Miyakogusa Predicted Gene

Lj0g3v0172019.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0172019.1 Non Characterized Hit- tr|A5BL14|A5BL14_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.5,3e-19,seg,NULL,CUFF.10801.1
         (185 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g107210.1 | stenofolia-like protein | HC | chr8:45305362-4...   121   3e-28

>Medtr8g107210.1 | stenofolia-like protein | HC |
           chr8:45305362-45303362 | 20130731
          Length = 358

 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/200 (43%), Positives = 101/200 (50%), Gaps = 42/200 (21%)

Query: 3   EVEQTKNWAPSTNCSTH----AEESVPTQRAAKAVVAAECRLGGWLQFDEEESQQRRNFL 58
           EVE TKNW PSTN ST     AEESV  QR+A A  A      GWLQFDE E QQRRNF+
Sbjct: 184 EVEHTKNWLPSTNSSTSTLHLAEESVSIQRSAAAAKA-----DGWLQFDEAELQQRRNFM 238

Query: 59  ERNDTWHMMHQLTCXXXXXXXXXLIKXXXXXXXXXXXXXXXXXXXXXVRNYLIKTHDLTF 118
           ERN TWHMM QLT                                      LIKTH+L  
Sbjct: 239 ERNATWHMM-QLTSSCPTASMSTTTTVTTRLMDPK----------------LIKTHELNL 281

Query: 119 FISPQS-EEHDNCVVE-----------SQTLQLFPLRSTXXXXXXXXXXIN-DKETEISA 165
           FISP + +E +N  +             QTLQLFP+R+            N  KET+ISA
Sbjct: 282 FISPHTYKERENAFIHLNTSSTHQNESDQTLQLFPIRNGDHGCTDHHHHHNIIKETQISA 341

Query: 166 SALNSNLTPSQYFEFLPLKN 185
           SA+N+   P+Q+ EFLPLKN
Sbjct: 342 SAINA---PNQFIEFLPLKN 358