Miyakogusa Predicted Gene

Lj0g3v0146999.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0146999.1 CUFF.8981.1
         (91 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g069770.1 | DUF2775 family protein | HC | chr4:26235941-26...   116   4e-27
Medtr5g095980.1 | DUF2775 family protein | LC | chr5:41966113-41...    86   8e-18
Medtr3g007880.1 | transmembrane protein, putative | HC | chr3:12...    80   3e-16
Medtr3g116395.1 | transmembrane protein, putative | HC | chr3:54...    47   5e-06

>Medtr4g069770.1 | DUF2775 family protein | HC |
          chr4:26235941-26235532 | 20130731
          Length = 94

 Score =  116 bits (291), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 5/91 (5%)

Query: 1  MKSSFAVFAVFSILLIANCSCATRDLGDYWKNMMKGQAMPEAIKELVQDPQASYAGKDRF 60
          MKS FA F +FS+LL+A+ S A +DLG YWKNMM  Q MPEAIKELVQ+ + S    D F
Sbjct: 1  MKSIFASFILFSLLLVADLSYARKDLGGYWKNMMNDQPMPEAIKELVQNQEVS----DDF 56

Query: 61 IRDFDIRPNVILYHTHVGSSTKQKQNTFAKN 91
          IRDFD++PNVILYHTHV  S K+K++ F KN
Sbjct: 57 IRDFDVKPNVILYHTHV-ESKKKKEHVFVKN 86


>Medtr5g095980.1 | DUF2775 family protein | LC |
          chr5:41966113-41966776 | 20130731
          Length = 101

 Score = 85.9 bits (211), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/92 (56%), Positives = 62/92 (67%), Gaps = 2/92 (2%)

Query: 1  MKSSFAVFAVFSILLIANCSCATRDLGDYWKNMMKGQAMPEAIKELVQDPQASYAGKD-- 58
          MKS  A+F VFS+LL+AN S A +DLGDYWKN M  Q MPEAIK L+Q P+A   GK+  
Sbjct: 1  MKSIQALFLVFSLLLVANLSYARKDLGDYWKNKMNEQPMPEAIKNLIQVPKALDEGKEDH 60

Query: 59 RFIRDFDIRPNVILYHTHVGSSTKQKQNTFAK 90
           F  DFD+ PN+ILYHTHV    K  Q+   K
Sbjct: 61 SFTTDFDVNPNIILYHTHVHQDEKPFQHAARK 92


>Medtr3g007880.1 | transmembrane protein, putative | HC |
          chr3:1227463-1228319 | 20130731
          Length = 101

 Score = 80.5 bits (197), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 2/84 (2%)

Query: 1  MKSSFAVFAVFSILLIANCSCATRDLGDYWKNMMKGQAMPEAIKELVQDPQASYAGKD-- 58
          MKS  A+F VFS+LL+AN S A +DLGD WKN M  Q MPEAIK  +Q P+A   GK+  
Sbjct: 1  MKSIQALFLVFSLLLVANMSYARKDLGDLWKNKMNKQPMPEAIKNFIQVPKALGEGKEDH 60

Query: 59 RFIRDFDIRPNVILYHTHVGSSTK 82
           F  DFD+ PN+ILYHTHV    K
Sbjct: 61 SFTTDFDVNPNIILYHTHVHQDEK 84


>Medtr3g116395.1 | transmembrane protein, putative | HC |
          chr3:54435652-54435229 | 20130731
          Length = 62

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 26/31 (83%), Gaps = 1/31 (3%)

Query: 17 ANCSCATRD-LGDYWKNMMKGQAMPEAIKEL 46
           N SCAT++ + +YWKNMMKG+AMPEAIK L
Sbjct: 17 TNLSCATKENMVEYWKNMMKGEAMPEAIKGL 47