct: 85  MKTFSSIQPPHNFHSTLFFSYTSIRT-QLPSSTRVFFSQEKSDTDESLSVKLLPPTLLAA 143

Query: 62  XXXXXXXVLCLFFKKQGLSNAVAARTINKSDLFIDHLVSKLHSKHKSRYLAGRELTTLEI 121
                  VL LF KK+GLSNA AARTINKSD FIDHL+SKLHSKHK+ YL+GRELTTLEI
Sbjct: 144 EKEEAKAVLTLFLKKRGLSNANAARTINKSDPFIDHLLSKLHSKHKTWYLSGRELTTLEI 203

Query: 122 RDALIPYLESLLEEHGDVLGDLVESYPNPPVKEKS--TLAIPTTSNVVDSKKLKAVSRVD 179
           RDALI YLESL EEHG++L D VE+YPNPPVK+KS   +  P  S  VDSKK+KAVSRV 
Sbjct: 204 RDALISYLESLYEEHGEILVDAVENYPNPPVKDKSDAPIPPPNPSPAVDSKKVKAVSRVS 263

Query: 180 EIDPAAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKE 239
            IDPA G LRPHI YLMELGM+ +QVRSI+RRFPAFAYYSLEGKIKPVVEFFLELGVPKE
Sbjct: 264 GIDPAEGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKE 323

Query: 240 NIATILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRR 294
            I  ILTKRPQLCGISLS+NLKPTMKF ES G+DK+QW KVIYRFPALLTYS ++
Sbjct: 324 KIIIILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQK 378



 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)

Query: 187 KLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILT 246
            L+P + +   LG+D EQ   +I RFPA   YS + KI   ++F  E GV +ENI  ILT
Sbjct: 343 NLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQ-KINESLDFLREFGVSEENIGKILT 401

Query: 247 KRPQLCGISLSENLKPTMKFLESFGID 273
           + P +   S+ +NL+PT  +  S G+D
Sbjct: 402 RCPTIVSYSVEDNLRPTAMYFRSLGVD 428



 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 3/109 (2%)

Query: 184 AAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIAT 243
           +  K+   + +L E G+  E +  I+ R P    YS+E  ++P   +F  LGV   ++  
Sbjct: 375 STQKINESLDFLREFGVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGV---DVGL 431

Query: 244 ILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
           +L   PQ  G+S+  N+KP  +F    G   ++   +I R+  L T+SL
Sbjct: 432 LLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIKRYGMLYTFSL 480



 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 7/111 (6%)

Query: 187 KLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILT 246
            LRP  +Y   LG+D   V  ++   P     S+E  IKPV +FFLE G   E I  ++ 
Sbjct: 414 NLRPTAMYFRSLGVD---VGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIK 470

Query: 247 KRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRREYR 297
           +   L   SL+ENL P   +  +    K +    + +FP    YSL +  +
Sbjct: 471 RYGMLYTFSLTENLMPKWDYFLTMDYPKSE----LVKFPQFFGYSLEQRIK 517


>Medtr2g034600.3 | transcription termination factor family protein |
           HC | chr2:13233799-13236843 | 20130731
          Length = 496

 Score =  392 bits (1006), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 202/298 (67%), Positives = 228/298 (76%), Gaps = 5/298 (1%)

Query: 2   MKAFSSFQPPQHFPCXXXXXXXXX---XXXQLSFHAKAFYCQAKSGIDGSLNLRVMPPTL 58
           MK FSS QPP +F                 QL    + F+ Q KS  D SL+++++PPTL
Sbjct: 20  MKTFSSIQPPHNFHSTLFFSYTSIRFCIRTQLPSSTRVFFSQEKSDTDESLSVKLLPPTL 79

Query: 59  LXXXXXXXXXVLCLFFKKQGLSNAVAARTINKSDLFIDHLVSKLHSKHKSRYLAGRELTT 118
           L         VL LF KK+GLSNA AARTINKSD FIDHL+SKLHSKHK+ YL+GRELTT
Sbjct: 80  LAAEKEEAKAVLTLFLKKRGLSNANAARTINKSDPFIDHLLSKLHSKHKTWYLSGRELTT 139

Query: 119 LEIRDALIPYLESLLEEHGDVLGDLVESYPNPPVKEKS--TLAIPTTSNVVDSKKLKAVS 176
           LEIRDALI YLESL EEHG++L D VE+YPNPPVK+KS   +  P  S  VDSKK+KAVS
Sbjct: 140 LEIRDALISYLESLYEEHGEILVDAVENYPNPPVKDKSDAPIPPPNPSPAVDSKKVKAVS 199

Query: 177 RVDEIDPAAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGV 236
           RV  IDPA G LRPHI YLMELGM+ +QVRSI+RRFPAFAYYSLEGKIKPVVEFFLELGV
Sbjct: 200 RVSGIDPAEGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGV 259

Query: 237 PKENIATILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRR 294
           PKE I  ILTKRPQLCGISLS+NLKPTMKF ES G+DK+QW KVIYRFPALLTYS ++
Sbjct: 260 PKEKIIIILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQK 317



 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)

Query: 185 AGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATI 244
           +  L+P + +   LG+D EQ   +I RFPA   YS + KI   ++F  E GV +ENI  I
Sbjct: 280 SKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQ-KINESLDFLREFGVSEENIGKI 338

Query: 245 LTKRPQLCGISLSENLKPTMKFLESFGID 273
           LT+ P +   S+ +NL+PT  +  S G+D
Sbjct: 339 LTRCPTIVSYSVEDNLRPTAMYFRSLGVD 367



 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 3/109 (2%)

Query: 184 AAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIAT 243
           +  K+   + +L E G+  E +  I+ R P    YS+E  ++P   +F  LGV   ++  
Sbjct: 314 STQKINESLDFLREFGVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGV---DVGL 370

Query: 244 ILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
           +L   PQ  G+S+  N+KP  +F    G   ++   +I R+  L T+SL
Sbjct: 371 LLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIKRYGMLYTFSL 419



 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 7/110 (6%)

Query: 188 LRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTK 247
           LRP  +Y   LG+D   V  ++   P     S+E  IKPV +FFLE G   E I  ++ +
Sbjct: 354 LRPTAMYFRSLGVD---VGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIKR 410

Query: 248 RPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRREYR 297
              L   SL+ENL P   +  +    K +    + +FP    YSL +  +
Sbjct: 411 YGMLYTFSLTENLMPKWDYFLTMDYPKSE----LVKFPQFFGYSLEQRIK 456


>Medtr2g034600.2 | transcription termination factor family protein |
           HC | chr2:13233091-13236856 | 20130731
          Length = 561

 Score =  391 bits (1005), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 202/298 (67%), Positives = 228/298 (76%), Gaps = 5/298 (1%)

Query: 2   MKAFSSFQPPQHFPCXXXXXXXXX---XXXQLSFHAKAFYCQAKSGIDGSLNLRVMPPTL 58
           MK FSS QPP +F                 QL    + F+ Q KS  D SL+++++PPTL
Sbjct: 85  MKTFSSIQPPHNFHSTLFFSYTSIRFCIRTQLPSSTRVFFSQEKSDTDESLSVKLLPPTL 144

Query: 59  LXXXXXXXXXVLCLFFKKQGLSNAVAARTINKSDLFIDHLVSKLHSKHKSRYLAGRELTT 118
           L         VL LF KK+GLSNA AARTINKSD FIDHL+SKLHSKHK+ YL+GRELTT
Sbjct: 145 LAAEKEEAKAVLTLFLKKRGLSNANAARTINKSDPFIDHLLSKLHSKHKTWYLSGRELTT 204

Query: 119 LEIRDALIPYLESLLEEHGDVLGDLVESYPNPPVKEKS--TLAIPTTSNVVDSKKLKAVS 176
           LEIRDALI YLESL EEHG++L D VE+YPNPPVK+KS   +  P  S  VDSKK+KAVS
Sbjct: 205 LEIRDALISYLESLYEEHGEILVDAVENYPNPPVKDKSDAPIPPPNPSPAVDSKKVKAVS 264

Query: 177 RVDEIDPAAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGV 236
           RV  IDPA G LRPHI YLMELGM+ +QVRSI+RRFPAFAYYSLEGKIKPVVEFFLELGV
Sbjct: 265 RVSGIDPAEGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGV 324

Query: 237 PKENIATILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRR 294
           PKE I  ILTKRPQLCGISLS+NLKPTMKF ES G+DK+QW KVIYRFPALLTYS ++
Sbjct: 325 PKEKIIIILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQK 382



 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)

Query: 187 KLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILT 246
            L+P + +   LG+D EQ   +I RFPA   YS + KI   ++F  E GV +ENI  ILT
Sbjct: 347 NLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQ-KINESLDFLREFGVSEENIGKILT 405

Query: 247 KRPQLCGISLSENLKPTMKFLESFGID 273
           + P +   S+ +NL+PT  +  S G+D
Sbjct: 406 RCPTIVSYSVEDNLRPTAMYFRSLGVD 432



 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 3/109 (2%)

Query: 184 AAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIAT 243
           +  K+   + +L E G+  E +  I+ R P    YS+E  ++P   +F  LGV   ++  
Sbjct: 379 STQKINESLDFLREFGVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGV---DVGL 435

Query: 244 ILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
           +L   PQ  G+S+  N+KP  +F    G   ++   +I R+  L T+SL
Sbjct: 436 LLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIKRYGMLYTFSL 484



 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 7/111 (6%)

Query: 187 KLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILT 246
            LRP  +Y   LG+D   V  ++   P     S+E  IKPV +FFLE G   E I  ++ 
Sbjct: 418 NLRPTAMYFRSLGVD---VGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIK 474

Query: 247 KRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRREYR 297
           +   L   SL+ENL P   +  +    K +    + +FP    YSL +  +
Sbjct: 475 RYGMLYTFSLTENLMPKWDYFLTMDYPKSE----LVKFPQFFGYSLEQRIK 521


>Medtr1g115415.1 | transcription termination factor family protein |
           HC | chr1:52109146-52107512 | 20130731
          Length = 501

 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 62/108 (57%)

Query: 186 GKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATIL 245
           G +   + YL+ +G++   +  ++ ++P F    +   IKP+V++ + LG+PK  +A +L
Sbjct: 209 GTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTMIKPLVDYLVNLGLPKRILARML 268

Query: 246 TKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLR 293
            KR  L G  L E +KP +  L SFG+ K+  P VI ++P ++   L+
Sbjct: 269 EKRAYLLGYDLEETVKPNVDCLISFGLRKEYLPSVIAQYPLIIGLPLK 316



 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 54/99 (54%)

Query: 190 PHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTKRP 249
           P + YL ++G+   ++   I+ +P   + S+  ++ PV++F   L V K++I  +L K P
Sbjct: 141 PVLGYLEKIGISRSKLGEFIKNYPQVLHASVIVELAPVIKFLRGLDVEKDDIGFVLQKYP 200

Query: 250 QLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALL 288
           +L G  L   +  ++ +L S G++ +    ++ ++P  L
Sbjct: 201 ELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFL 239


>Medtr8g105560.1 | transcription termination factor family protein |
           HC | chr8:44520352-44517998 | 20130731
          Length = 560

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 60/103 (58%)

Query: 186 GKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATIL 245
           G +   + YL+ +G++   +  ++ ++P F    +   IKP V++ + LG+PK+ +A +L
Sbjct: 156 GTMSTSVAYLVSIGVNPRDIGPMVAQYPYFLGMRVGTMIKPFVDYLVNLGLPKKILARML 215

Query: 246 TKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALL 288
            KR  L G  L E +KP +  L SFG+ K+  P VI ++P ++
Sbjct: 216 EKRAYLLGYVLEETMKPNVDCLISFGLRKECLPSVIAQYPQII 258


>Medtr5g094610.1 | transcription termination factor family protein |
           HC | chr5:41344877-41348219 | 20130731
          Length = 503

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 1/98 (1%)

Query: 192 IVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTKRPQL 251
           I YLM LG+  + +R I+ R P    Y++E  +K  V F + LGVP   I  I+   P L
Sbjct: 230 IDYLMSLGVKHKDIRRILLRQPQILEYTVENNLKTHVAFLMGLGVPSTKIGQIIASTPSL 289

Query: 252 CGISLSENLKPTMKFL-ESFGIDKKQWPKVIYRFPALL 288
              S+ ++LKPT+++L E  GI +K   KVI   P +L
Sbjct: 290 FSYSVEKSLKPTVRYLIEEVGIKEKDLGKVIQLSPQIL 327



 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 38/145 (26%)

Query: 186 GKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFL------------- 232
             L+ H+ +LM LG+   ++  II   P+   YS+E  +KP V + +             
Sbjct: 260 NNLKTHVAFLMGLGVPSTKIGQIIASTPSLFSYSVEKSLKPTVRYLIEEVGIKEKDLGKV 319

Query: 233 -------------------------ELGVPKENIATILTKRPQLCGISLSENLKPTMKFL 267
                                    EL  PKE+I  ++TK PQL   S+ + L P + FL
Sbjct: 320 IQLSPQILVQRIDISWNTRLMFLNKELDAPKESIVKMVTKHPQLLHYSIDDGLLPRINFL 379

Query: 268 ESFGIDKKQWPKVIYRFPALLTYSL 292
            S G+      K++     +L+ SL
Sbjct: 380 RSIGMKNADILKILTSLTQVLSLSL 404


>Medtr4g070060.1 | transcription termination factor family protein |
           HC | chr4:26370303-26365871 | 20130731
          Length = 617

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 1/104 (0%)

Query: 190 PHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFL-ELGVPKENIATILTKR 248
           P + +  +LG+  + +  ++ +FP    YSL  KI+PVV F + + GV +ENI  ++   
Sbjct: 419 PKVKFFQDLGVRNDGIAKMLVKFPTLLTYSLYKKIRPVVIFLMTKAGVTEENIPKVIALG 478

Query: 249 PQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
           P+L G S+   L+  +K+  S GI  +Q  ++I  FP LL Y++
Sbjct: 479 PELLGCSIVHKLEGNVKYYLSLGIRLQQLGEMIADFPMLLRYNI 522



 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 57/104 (54%)

Query: 194 YLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTKRPQLCG 253
           YL E G++ + V  ++   P     S+E + KP+V++    G+ ++ +  +LT +P +  
Sbjct: 351 YLKEFGLESKDVGKLLAFRPQLMACSIEEQWKPLVKYLYYYGITRDGMRRMLTIKPMVFC 410

Query: 254 ISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRREYR 297
           + L   + P +KF +  G+      K++ +FP LLTYSL ++ R
Sbjct: 411 VDLEMTIVPKVKFFQDLGVRNDGIAKMLVKFPTLLTYSLYKKIR 454



 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 187 KLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILT 246
           + +P + YL   G+  + +R ++   P      LE  I P V+FF +LGV  + IA +L 
Sbjct: 380 QWKPLVKYLYYYGITRDGMRRMLTIKPMVFCVDLEMTIVPKVKFFQDLGVRNDGIAKMLV 439

Query: 247 KRPQLCGISLSENLKPTMKFLES-FGIDKKQWPKVIYRFPALLTYSL 292
           K P L   SL + ++P + FL +  G+ ++  PKVI   P LL  S+
Sbjct: 440 KFPTLLTYSLYKKIRPVVIFLMTKAGVTEENIPKVIALGPELLGCSI 486



 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 1/114 (0%)

Query: 184 AAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIAT 243
           + G+L   + YL   G+  E +  ++ R P    YSLE ++K  V+F+L++G+  ++  T
Sbjct: 270 SDGELDEIVDYLEFNGVRREWMGYVVSRCPKLLSYSLE-EVKTRVQFYLDMGLDAKDFGT 328

Query: 244 ILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRREYR 297
           ++   P+  G    E +   + +L+ FG++ K   K++   P L+  S+  +++
Sbjct: 329 MVFDFPKALGHYTLEEMNRKVDYLKEFGLESKDVGKLLAFRPQLMACSIEEQWK 382


>Medtr5g068860.1 | transcription termination factor family protein |
           HC | chr5:29165945-29163659 | 20130731
          Length = 530

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 56/107 (52%)

Query: 186 GKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATIL 245
           G +   + YL+ +G+   ++  I+ RFP      +   IKP VE+   LG+P+  IA ++
Sbjct: 241 GTMSTSVAYLIGIGVGRRELGGILTRFPEILGMRVGRVIKPFVEYLESLGIPRLAIARLI 300

Query: 246 TKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
             +P + G  L E +KP +K LE F + +     +I ++P ++   L
Sbjct: 301 ETQPYILGFDLDEKVKPNVKSLEEFNVRETSLASIIAQYPDIIGTDL 347



 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 2/96 (2%)

Query: 199 GMDI--EQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTKRPQLCGISL 256
           GMDI  + +  ++ R+P    + LEG +   V + + +GV +  +  ILT+ P++ G+ +
Sbjct: 216 GMDIKPDDIPRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRRELGGILTRFPEILGMRV 275

Query: 257 SENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
              +KP +++LES GI +    ++I   P +L + L
Sbjct: 276 GRVIKPFVEYLESLGIPRLAIARLIETQPYILGFDL 311


>Medtr4g084630.1 | transcription termination factor family protein |
           HC | chr4:32962573-32960937 | 20130731
          Length = 332

 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 1/112 (0%)

Query: 187 KLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILT 246
           K+ P +  L  L     +V S I +FP     S+E K+ P++ FF  LGVP+++I  IL 
Sbjct: 76  KIVPMVECLNTLATKPHEVASAIAKFPQILSCSVEEKLCPLLAFFQTLGVPEKHIGKILL 135

Query: 247 KRPQLCGISLSENLKPTMKFLESFGIDKKQW-PKVIYRFPALLTYSLRREYR 297
             P+L   S+   +   +KFL S G+DK     K++ + P ++ YS+ +  R
Sbjct: 136 LNPRLISYSIETKMTEIVKFLASVGLDKNGMIGKIMVKDPYIMGYSVDKRLR 187



 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 105/221 (47%), Gaps = 21/221 (9%)

Query: 73  FFKKQGLSNAVAARTINKSDLFIDHLVSKLHSKHKSRYLAGRE-LTTLEIRDALIPYLES 131
           FFK +G  + +  +   K          +L + H+ R     + L T+ I++  +P   S
Sbjct: 12  FFKHRGFDDTIIQKMFTKC--------KRLETAHRERADENWDYLKTIGIQERKLP---S 60

Query: 132 LLEEHGDVLGDLVESYPNPPVKEKSTLAIPTTSNVVDSKKLKAVSRVDEIDPAA--GKLR 189
           ++ +   +L   +     P V+  +TLA  T  + V S    A+++  +I   +   KL 
Sbjct: 61  IVSKCPKILVLGLNEKIVPMVECLNTLA--TKPHEVAS----AIAKFPQILSCSVEEKLC 114

Query: 190 PHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKEN-IATILTKR 248
           P + +   LG+  + +  I+   P    YS+E K+  +V+F   +G+ K   I  I+ K 
Sbjct: 115 PLLAFFQTLGVPEKHIGKILLLNPRLISYSIETKMTEIVKFLASVGLDKNGMIGKIMVKD 174

Query: 249 PQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLT 289
           P + G S+ + L+PT +FL+S G+ +     +   FP++L+
Sbjct: 175 PYIMGYSVDKRLRPTSEFLKSIGLTEHDLQVLALNFPSILS 215



 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%)

Query: 194 YLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTKRPQLCG 253
           YL  +G+   ++ SI+ + P      L  KI P+VE    L      +A+ + K PQ+  
Sbjct: 47  YLKTIGIQERKLPSIVSKCPKILVLGLNEKIVPMVECLNTLATKPHEVASAIAKFPQILS 106

Query: 254 ISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSL 292
            S+ E L P + F ++ G+ +K   K++   P L++YS+
Sbjct: 107 CSVEEKLCPLLAFFQTLGVPEKHIGKILLLNPRLISYSI 145


>Medtr6g003960.1 | transcription termination factor family protein |
           HC | chr6:35948-29152 | 20130731
          Length = 609

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 1/111 (0%)

Query: 184 AAGKLRPHIVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIAT 243
           +  KL+  +    ELG+  +++  +I R P       E  ++ VV FF  +G  KENI  
Sbjct: 380 STSKLKLMVDQFAELGVQRKKLYQVITRSPQLLLQKPEDFLQ-VVMFFENMGFDKENIGR 438

Query: 244 ILTKRPQLCGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLTYSLRR 294
           IL + P++   S+S+ L+  ++FL    + K   P VI ++P LL   + +
Sbjct: 439 ILARCPEIFATSISKTLQSKIEFLSRIEVSKAYIPLVIRKYPELLVSDINK 489


>Medtr4g119580.1 | mTERF protein | HC | chr4:49563660-49561008 |
           20130731
          Length = 377

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 50/98 (51%)

Query: 192 IVYLMELGMDIEQVRSIIRRFPAFAYYSLEGKIKPVVEFFLELGVPKENIATILTKRPQL 251
           I +    G  I+Q++SIIRR P     +    I P ++F    GV  E+I   + + P+ 
Sbjct: 81  IAFFKTHGFSIDQIQSIIRRDPLVFVSNPIKSILPKLQFLASKGVSPEHIIVTVARNPRF 140

Query: 252 CGISLSENLKPTMKFLESFGIDKKQWPKVIYRFPALLT 289
             +SL++++ PT + + SF    K+    +  FPA ++
Sbjct: 141 LRVSLNKHIIPTFELVRSFCPSDKKAIDCVIAFPATIS 178