Miyakogusa Predicted Gene

Lj0g3v0163069.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0163069.1 Non Characterized Hit- tr|B6TZL4|B6TZL4_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,33.88,4e-18,seg,NULL,CUFF.10160.1
         (226 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g063720.1 | hypothetical protein | HC | chr5:26415849-2641...   227   5e-60
Medtr3g074450.1 | hypothetical protein | HC | chr3:33641743-3364...   177   9e-45

>Medtr5g063720.1 | hypothetical protein | HC |
           chr5:26415849-26416831 | 20130731
          Length = 213

 Score =  227 bits (579), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 134/230 (58%), Positives = 160/230 (69%), Gaps = 23/230 (10%)

Query: 1   MVSLHKALTESPKTQASIAEFQALPKKRSWEDT--LTKEFFKDHT-DAEKSKPIFDIELH 57
           MVSLHKAL  SPK ++S  +F    KKR WE++    +EFFKD T D  K K IFDIELH
Sbjct: 1   MVSLHKALAMSPKKESS-TDFDGPQKKRKWEESPLSDQEFFKDLTHDLGKRKSIFDIELH 59

Query: 58  LKTPLPSDKWQQYLSIQSGQIHFCNTRMDMKTPDSQSQCGPQFKTLPEYEEASLGQMSLD 117
           LKTPLPSDKWQQYL++QSGQI  CNT+M+MKT +S+ +        P  E++SLG +SLD
Sbjct: 60  LKTPLPSDKWQQYLTVQSGQIQLCNTKMNMKTQESKRE-------YPLPEKSSLGHLSLD 112

Query: 118 LELNLTCESVKKIRXXXXXXXXXXXXNSGSLLIES-SNNKKDSCVLTQTPSWLSSEGDDH 176
           LELNLTCE++KK                 +L+ ES S NKKDS     +    SS GDD+
Sbjct: 113 LELNLTCETLKK-------KEESYYEKKNNLVNESISKNKKDSSSWLSS---SSSNGDDY 162

Query: 177 NEMIAAVCMRCHLLVMLCKSSPSCPNCKFMH-PPDQSPSQFLKRRRFSLL 225
            EMIA VCM+CH+LVMLCKSSPSCPNCKFMH PPDQ+PS+FLKR RFS L
Sbjct: 163 KEMIATVCMKCHMLVMLCKSSPSCPNCKFMHPPPDQNPSKFLKRTRFSFL 212


>Medtr3g074450.1 | hypothetical protein | HC |
           chr3:33641743-33642559 | 20130731
          Length = 220

 Score =  177 bits (448), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 114/229 (49%), Positives = 141/229 (61%), Gaps = 25/229 (10%)

Query: 1   MVSLHKALTESPKTQASIAEFQALPKKRSWEDTLTKEFFKDHTDAEKSKPIFDIELHLKT 60
           MVSL KAL+ +P+T+    EF++  +KR +E+  T+EFFKD T+ EK K  FD +  L+T
Sbjct: 1   MVSLFKALSMTPRTEVK-EEFES-SRKRKFEEPFTEEFFKDQTNLEKRKSTFDTKPPLET 58

Query: 61  PLPSDKWQQYLSIQSGQIHFCNTRMDMKTPDSQSQCGPQFKTLPEYEEASLGQ-----MS 115
             PS+ W QYL IQSGQI  CNTR D              +T  E  + SL Q     MS
Sbjct: 59  MFPSNNWCQYLGIQSGQIQLCNTRPD--------------RTTIETSKRSLRQPLSDHMS 104

Query: 116 LDLELNLTCESVKKIRXXXXXXXXXXXXNSGS----LLIESSNNKKDSCVLTQTPSWLSS 171
           LDLELNLTCES +K               S S    L IESS  KKDS  L  + SWLS+
Sbjct: 105 LDLELNLTCESQRKKENSDQKKNSGNSPKSLSEHDDLCIESSKFKKDSGGLNGSQSWLST 164

Query: 172 EGDDHNEMIAAVCMRCHLLVMLCKSSPSCPNCKFMHPPDQSPSQFLKRR 220
              D+ EM+A VCM+CH+LVM+CKSSP+CPNCKFMH PDQ+PS+FLK R
Sbjct: 165 TEGDYKEMVATVCMQCHMLVMICKSSPACPNCKFMHSPDQNPSKFLKSR 213