Miyakogusa Predicted Gene

Lj0g3v0146209.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0146209.1 tr|H6S0L9|H6S0L9_LOTJA CCD7-like protein OS=Lotus
japonicus GN=CCD7 PE=2 SV=1,99.49,0,seg,NULL; SUBFAMILY NOT
NAMED,NULL; BETA-CAROTENE DIOXYGENASE,Carotenoid oxygenase;
RPE65,Carotenoid,CUFF.8912.1
         (599 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g045370.1 | carotenoid cleavage dioxygenase | HC | chr7:15...   907   0.0  

>Medtr7g045370.1 | carotenoid cleavage dioxygenase | HC |
           chr7:15960760-15955054 | 20130731
          Length = 621

 Score =  907 bits (2345), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/527 (79%), Positives = 476/527 (90%), Gaps = 2/527 (0%)

Query: 73  ELDDSIVAPWDYQFLFMSQRSETTQPITLRVVDGAVPADFPTGTYYLTGPGILSDDHGST 132
           E DD +VA WDY FLFMSQRSETTQPI L V++GA+P DFP+G YYLTGPGI  DDHGST
Sbjct: 62  EHDDPVVASWDYNFLFMSQRSETTQPIKLHVLEGAIPTDFPSGAYYLTGPGIFKDDHGST 121

Query: 133 VHPLDGHGYLRAFTFDNNVTNKVKYMAKYIRTEAQLEEHDPKTNTWKFTHRGPFSVLKGG 192
           VHPLDGHGYLRAFTFDN  TN+VKYMAKYI+TEAQ+EE+D KT +W+FTHRGPFSVLKGG
Sbjct: 122 VHPLDGHGYLRAFTFDN-ATNEVKYMAKYIKTEAQVEEYDRKTGSWRFTHRGPFSVLKGG 180

Query: 193 KKVGNTKVMKNVANTSVLKWGEKLLCMWEGGEPYEMESGTLDTIGRYNMMDDCDLDDHEN 252
           KK+GNTKVMKNVANTSVL WG+KLLCMWEGG PYE+ESGTLDTIG++NM+D CD+DDH  
Sbjct: 181 KKIGNTKVMKNVANTSVLMWGKKLLCMWEGGNPYEIESGTLDTIGKFNMVDGCDMDDHNV 240

Query: 253 PGDHDVWDVAASLLKPILYGVFKMPPRRLLSHYKIDSVRSRLLTVSCNAEDMLLPRSHFT 312
               DVW+VAA+LLKPILYG+FKMPP+RLLSHYK+DS RSRLLTVSCNAEDMLLPRS FT
Sbjct: 241 NHGGDVWEVAATLLKPILYGIFKMPPKRLLSHYKVDSSRSRLLTVSCNAEDMLLPRSSFT 300

Query: 313 FSEYDSNFQLVQKQKFKIPDHLMIHDWAFTDTHYIVFANRIKLDIPGSMAAVYGTSPMIA 372
           F+EYD+NF+LV+KQ+FKIPDHLMIHDWAFTDTHYIVFANRIKLD+ GSM AV G SPMI+
Sbjct: 301 FTEYDNNFKLVEKQEFKIPDHLMIHDWAFTDTHYIVFANRIKLDVLGSMGAVCGASPMIS 360

Query: 373 ALKVNPSKSTSPIYLLPRFPENSKCKERDWRVPVEVPSQLWLIHVGNAFQVTHAHGNLDI 432
           AL VNPSKSTSPIYLLPRFP   + K+RDWR P+EVPSQLWL+HVGNAF+V  AHGNL+I
Sbjct: 361 ALTVNPSKSTSPIYLLPRFPNKPESKKRDWRKPLEVPSQLWLLHVGNAFEVKQAHGNLEI 420

Query: 433 QIQATACSYQWFNFRKLFGYNWQKQNLDPSIMNIEGDSELLPHLVQVSIRLDSDYNCQEC 492
           QIQA+ACSYQWFNFRKLFGYNWQ Q LDPSIMN++G++  LPHLVQVSI+LDSDYNCQEC
Sbjct: 421 QIQASACSYQWFNFRKLFGYNWQTQKLDPSIMNVKGENA-LPHLVQVSIKLDSDYNCQEC 479

Query: 493 DVKPMQKWKKSSDFPITNPAFSGKENRYLYAATTLGSRKSLPSFPFDTVVKLDLVSDSVQ 552
           DVKP+ KWKKS+DFP TNP+FSGK+N+YLYAATTLGSRK+LPSFPFDT+VK DLV++SV+
Sbjct: 480 DVKPINKWKKSADFPATNPSFSGKQNKYLYAATTLGSRKTLPSFPFDTIVKFDLVNNSVK 539

Query: 553 TWTVDSRKFIGEPIFVPKGDQEDDGYLLVVEYAVSKPRCYLVILNPR 599
            WT  SRKF+GEPIFVPKG++EDDGYLLVVEYA S  RC LVILNP+
Sbjct: 540 AWTAGSRKFVGEPIFVPKGEEEDDGYLLVVEYATSMQRCCLVILNPK 586