Miyakogusa Predicted Gene

Lj0g3v0182029.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0182029.1 Non Characterized Hit- tr|H3GQI8|H3GQI8_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,29.31,1e-18,DUF2348,Uncharacterised protein family UPF0405;
Hap2_elong,Histone acetylation protein 2; no descrip,CUFF.11584.1
         (254 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g451710.1 | paxneb protein | HC | chr7:17603010-17596561 |...   288   5e-78
Medtr7g047440.1 | elongator complex-like protein | HC | chr7:166...   287   8e-78
Medtr7g451610.1 | elongator complex-like protein | HC | chr7:174...   285   2e-77
Medtr7g050450.1 | DUF2348 family protein | HC | chr7:16828123-16...    89   4e-18

>Medtr7g451710.1 | paxneb protein | HC | chr7:17603010-17596561 |
           20130731
          Length = 317

 Score =  288 bits (736), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 138/156 (88%), Positives = 148/156 (94%), Gaps = 2/156 (1%)

Query: 99  DEGKLNHDGFAAVFEKIERVVKALHQDNMKFASIMIDDISFLEVAANGSSNDVLDFLHYC 158
           +EGK NH+GFAAVFEKIE V+KAL QDNMKFA+IMIDDISFL+VAANGSSNDVLDFLHYC
Sbjct: 164 NEGKPNHNGFAAVFEKIESVIKALPQDNMKFATIMIDDISFLQVAANGSSNDVLDFLHYC 223

Query: 159 HTLTSEYGCAFIALDHKDIYLNEESPAIILEMEYLADVLVKAEPLATGLAKDVHGQLMVL 218
           +TLTSEYGCAFIALDHKDIYLNEE PAIILEMEYLAD+LVKAEPLATGLAKDVHGQLMVL
Sbjct: 224 YTLTSEYGCAFIALDHKDIYLNEEKPAIILEMEYLADILVKAEPLATGLAKDVHGQLMVL 283

Query: 219 HKETQHQHGSSPFKIHNFHFKIKENSIECFYPGTKI 254
           HK+T  QHG +P KIHNFH+KIKENSIECFYPGTKI
Sbjct: 284 HKQT--QHGIAPVKIHNFHYKIKENSIECFYPGTKI 317


>Medtr7g047440.1 | elongator complex-like protein | HC |
           chr7:16642667-16638805 | 20130731
          Length = 320

 Score =  287 bits (734), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 138/156 (88%), Positives = 148/156 (94%), Gaps = 2/156 (1%)

Query: 99  DEGKLNHDGFAAVFEKIERVVKALHQDNMKFASIMIDDISFLEVAANGSSNDVLDFLHYC 158
           +EGK NH+GFAAVFEKIE V+KAL QDNMKFA+IMIDDISFL+VAANGSSNDVLDFLHYC
Sbjct: 167 NEGKPNHNGFAAVFEKIESVIKALPQDNMKFATIMIDDISFLQVAANGSSNDVLDFLHYC 226

Query: 159 HTLTSEYGCAFIALDHKDIYLNEESPAIILEMEYLADVLVKAEPLATGLAKDVHGQLMVL 218
           +TLTSEYGCAFIALDHKDIYLNEE PAIILEMEYLAD+LVKAEPLATGLAKDVHGQLMVL
Sbjct: 227 YTLTSEYGCAFIALDHKDIYLNEEKPAIILEMEYLADILVKAEPLATGLAKDVHGQLMVL 286

Query: 219 HKETQHQHGSSPFKIHNFHFKIKENSIECFYPGTKI 254
           HK+T  QHG +P KIHNFH+KIKENSIECFYPGTKI
Sbjct: 287 HKQT--QHGIAPVKIHNFHYKIKENSIECFYPGTKI 320


>Medtr7g451610.1 | elongator complex-like protein | HC |
           chr7:17454123-17456653 | 20130731
          Length = 180

 Score =  285 bits (730), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 138/156 (88%), Positives = 148/156 (94%), Gaps = 2/156 (1%)

Query: 99  DEGKLNHDGFAAVFEKIERVVKALHQDNMKFASIMIDDISFLEVAANGSSNDVLDFLHYC 158
           +EGK NH+GFAAVFEKIE V+KAL QDNMKFA+IMIDDISFL+VAANGSSNDVLDFLHYC
Sbjct: 27  NEGKPNHNGFAAVFEKIESVIKALPQDNMKFATIMIDDISFLQVAANGSSNDVLDFLHYC 86

Query: 159 HTLTSEYGCAFIALDHKDIYLNEESPAIILEMEYLADVLVKAEPLATGLAKDVHGQLMVL 218
           +TLTSEYGCAFIALDHKDIYLNEE PAIILEMEYLAD+LVKAEPLATGLAKDVHGQLMVL
Sbjct: 87  YTLTSEYGCAFIALDHKDIYLNEEKPAIILEMEYLADILVKAEPLATGLAKDVHGQLMVL 146

Query: 219 HKETQHQHGSSPFKIHNFHFKIKENSIECFYPGTKI 254
           HK+T  QHG +P KIHNFH+KIKENSIECFYPGTKI
Sbjct: 147 HKQT--QHGIAPVKIHNFHYKIKENSIECFYPGTKI 180


>Medtr7g050450.1 | DUF2348 family protein | HC |
          chr7:16828123-16826129 | 20130731
          Length = 191

 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/82 (65%), Positives = 66/82 (80%), Gaps = 4/82 (4%)

Query: 1  MEQHRDSNLLDEALGLHNNNNSLCGRFVLVEDCVDTSAAFVLHHIIKR---SLSSHPVVF 57
          MEQ ++ NLL+E+LG +NNNN+L G+FVLVED VDTSAAFVLHHI KR   S  S  V+F
Sbjct: 1  MEQ-KELNLLNESLGFNNNNNNLYGQFVLVEDTVDTSAAFVLHHIFKRSFSSHPSSSVIF 59

Query: 58 LAFSHPFSHYDRILRKLGCNLA 79
          LA SHPFSHYDR+LRK+  +L+
Sbjct: 60 LALSHPFSHYDRVLRKIVISLS 81



 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/26 (84%), Positives = 23/26 (88%)

Query: 75  GCNLAAQRDNNRFFFIDMLMLQCPDE 100
           GCNLAAQRDNN+FFFIDMLMLQ   E
Sbjct: 142 GCNLAAQRDNNKFFFIDMLMLQFQGE 167