Miyakogusa Predicted Gene

Lj0g3v0129929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0129929.1 Non Characterized Hit- tr|I1IIY7|I1IIY7_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,47.52,2e-19,seg,NULL; APOPTOSIS INHIBITOR
5-RELATED,NULL,CUFF.7861.1
         (128 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g069290.1 | MLP3.11 protein | HC | chr5:29332432-29343493 ...   149   6e-37
Medtr5g096290.1 | DUF1296 family protein | HC | chr5:42099331-42...    80   6e-16

>Medtr5g069290.1 | MLP3.11 protein | HC | chr5:29332432-29343493 |
           20130731
          Length = 868

 Score =  149 bits (376), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 70/95 (73%), Positives = 78/95 (82%)

Query: 34  GMKYPLPPFKPGSNAANPTHLLMPNPYGVYGSSPAGYXXXXXXXXXXXXXXEDHGSSQFK 93
           GMKYPLPPFKPG+NAANP HL+MPN +G+YGSSPAGY              ED GSSQFK
Sbjct: 701 GMKYPLPPFKPGTNAANPAHLVMPNTFGIYGSSPAGYNHNSATTAGNSASNEDLGSSQFK 760

Query: 94  ESNVYISGEQSEGSAVWVAAPGRDINSLPTSSFYN 128
           E+NVYISG+QSEGSAVWVAAPGRD+N+LPTSSFYN
Sbjct: 761 ENNVYISGQQSEGSAVWVAAPGRDMNNLPTSSFYN 795


>Medtr5g096290.1 | DUF1296 family protein | HC |
           chr5:42099331-42107469 | 20130731
          Length = 773

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 2/95 (2%)

Query: 34  GMKYPLPPFKPGSNAANPTHLLMPNPYGVYGSSPAGYXXXXXXXXXXXXXXEDHGSSQFK 93
           G+K+PLP FK G+N+ N  H+ +P+  G Y + P GY              ED   SQ K
Sbjct: 610 GIKFPLPQFKAGANSGNMAHIGIPS--GSYITPPVGYAPSPTVNTGSSAGNEDTAVSQLK 667

Query: 94  ESNVYISGEQSEGSAVWVAAPGRDINSLPTSSFYN 128
           E+ +Y +G+ SEGSAVW+ APG+DI+ L  +S YN
Sbjct: 668 ENQIYTTGQLSEGSAVWIHAPGQDISGLQLNSLYN 702