Miyakogusa Predicted Gene

Lj0g3v0135879.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0135879.1 Non Characterized Hit- tr|Q9SK70|Q9SK70_ARATH
Putative uncharacterized protein At2g20320
OS=Arabidop,51.58,3e-19,seg,NULL,17814_g.1
         (109 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g099030.1 | DENN (AEX-3) domain protein | HC | chr7:396806...   143   4e-35

>Medtr7g099030.1 | DENN (AEX-3) domain protein | HC |
           chr7:39680650-39688161 | 20130731
          Length = 831

 Score =  143 bits (360), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/108 (67%), Positives = 81/108 (75%), Gaps = 7/108 (6%)

Query: 3   VLHQLSEGAFRVAGEAWQNMYXXXXXXXXXXXXXMPQMGPG-AHRRCQSELVTKGFQRSS 61
           VL Q+SEGAFRVAGEA  +MY             +PQ+GP  AHRR +SE+VTKGFQRS 
Sbjct: 21  VLQQISEGAFRVAGEALHSMYSGAGGSS------LPQIGPSVAHRRSKSEIVTKGFQRSH 74

Query: 62  SFQKLKCHVQKAWRWSGRSRDENSLPNFNPEVMANQKRQWYQLHPKSM 109
           SFQKLK HVQKAW W G+SR+E   P FNPEVMANQKRQWYQLHPKSM
Sbjct: 75  SFQKLKVHVQKAWGWGGKSREEGLPPIFNPEVMANQKRQWYQLHPKSM 122