Miyakogusa Predicted Gene

Lj0g3v0110929.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0110929.1 Non Characterized Hit- tr|I1ND38|I1ND38_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,30.58,0.000000000000001,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat,CUFF.6407.1
         (255 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:...   208   5e-54
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:...    65   5e-11
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:...    54   1e-07
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:...    54   1e-07
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:...    54   1e-07
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:...    52   4e-07
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:...    52   6e-07
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ...    52   6e-07
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:...    52   8e-07
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:...    52   8e-07
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:...    51   9e-07
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ...    51   1e-06
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ...    51   1e-06
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:...    51   1e-06
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ...    50   2e-06
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ...    50   2e-06
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:...    50   2e-06
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ...    50   3e-06
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ...    50   3e-06
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ...    49   3e-06
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:...    49   4e-06
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati...    49   4e-06
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:...    49   5e-06
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ...    49   6e-06

>Medtr1g033960.1 | PPR containing plant-like protein | HC |
           chr1:12282466-12279095 | 20130731
          Length = 745

 Score =  208 bits (529), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 118/223 (52%), Positives = 147/223 (65%), Gaps = 6/223 (2%)

Query: 34  KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPT-LTFD 92
           KA  L DE+   G +   V Y VLI+GL+KKARTREAKK+LL L Y     S P  +T++
Sbjct: 527 KALDLHDEMMQKGFLPDVVTYSVLINGLNKKARTREAKKLLLKLFY---DESVPNDVTYE 583

Query: 93  TLIENCSNNEFMSLVELVKGFRIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCK 152
           TLIENCS NEF S+V LVKGF ++ L +EA  V  TM Q N+KPDG VYN +I  HCR  
Sbjct: 584 TLIENCSGNEFKSVVGLVKGFCMKGLMDEADRVFETMHQRNFKPDGTVYNLIIHGHCRHG 643

Query: 153 NVDKAYDMYMEMVQCGFAPHMFSVLALIKTLYYGRRYNEMSWVIENTLRSCNLNDSELHK 212
           NV KAY+MY EMV CGF  HM +V+ALIK L      +E+S V++N L SC LND+EL K
Sbjct: 644 NVRKAYNMYTEMVHCGFVSHMVTVIALIKALSKEGMNDELSSVMQNILNSCTLNDAELSK 703

Query: 213 LLNEIGVRKGEFKEDALFNVLAEIAMDGLLLNGGKCSYAPASA 255
            L  I  ++G    D + N+L E+A +GLL +GG  S A ASA
Sbjct: 704 ALVRINFKEGHM--DVVLNLLTEMANNGLLPDGGDYSCASASA 744


>Medtr1g068960.1 | PPR containing plant-like protein | HC |
           chr1:29509792-29507424 | 20130731
          Length = 727

 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 18/166 (10%)

Query: 32  RLK-AKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPTLT 90
           RLK A  LL E+   G  R +V+Y+ LI GL K  R  +A+++   +   L   S  ++T
Sbjct: 427 RLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQM--ELLGVSRSSVT 484

Query: 91  FDTLIENCSNNEFMSLVELVKGFRIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCR 150
           ++TLI+            L K  R+     EA+ +++ M+    KPD   YN L+   CR
Sbjct: 485 YNTLIDG-----------LCKNKRVE----EASQLMDQMIMEGLKPDKFTYNSLLTYFCR 529

Query: 151 CKNVDKAYDMYMEMVQCGFAPHMFSVLALIKTLYYGRRYNEMSWVI 196
             +++KA D+   M   G  P +F+   LI  L    R +  S ++
Sbjct: 530 VGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLL 575


>Medtr1g011520.1 | PPR containing plant-like protein | HC |
           chr1:2060030-2064273 | 20130731
          Length = 587

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 21/158 (13%)

Query: 29  CWMRL--KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYHLCTTSW 86
           C MR   KA  ++ E+T  G    +++Y+ +I  L +  R +EA  M+    +H+     
Sbjct: 300 CRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMER--FHVLQIG- 356

Query: 87  PTLTFDTLIENCSNNEFMSLVELVKGF-RIRDLENEAASVLNTMLQGNYKPDGAVYNFLI 145
           PTL+              +   LVKGF +  D+E  A+ +L  M+   + P    YN+  
Sbjct: 357 PTLS--------------TYNSLVKGFCKAGDIEG-ASKILKKMISRGFLPIPTTYNYFF 401

Query: 146 VEHCRCKNVDKAYDMYMEMVQCGFAPHMFSVLALIKTL 183
               RC  VD+  ++Y +M++ G  P   +   ++K L
Sbjct: 402 RYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHLVLKML 439


>Medtr8g103480.2 | PPR containing plant-like protein | HC |
           chr8:43542427-43537111 | 20130731
          Length = 584

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 22/161 (13%)

Query: 28  ACWMRLK----AKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYHLCT 83
           A   RLK      +LL ++   G    S++++ +I+      +  EA K+   +    C 
Sbjct: 86  AALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKM--KECG 143

Query: 84  TSWPTLTFDTLIENCSNNEFMSLVELVKGFRIRDLENEAASVLNTMLQ-GNYKPDGAVYN 142
               T TF+TLI               KGF I    +EA  +L  M+Q GN KP+   YN
Sbjct: 144 CKPTTSTFNTLI---------------KGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYN 188

Query: 143 FLIVEHCRCKNVDKAYDMYMEMVQCGFAPHMFSVLALIKTL 183
            LI   C    +++A+++  +MV  G  P + +   L +  
Sbjct: 189 ILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAF 229


>Medtr8g103480.1 | PPR containing plant-like protein | HC |
           chr8:43542427-43537111 | 20130731
          Length = 584

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 22/161 (13%)

Query: 28  ACWMRLK----AKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYHLCT 83
           A   RLK      +LL ++   G    S++++ +I+      +  EA K+   +    C 
Sbjct: 86  AALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKM--KECG 143

Query: 84  TSWPTLTFDTLIENCSNNEFMSLVELVKGFRIRDLENEAASVLNTMLQ-GNYKPDGAVYN 142
               T TF+TLI               KGF I    +EA  +L  M+Q GN KP+   YN
Sbjct: 144 CKPTTSTFNTLI---------------KGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYN 188

Query: 143 FLIVEHCRCKNVDKAYDMYMEMVQCGFAPHMFSVLALIKTL 183
            LI   C    +++A+++  +MV  G  P + +   L +  
Sbjct: 189 ILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAF 229


>Medtr2g049740.1 | PPR containing plant-like protein | HC |
           chr2:22338668-22342717 | 20130731
          Length = 859

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 24/188 (12%)

Query: 34  KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPTLTFDT 93
           +A  L  E+   G  + +V ++ +ISGL K  +  EA  +   +       S   +T+ T
Sbjct: 490 RAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRM--KELGLSPDEITYRT 547

Query: 94  LIEN-CSNNEFMSLVE-------------------LVKG-FRIRDLENEAASVLNTMLQG 132
           L +  C N       +                   L+ G F+IR L N+   +L  M   
Sbjct: 548 LSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKL-NDVTDLLVEMQTR 606

Query: 133 NYKPDGAVYNFLIVEHCRCKNVDKAYDMYMEMVQCGFAPHMFSVLALIKTLYYGRRYNEM 192
              P+   Y  LI   C  + +DKA+ +Y EM++ GF P++     ++ +LY   R +E 
Sbjct: 607 GLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEA 666

Query: 193 SWVIENTL 200
           + +++  L
Sbjct: 667 TVILDKML 674


>Medtr8g102710.1 | PPR containing plant-like protein | HC |
           chr8:43240632-43242952 | 20130731
          Length = 520

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 19/179 (10%)

Query: 42  LTHFGDVRQSVI-YDVLISGLDKKARTREAKK---------MLLSLIYHLCTTSWPTLT- 90
           +  FG ++ S+I  D+L+  L KK   R+A++         +L +  Y +    W  +  
Sbjct: 170 MDEFG-IKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTKTYSILINGWGKIGD 228

Query: 91  -------FDTLIENCSNNEFMSLVELVKGFRIRDLENEAASVLNTMLQGNYKPDGAVYNF 143
                  FD ++E   + + ++   L++        +EA   LN ML    +PD   Y+ 
Sbjct: 229 SGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSI 288

Query: 144 LIVEHCRCKNVDKAYDMYMEMVQCGFAPHMFSVLALIKTLYYGRRYNEMSWVIENTLRS 202
            I  +C   NV  A+ +  +M +C   P++F+   +IK L   ++  E   +++  + S
Sbjct: 289 FIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISS 347


>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
           chr6:29098071-29100300 | 20130731
          Length = 590

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 20/177 (11%)

Query: 27  AACWMRL--KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREA----KKMLLSLI-- 78
           + C ++L  +A  L  E+   G     V Y  LISG     + ++A     KM+L  I  
Sbjct: 234 SMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKP 293

Query: 79  ----YHLCTTSW--------PTLTFDTLIENCSNNEFMSLVELVKGFRIRDLENEAASVL 126
               +++   ++            FD +++      F++   L+ G+ +    N+A S+ 
Sbjct: 294 DVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIF 353

Query: 127 NTMLQGNYKPDGAVYNFLIVEHCRCKNVDKAYDMYMEMVQCGFAPHMFSVLALIKTL 183
           NTM QG   PD   Y+ +I   C+ K  D+A +++ EM +    P + +  +LI  L
Sbjct: 354 NTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410


>Medtr7g007400.1 | PPR containing plant-like protein | HC |
           chr7:1471949-1474797 | 20130731
          Length = 636

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 42/93 (45%)

Query: 109 LVKGFRIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCKNVDKAYDMYMEMVQCG 168
           +V G   R    EA  +L    Q   KPD   YN L+ EHC+ +N+ +A  ++ +M++ G
Sbjct: 362 IVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIG 421

Query: 169 FAPHMFSVLALIKTLYYGRRYNEMSWVIENTLR 201
             P + S   LI       R  E     E  +R
Sbjct: 422 IQPDIHSYTTLIAVFCRENRMKESEMFFEEAVR 454


>Medtr7g405940.1 | PPR containing plant-like protein | HC |
           chr7:313415-311451 | 20130731
          Length = 654

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 41/93 (44%)

Query: 109 LVKGFRIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCKNVDKAYDMYMEMVQCG 168
           +V G   R    EA  +L    Q   KPD   YN L+ EHC+  N+ +A  ++ +MV+ G
Sbjct: 380 IVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQANIRQALVLFNKMVKSG 439

Query: 169 FAPHMFSVLALIKTLYYGRRYNEMSWVIENTLR 201
             P + S   LI       R  E     E  +R
Sbjct: 440 IQPDIHSYTTLIAVFCRENRMKESEMFFEEAVR 472


>Medtr4g068360.1 | PPR containing plant-like protein | HC |
           chr4:25633167-25630902 | 20130731
          Length = 624

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 55/218 (25%)

Query: 54  YDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPTLTFDTLIENCSNNEFMSLVELVKGF 113
           Y+  IS L K+ R  EA  +L  L+      +   +T++ LI+ C N       +L K F
Sbjct: 290 YNSFISRLCKERRIEEASGVLCKLLESGLVPN--AVTYNALIDGCCNKG-----DLDKAF 342

Query: 114 RIRD----------------------LEN---EAASVLNTMLQGNYKPDGAVYNFLIVEH 148
             RD                      LE    EA  ++  M +   +PD   YN  I  +
Sbjct: 343 AYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGY 402

Query: 149 CRCKNVDKAYDMYMEMVQCGFAPHMFSVLALIKTLYYGRRYNEMSWVIENTLRSCNLNDS 208
           CRC N  KA  ++ EMV+    P + +  +LI    +G+R N MS   E   +S      
Sbjct: 403 CRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDV--FGKR-NRMSEAEEKFKKS------ 453

Query: 209 ELHKLLNEIGVRKGEFKEDALFNVLAEIAMDGLLLNGG 246
                     +++G   +  +FN L    +DG  +NG 
Sbjct: 454 ----------IKEGMLPDIIMFNAL----IDGHCVNGN 477


>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
           chr6:29114944-29118519 | 20130731
          Length = 652

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 17/130 (13%)

Query: 54  YDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPTLTFDTLIENCSNNEFMSLVELVKGF 113
           +++L++   K  + +E K +                 FD +++      F++   L+ G+
Sbjct: 298 FNILVNAFCKDGKMKEGKTV-----------------FDMMMKQGIKPNFVTYNSLMDGY 340

Query: 114 RIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCKNVDKAYDMYMEMVQCGFAPHM 173
            +    N+A S+ NTM QG   PD   Y+ +I   C+ K  D+A +++ EM +    P +
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400

Query: 174 FSVLALIKTL 183
            +  +LI  L
Sbjct: 401 VTYSSLIDGL 410


>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:24933458-24936238 | 20130731
          Length = 614

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)

Query: 54  YDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPTLTFDTLIENCSNNEFMSLVELVKGF 113
           +++L+ GL K+   ++A+ +L                   +I+   ++  ++   L+ G+
Sbjct: 277 FNILVDGLCKEGEMKKARNVLA-----------------VMIKQGVDSNIVTYNSLMDGY 319

Query: 114 RIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCKNVDKAYDMYMEMVQCGFAPHM 173
            +   EN+A  V NTM +    PD   Y+ +I   C+ K VD+A +++ EM     AP+ 
Sbjct: 320 FLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNT 379

Query: 174 FSVLALIKTLY-YGR 187
            +  +LI  L  YGR
Sbjct: 380 VTYNSLIDGLLKYGR 394


>Medtr3g037490.1 | PPR containing plant-like protein | HC |
           chr3:13777398-13775665 | 20130731
          Length = 577

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 18/167 (10%)

Query: 34  KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPTLTFDT 93
           +AK L++E+   G    +V Y+ +I G  K     +A ++   +           +TF T
Sbjct: 316 EAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTER--KIEPNVITFST 373

Query: 94  LIENCSNNEFMSLVELVKGFRIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCKN 153
           LI+               GF  +     A  +   M+     PD   Y  LI  HC+ +N
Sbjct: 374 LID---------------GFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALIDGHCKVEN 418

Query: 154 VDKAYDMYMEMVQCGFAPHMFSVLALIKTLYY-GRRYNEMSWVIENT 199
              A++++ EM++ G  P++ +V +LI  L   G+ Y  +   +E T
Sbjct: 419 SKVAFELHKEMMEAGLTPNVVTVTSLIDGLLKEGKTYGAIKLFLEKT 465


>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
           chr8:45222711-45219784 | 20130731
          Length = 695

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 17/149 (11%)

Query: 35  AKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPTLTFDTL 94
            K LLDE+         V Y++LI  L K+ R  EA  +L+ ++      +   +T++ +
Sbjct: 389 VKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPN--IVTYNAM 446

Query: 95  IENCSNNEFMSLVELVKGFRIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCKNV 154
           ++               G+ +R+  N A  + N M++   +PD   YN LI  +C+ + V
Sbjct: 447 MD---------------GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMV 491

Query: 155 DKAYDMYMEMVQCGFAPHMFSVLALIKTL 183
           D+A  ++ EM      P + S  +LI  L
Sbjct: 492 DEAIVLFKEMRHKNLIPDIASYNSLIDGL 520


>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
           chr8:45222606-45220446 | 20130731
          Length = 704

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 17/149 (11%)

Query: 35  AKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPTLTFDTL 94
            K LLDE+         V Y++LI  L K+ R  EA  +L+ ++      +   +T++ +
Sbjct: 389 VKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPN--IVTYNAM 446

Query: 95  IENCSNNEFMSLVELVKGFRIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCKNV 154
           ++               G+ +R+  N A  + N M++   +PD   YN LI  +C+ + V
Sbjct: 447 MD---------------GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMV 491

Query: 155 DKAYDMYMEMVQCGFAPHMFSVLALIKTL 183
           D+A  ++ EM      P + S  +LI  L
Sbjct: 492 DEAIVLFKEMRHKNLIPDIASYNSLIDGL 520


>Medtr7g070420.1 | PPR containing plant-like protein | HC |
           chr7:25994193-25997035 | 20130731
          Length = 737

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 20/204 (9%)

Query: 33  LKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYH------------ 80
           ++   LL+E   FG       Y VL+  L +     +A+++L  ++Y             
Sbjct: 307 MRGYQLLEEGAEFGFSLCEHTYKVLVEALCRVLDVDKAREVLKLMLYKEGVDKTRIYNIY 366

Query: 81  ---LCTTSWPTLTFDTLI---ENCSNNEFMSLVELVKGFRIRDLENEAASVLNTMLQGNY 134
              LC  + PT   + L+   E+    + ++L  ++ GF      +EA  VLN ML G +
Sbjct: 367 LRALCHVNNPTELLNVLVFMLESHCQTDVITLNTVINGFCKMGRFDEALKVLNDMLLGKF 426

Query: 135 -KPDGAVYNFLIVEHCRCKNVDKAYDMYME-MVQCGFAPHMFSVLALIKTLYYGRRYNEM 192
             PD   +  LI      + VD+A D++   M + G  P + +   LI+ LY  +R N+ 
Sbjct: 427 CAPDVVTFTTLISGLLDAEKVDEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDA 486

Query: 193 SWVIENTLRSCNLNDSELHKLLNE 216
             V  N        DS  + ++ E
Sbjct: 487 FEVFNNMAGDGITPDSTTYTVIVE 510


>Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:24740195-24738748 | 20130731
          Length = 452

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 20/150 (13%)

Query: 54  YDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPTLTFDTLIENCSNNEFMSLVELVKGF 113
           +++L+ GL K+   ++A+ +L  +I    +     +T+++L++               G+
Sbjct: 192 FNILVDGLCKEGEMKKARNVLAVMIKQ--SVDPDVITYNSLMD---------------GY 234

Query: 114 RIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCKNVDKAYDMYMEMVQCGFAPHM 173
            +   EN+A  V NTM +    PD   Y+ +I   C+ K VD+A ++  EM     AP+ 
Sbjct: 235 FLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNT 294

Query: 174 FSVLALIKTLY-YGRRYNEMSWVIENTLRS 202
            +  +LI  L+  GR ++  +W + N + +
Sbjct: 295 VTYSSLIDGLHKSGRIFD--AWDLVNEMHN 322


>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
           chr6:29104928-29106782 | 20130731
          Length = 498

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 17/130 (13%)

Query: 54  YDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPTLTFDTLIENCSNNEFMSLVELVKGF 113
           +++L+ G  K  + +E K +                 F  +++       ++   L+ G+
Sbjct: 251 FNILVDGFCKDGKMKEGKTV-----------------FAMMMKQGIKPNVVTYCSLMDGY 293

Query: 114 RIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCKNVDKAYDMYMEMVQCGFAPHM 173
            +    N+A S+ NTM QG   PD   YN +I   C+ K VD+A +++ +M      P++
Sbjct: 294 CLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNV 353

Query: 174 FSVLALIKTL 183
            +  +LI  L
Sbjct: 354 VTYTSLIDGL 363


>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:29072402-29074378 | 20130731
          Length = 362

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 24/179 (13%)

Query: 27  AACWMRL--KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYHLCTT 84
           + C ++L  +A  L  E+   G     V Y  LISG     + ++A  +   +I  L   
Sbjct: 51  SMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMI--LENI 108

Query: 85  SWPTLTFDTLIEN-CSNNEF-------------------MSLVELVKGFRIRDLENEAAS 124
                TF+ L++  C + +                    ++   L+ G+ +    N+A S
Sbjct: 109 KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANS 168

Query: 125 VLNTMLQGNYKPDGAVYNFLIVEHCRCKNVDKAYDMYMEMVQCGFAPHMFSVLALIKTL 183
           + NTM QG   PD   YN +I   C+ K VD+A +++ +M      P++ +  +LI  L
Sbjct: 169 IFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGL 227


>Medtr3g114700.1 | PPR containing plant-like protein | HC |
           chr3:53562677-53565345 | 20130731
          Length = 530

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 42/233 (18%)

Query: 39  LDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPTLTFDTLIENC 98
            + +  +G     V + ++IS L KK R  EA+                 L FD+L ++ 
Sbjct: 201 FNRMEDYGCKPDKVSFSIVISSLCKKRRASEAE-----------------LFFDSL-KHK 242

Query: 99  SNNEFMSLVELVKGF-RIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCKNVDKA 157
              + +    LV G+ R  D+  +A  V + M +   KP+   Y+ +I   CRC  + +A
Sbjct: 243 FEPDVIVYTSLVHGWCRAGDIA-KAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRA 301

Query: 158 YDMYMEMVQCGFAPHMFSVLALIKTLYYGRR-------YNEM------------SWVIEN 198
           +D++ EM+  G  P+  +  +L++      R       YN+M            +++IE+
Sbjct: 302 HDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIES 361

Query: 199 TLRSCNLNDSELHKLLNEIGVRKGEFKEDALFNVLAEIAMDGLLLNGGKCSYA 251
             +  NL+  E  K+L+ + V+KG     + FN +     +   +NG    YA
Sbjct: 362 HCKDENLD--EAVKVLDTM-VKKGVAPNASTFNSIFGCIAELHDVNGAHRMYA 411


>Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putative
           | LC | chr6:29083748-29087017 | 20130731
          Length = 593

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 41/81 (50%)

Query: 108 ELVKGFRIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCKNVDKAYDMYMEMVQC 167
            L+ G+ +    N A S+ NTM QG   PD   YN LI   C+ K VDKA +++ EM   
Sbjct: 313 SLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCK 372

Query: 168 GFAPHMFSVLALIKTLYYGRR 188
              P++ +  +LI  L    R
Sbjct: 373 NIIPNVVTYNSLIDGLSKSGR 393


>Medtr1g055295.1 | PPR containing plant-like protein | HC |
           chr1:24439721-24443062 | 20130731
          Length = 1046

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 19/162 (11%)

Query: 33  LKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPTLTFD 92
           L A+  +D L  FG     + Y + I  L +  +  EA K++                 +
Sbjct: 817 LDARKCIDSLQRFG-YTVPLCYSLFIRALCRAGKVEEALKLV-----------------E 858

Query: 93  TLIENCSNNEFMSLVELVKGFRIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCK 152
            +     N E ++   +V G   +    EA + ++ M Q    P   VY  LIV   + K
Sbjct: 859 EVGAEKINVEKLTYGSIVHGLLQKGKLEEALTKVSRMKQEGITPTIHVYTSLIVHFFKQK 918

Query: 153 NVDKAYDMYMEMVQCGFAPHMFSVLALIKTLYYGRRYNEMSW 194
           +V+KA  +Y EM++ G+ P++ +  ALI+      RYN+ +W
Sbjct: 919 HVEKAIQIYAEMLESGYEPNVVTYSALIRGYMNVGRYND-AW 959


>Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:35125926-35130110 | 20130731
          Length = 608

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 19/148 (12%)

Query: 34  KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTREAKKMLLSLIYHLCTTSWPTLTFDT 93
           +A +LLDE+   G +      ++L+  L K+ +  +AK ++  +I  L        T+++
Sbjct: 285 EAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMI--LVGEVPDVFTYNS 342

Query: 94  LIEN-CSNNEFMSLVELVKGFRIRDLENEAASVLNTMLQGNYKPDGAVYNFLIVEHCRCK 152
           LI+  C  N+                 +EA  V   M+     PD   Y  LI   C+ K
Sbjct: 343 LIDRYCLQNQM----------------DEATRVFELMVSRGCLPDIVAYTSLIHGWCKIK 386

Query: 153 NVDKAYDMYMEMVQCGFAPHMFSVLALI 180
           N++KA  +  EM++ GF P + +   LI
Sbjct: 387 NINKAMHLLDEMIKVGFTPDVVTWTTLI 414